RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 MCOLN2Q8IZK6 566 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 EXD1Q8NHP7 514 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 SPATA18Q8TC71 538 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 APOL6Q9BWW8 343 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 C2orf40Q9H1Z8 148 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 ACP6Q9NPH0 428 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 KCNQ5Q9NR82 932 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 SMYD2Q9NRG4 433 aa8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 XPO7Q9UIA9 1087 aaKnown RBP8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 MAGED2Q9UNF1 606 aaPredicted RBP8.64□□□□□ -1.03
PRKAB1-207ENST00000542698 GIPC1O14908 333 aa8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 PPP1R11O60927 126 aaPredicted RBP8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 NOL3O60936 208 aaKnown RBP8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 CRCPO75575 148 aa8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 PSMD10O75832 226 aa8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 DRD4P21917 467 aa8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 GARTP22102 1010 aa8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 HOXA10P31260 410 aaPredicted RBP8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 ERFP50548 548 aa8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 AP2B1P63010 937 aa8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 DLG4P78352 724 aa8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 KDSRQ06136 332 aa8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 MTMR2Q13614 643 aa8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 RPS6KA2Q15349 733 aa8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 CLEC16AQ2KHT3 1053 aa8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 MMEL1Q495T6 779 aa8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 RASGEF1CQ8N431 466 aa8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 RDM1Q8NG50 284 aa8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 OR6B3Q8NGW1 331 aa8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 CCT6BQ92526 530 aa8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 IDI2Q9BXS1 227 aa8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 MANSC1Q9H8J5 431 aa8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 ATF5Q9Y2D1 282 aaPredicted RBP8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 PHRF1Q9P1Y6 1649 aaKnown RBP8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 MYH2Q9UKX2 1941 aa8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 CCDC195A0A1B0GUA6 201 aa8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 TISP43B9A030 160 aa8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 NFIBO00712 420 aa8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 DNAJC8O75937 253 aaPredicted RBP8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 PDGFRAP16234 1089 aa8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 MARCKSL1P49006 195 aa8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 EMC2Q15006 297 aa8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 SLC9A9Q8IVB4 645 aa8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 PPIL6Q8IXY8 311 aa8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 LRRC57Q8N9N7 239 aa8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 DNAJC9Q8WXX5 260 aa8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 DCLK3Q9C098 648 aa8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 CHST7Q9NS84 486 aa8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 ZC3H7BQ9UGR2 993 aaKnown RBP8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 FBXO40Q9UH90 709 aa8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 SSX2IPQ9Y2D8 614 aa8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 MTO1Q9Y2Z2 717 aaKnown RBP8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 SMAPO00193 183 aa8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 XPOTO43592 962 aaKnown RBP8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 GMNNO75496 209 aa8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 VIL1P09327 827 aaKnown RBP8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 CAP2P40123 477 aa8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 GABPAQ06546 454 aa8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 CYP24A1Q07973 514 aa8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 OVGP1Q12889 678 aa8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 PTK7Q13308 1070 aa8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 CNGA2Q16280 664 aa8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 XRRA1Q6P2D8 792 aa8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 RSBN1LQ6PCB5 846 aaPredicted RBP8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 NLRP9Q7RTR0 991 aa8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 KIRREL3Q8IZU9 778 aa8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 NLRP7Q8WX94 980 aa8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 ACSF2Q96CM8 615 aaPredicted RBP8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 STAMBPL1Q96FJ0 436 aa8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 SERPINI1Q99574 410 aa8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 TEX13BQ9BXU2 312 aa8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 VPS11Q9H270 941 aa8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 SNX25Q9H3E2 840 aa8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 FAM96AQ9H5X1 160 aa8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 LRRC4Q9HBW1 653 aa8.63□□□□□ -1.03
PRKAB1-207ENST00000542698 ROBO3Q96MS0 1386 aa8.62□□□□□ -1.03
PRKAB1-207ENST00000542698 CASQ2O14958 399 aaPredicted RBP8.62□□□□□ -1.03
PRKAB1-207ENST00000542698 CFLARO15519 480 aa8.62□□□□□ -1.03
PRKAB1-207ENST00000542698 KCNN4O15554 427 aa8.62□□□□□ -1.03
PRKAB1-207ENST00000542698 TM4SF1P30408 202 aa8.62□□□□□ -1.03
PRKAB1-207ENST00000542698 CTCFP49711 727 aaPredicted RBP8.62□□□□□ -1.03
PRKAB1-207ENST00000542698 ELF3P78545 371 aaPredicted RBP8.62□□□□□ -1.03
PRKAB1-207ENST00000542698 QPCTQ16769 361 aa8.62□□□□□ -1.03
PRKAB1-207ENST00000542698 TFDP3Q5H9I0 405 aa8.62□□□□□ -1.03
PRKAB1-207ENST00000542698 HEATR6Q6AI08 1181 aaKnown RBP8.62□□□□□ -1.03
PRKAB1-207ENST00000542698 ST13P4Q8IZP2 240 aaPredicted RBP8.62□□□□□ -1.03
PRKAB1-207ENST00000542698 IKZF4Q9H2S9 585 aa8.62□□□□□ -1.03
PRKAB1-207ENST00000542698 ABCF3Q9NUQ8 709 aa8.62□□□□□ -1.03
PRKAB1-207ENST00000542698 NDE1Q9NXR1 346 aa8.62□□□□□ -1.03
PRKAB1-207ENST00000542698 EPS15L1Q9UBC2 864 aa8.62□□□□□ -1.03
PRKAB1-207ENST00000542698 NCANO14594 1321 aa8.62□□□□□ -1.03
PRKAB1-207ENST00000542698 B2RBV5 119 aa8.62□□□□□ -1.03
PRKAB1-207ENST00000542698 NVLO15381 856 aaKnown RBP8.62□□□□□ -1.03
PRKAB1-207ENST00000542698 HSPA4LO95757 839 aa8.62□□□□□ -1.03
PRKAB1-207ENST00000542698 ENO1P06733 434 aaKnown RBP8.62□□□□□ -1.03
PRKAB1-207ENST00000542698 HMGCS2P54868 508 aa8.62□□□□□ -1.03
PRKAB1-207ENST00000542698 TPD52P55327 224 aaPredicted RBP8.62□□□□□ -1.03
PRKAB1-207ENST00000542698 GCNT1Q02742 428 aa8.62□□□□□ -1.03
PRKAB1-207ENST00000542698 MORF4L2Q15014 288 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms