RNA–Protein interactions for RNA: ENST00000542687.1

MRPL40P1-201, Transcript of mitochondrial ribosomal protein L40 pseudogene 1, humanhuman

BASIC

Gene MRPL40P1, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40P1-201ENST00000542687 LRRC8AQ8IWT6 810 aa8.59□□□□□ -1.03
MRPL40P1-201ENST00000542687 TOP6BLQ8N6T0 577 aa8.59□□□□□ -1.03
MRPL40P1-201ENST00000542687 CCDC112Q8NEF3 446 aa8.59□□□□□ -1.03
MRPL40P1-201ENST00000542687 APPL2Q8NEU8 664 aa8.59□□□□□ -1.03
MRPL40P1-201ENST00000542687 SHC3Q92529 594 aa8.59□□□□□ -1.03
MRPL40P1-201ENST00000542687 ZNF689Q96CS4 500 aaPredicted RBP8.59□□□□□ -1.03
MRPL40P1-201ENST00000542687 TRIM44Q96DX7 344 aaPredicted RBP8.59□□□□□ -1.03
MRPL40P1-201ENST00000542687 SENP8Q96LD8 212 aa8.59□□□□□ -1.03
MRPL40P1-201ENST00000542687 RAD9AQ99638 391 aa8.59□□□□□ -1.03
MRPL40P1-201ENST00000542687 ARID3AQ99856 593 aa8.59□□□□□ -1.03
MRPL40P1-201ENST00000542687 BAG1Q99933 345 aaPredicted RBP8.59□□□□□ -1.03
MRPL40P1-201ENST00000542687 PAAF1Q9BRP4 392 aa8.59□□□□□ -1.03
MRPL40P1-201ENST00000542687 BCO2Q9BYV7 579 aa8.59□□□□□ -1.03
MRPL40P1-201ENST00000542687 SNX25Q9H3E2 840 aa8.59□□□□□ -1.03
MRPL40P1-201ENST00000542687 SMYD3Q9H7B4 428 aa8.59□□□□□ -1.03
MRPL40P1-201ENST00000542687 CISHQ9NSE2 258 aa8.59□□□□□ -1.03
MRPL40P1-201ENST00000542687 DNAJB4Q9UDY4 337 aa8.59□□□□□ -1.03
MRPL40P1-201ENST00000542687 INSL6Q9Y581 213 aa8.59□□□□□ -1.03
MRPL40P1-201ENST00000542687 BZW2Q9Y6E2 419 aaKnown RBP8.59□□□□□ -1.03
MRPL40P1-201ENST00000542687 TMEM189-UBE2V1I3L0A0 370 aa8.58□□□□□ -1.04
MRPL40P1-201ENST00000542687 CYP26A1O43174 497 aa8.58□□□□□ -1.04
MRPL40P1-201ENST00000542687 B4GALT3O60512 393 aa8.58□□□□□ -1.04
MRPL40P1-201ENST00000542687 TACC1O75410 805 aa8.58□□□□□ -1.04
MRPL40P1-201ENST00000542687 KIF4AO95239 1232 aa8.58□□□□□ -1.04
MRPL40P1-201ENST00000542687 SERPING1P05155 500 aa8.58□□□□□ -1.04
MRPL40P1-201ENST00000542687 ODC1P11926 461 aa8.58□□□□□ -1.04
MRPL40P1-201ENST00000542687 SKILP12757 684 aa8.58□□□□□ -1.04
MRPL40P1-201ENST00000542687 GNL1P36915 607 aaPredicted RBP8.58□□□□□ -1.04
MRPL40P1-201ENST00000542687 RAP1GAPP47736 663 aa8.58□□□□□ -1.04
MRPL40P1-201ENST00000542687 SLC11A1P49279 550 aa8.58□□□□□ -1.04
MRPL40P1-201ENST00000542687 BCAR1P56945 870 aa8.58□□□□□ -1.04
MRPL40P1-201ENST00000542687 CDK17Q00537 523 aa8.58□□□□□ -1.04
MRPL40P1-201ENST00000542687 PTK2Q05397 1052 aa8.58□□□□□ -1.04
MRPL40P1-201ENST00000542687 KLHL30Q0D2K2 578 aa8.58□□□□□ -1.04
MRPL40P1-201ENST00000542687 SOWAHAQ2M3V2 549 aa8.58□□□□□ -1.04
MRPL40P1-201ENST00000542687 TIGD5Q53EQ6 642 aa8.58□□□□□ -1.04
MRPL40P1-201ENST00000542687 CYP26C1Q6V0L0 522 aa8.58□□□□□ -1.04
MRPL40P1-201ENST00000542687 CHRDL2Q6WN34 429 aa8.58□□□□□ -1.04
MRPL40P1-201ENST00000542687 IRF2BP2Q7Z5L9 587 aa8.58□□□□□ -1.04
MRPL40P1-201ENST00000542687 FAM71AQ8IYT1 594 aa8.58□□□□□ -1.04
MRPL40P1-201ENST00000542687 TMEM86AQ8N2M4 240 aa8.58□□□□□ -1.04
MRPL40P1-201ENST00000542687 FIBCD1Q8N539 461 aa8.58□□□□□ -1.04
MRPL40P1-201ENST00000542687 C3orf58Q8NDZ4 430 aa8.58□□□□□ -1.04
MRPL40P1-201ENST00000542687 OR6B3Q8NGW1 331 aa8.58□□□□□ -1.04
MRPL40P1-201ENST00000542687 RNPC3Q96LT9 517 aaKnown RBP8.58□□□□□ -1.04
MRPL40P1-201ENST00000542687 UBE2OQ9C0C9 1292 aaKnown RBP8.58□□□□□ -1.04
MRPL40P1-201ENST00000542687 GPR88Q9GZN0 384 aa8.58□□□□□ -1.04
MRPL40P1-201ENST00000542687 SDCBP2Q9H190 292 aa8.58□□□□□ -1.04
MRPL40P1-201ENST00000542687 AAASQ9NRG9 546 aa8.58□□□□□ -1.04
MRPL40P1-201ENST00000542687 ADAM28Q9UKQ2 775 aa8.58□□□□□ -1.04
MRPL40P1-201ENST00000542687 DSEQ9UL01 958 aa8.58□□□□□ -1.04
MRPL40P1-201ENST00000542687 BARX2Q9UMQ3 279 aaPredicted RBP8.58□□□□□ -1.04
MRPL40P1-201ENST00000542687 COLQQ9Y215 455 aaPredicted RBP8.58□□□□□ -1.04
MRPL40P1-201ENST00000542687 LAMA3Q16787 3333 aa8.58□□□□□ -1.04
MRPL40P1-201ENST00000542687 A8MXQ7 604 aa8.57□□□□□ -1.04
MRPL40P1-201ENST00000542687 TLL1O43897 1013 aa8.57□□□□□ -1.04
MRPL40P1-201ENST00000542687 PAEPP09466 180 aa8.57□□□□□ -1.04
MRPL40P1-201ENST00000542687 PNMA6AP0CW24 399 aaPredicted RBP8.57□□□□□ -1.04
MRPL40P1-201ENST00000542687 LAG3P18627 525 aa8.57□□□□□ -1.04
MRPL40P1-201ENST00000542687 IGFBP6P24592 240 aaPredicted RBP8.57□□□□□ -1.04
MRPL40P1-201ENST00000542687 CLCN1P35523 988 aa8.57□□□□□ -1.04
MRPL40P1-201ENST00000542687 BRCC3P46736 316 aa8.57□□□□□ -1.04
MRPL40P1-201ENST00000542687 LHX1P48742 406 aa8.57□□□□□ -1.04
MRPL40P1-201ENST00000542687 AARSP49588 968 aaKnown RBP eCLIP8.57□□□□□ -1.04
MRPL40P1-201ENST00000542687 NDST1P52848 882 aa8.57□□□□□ -1.04
MRPL40P1-201ENST00000542687 HTRA4P83105 476 aaPredicted RBP8.57□□□□□ -1.04
MRPL40P1-201ENST00000542687 INCA1Q0VD86 236 aa8.57□□□□□ -1.04
MRPL40P1-201ENST00000542687 ELAVL2Q12926 359 aaKnown RBP8.57□□□□□ -1.04
MRPL40P1-201ENST00000542687 SHHQ15465 462 aa8.57□□□□□ -1.04
MRPL40P1-201ENST00000542687 MEA1Q16626 185 aa8.57□□□□□ -1.04
MRPL40P1-201ENST00000542687 ZNF394Q53GI3 561 aa8.57□□□□□ -1.04
MRPL40P1-201ENST00000542687 HS1BP3Q53T59 392 aa8.57□□□□□ -1.04
MRPL40P1-201ENST00000542687 TDRD12Q587J7 1177 aaKnown RBP8.57□□□□□ -1.04
MRPL40P1-201ENST00000542687 RASIP1Q5U651 963 aa8.57□□□□□ -1.04
MRPL40P1-201ENST00000542687 WSCD1Q658N2 575 aa8.57□□□□□ -1.04
MRPL40P1-201ENST00000542687 WDR59Q6PJI9 974 aa8.57□□□□□ -1.04
MRPL40P1-201ENST00000542687 KCNT2Q6UVM3 1135 aa8.57□□□□□ -1.04
MRPL40P1-201ENST00000542687 CD300LGQ6UXG3 332 aa8.57□□□□□ -1.04
MRPL40P1-201ENST00000542687 LIMS2Q7Z4I7 341 aa8.57□□□□□ -1.04
MRPL40P1-201ENST00000542687 VPS36Q86VN1 386 aa8.57□□□□□ -1.04
MRPL40P1-201ENST00000542687 UNC93AQ86WB7 457 aa8.57□□□□□ -1.04
MRPL40P1-201ENST00000542687 GPIHBP1Q8IV16 184 aa8.57□□□□□ -1.04
MRPL40P1-201ENST00000542687 ADGRF2Q8IZF7 708 aa8.57□□□□□ -1.04
MRPL40P1-201ENST00000542687 THEM5Q8N1Q8 247 aa8.57□□□□□ -1.04
MRPL40P1-201ENST00000542687 PDCL2Q8N4E4 241 aa8.57□□□□□ -1.04
MRPL40P1-201ENST00000542687 UBR7Q8N806 425 aa8.57□□□□□ -1.04
MRPL40P1-201ENST00000542687 RBBP8NLQ8NC74 664 aaPredicted RBP8.57□□□□□ -1.04
MRPL40P1-201ENST00000542687 SPATA18Q8TC71 538 aa8.57□□□□□ -1.04
MRPL40P1-201ENST00000542687 HASPINQ8TF76 798 aa8.57□□□□□ -1.04
MRPL40P1-201ENST00000542687 TMEM176AQ96HP8 235 aa8.57□□□□□ -1.04
MRPL40P1-201ENST00000542687 SUSD3Q96L08 255 aa8.57□□□□□ -1.04
MRPL40P1-201ENST00000542687 CCDC42Q96M95 316 aa8.57□□□□□ -1.04
MRPL40P1-201ENST00000542687 ZNF830Q96NB3 372 aaPredicted RBP8.57□□□□□ -1.04
MRPL40P1-201ENST00000542687 ZNF558Q96NG5 402 aa8.57□□□□□ -1.04
MRPL40P1-201ENST00000542687 MRPL45Q9BRJ2 306 aaKnown RBP8.57□□□□□ -1.04
MRPL40P1-201ENST00000542687 NT5C1AQ9BXI3 368 aa8.57□□□□□ -1.04
MRPL40P1-201ENST00000542687 DEF6Q9H4E7 631 aa8.57□□□□□ -1.04
MRPL40P1-201ENST00000542687 HAUS4Q9H6D7 363 aa8.57□□□□□ -1.04
MRPL40P1-201ENST00000542687 CWH43Q9H720 699 aa8.57□□□□□ -1.04
MRPL40P1-201ENST00000542687 RC3H2Q9HBD1 1191 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms