RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 NDC1Q9BTX1 674 aa6.62□□□□□ -1.35
XRCC4-206ENST00000542685 UBXN6Q9BZV1 441 aa6.62□□□□□ -1.35
XRCC4-206ENST00000542685 KCNH6Q9H252 994 aa6.62□□□□□ -1.35
XRCC4-206ENST00000542685 IFT22Q9H7X7 185 aa6.62□□□□□ -1.35
XRCC4-206ENST00000542685 STK26Q9P289 416 aa6.62□□□□□ -1.35
XRCC4-206ENST00000542685 SPAG9O60271 1321 aaKnown RBP6.61□□□□□ -1.35
XRCC4-206ENST00000542685 A0A087WUV0 522 aaPredicted RBP6.61□□□□□ -1.35
XRCC4-206ENST00000542685 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.61□□□□□ -1.35
XRCC4-206ENST00000542685 AHRRA9YTQ3 701 aa6.61□□□□□ -1.35
XRCC4-206ENST00000542685 IPO8O15397 1037 aaKnown RBP6.61□□□□□ -1.35
XRCC4-206ENST00000542685 TMEM127O75204 238 aa6.61□□□□□ -1.35
XRCC4-206ENST00000542685 ITGA10O75578 1167 aa6.61□□□□□ -1.35
XRCC4-206ENST00000542685 ABHD16AO95870 558 aa6.61□□□□□ -1.35
XRCC4-206ENST00000542685 ITGB1P05556 798 aa6.61□□□□□ -1.35
XRCC4-206ENST00000542685 HNRNPMP52272 730 aaKnown RBP eCLIP6.61□□□□□ -1.35
XRCC4-206ENST00000542685 RBM6P78332 1123 aaKnown RBP6.61□□□□□ -1.35
XRCC4-206ENST00000542685 NEDD9Q14511 834 aa6.61□□□□□ -1.35
XRCC4-206ENST00000542685 PTPAQ15257 358 aa6.61□□□□□ -1.35
XRCC4-206ENST00000542685 UGT8Q16880 541 aa6.61□□□□□ -1.35
XRCC4-206ENST00000542685 PLEKHG4Q58EX7 1191 aa6.61□□□□□ -1.35
XRCC4-206ENST00000542685 HSP90B2PQ58FF3 399 aa6.61□□□□□ -1.35
XRCC4-206ENST00000542685 LY6G5CQ5SRR4 150 aa6.61□□□□□ -1.35
XRCC4-206ENST00000542685 KCNV1Q6PIU1 500 aa6.61□□□□□ -1.35
XRCC4-206ENST00000542685 PCSK4Q6UW60 755 aa6.61□□□□□ -1.35
XRCC4-206ENST00000542685 RHOUQ7L0Q8 258 aa6.61□□□□□ -1.35
XRCC4-206ENST00000542685 DNAAF4Q8WXU2 420 aa6.61□□□□□ -1.35
XRCC4-206ENST00000542685 TTC1Q99614 292 aa6.61□□□□□ -1.35
XRCC4-206ENST00000542685 ZSCAN16Q9H4T2 348 aaPredicted RBP6.61□□□□□ -1.35
XRCC4-206ENST00000542685 TRPM5Q9NZQ8 1165 aa6.61□□□□□ -1.35
XRCC4-206ENST00000542685 TBX22Q9Y458 520 aa6.61□□□□□ -1.35
XRCC4-206ENST00000542685 KIF20BQ96Q89 1820 aa6.61□□□□□ -1.35
XRCC4-206ENST00000542685 GLI2P10070 1586 aa6.61□□□□□ -1.35
XRCC4-206ENST00000542685 HECW2Q9P2P5 1572 aa6.61□□□□□ -1.35
XRCC4-206ENST00000542685 ATXN2Q99700 1313 aaKnown RBP6.6□□□□□ -1.35
XRCC4-206ENST00000542685 LEFTY2O00292 366 aa6.6□□□□□ -1.35
XRCC4-206ENST00000542685 SLU7O95391 586 aaKnown RBP6.6□□□□□ -1.35
XRCC4-206ENST00000542685 PRPHP41219 470 aa6.6□□□□□ -1.35
XRCC4-206ENST00000542685 MEF2AQ02078 507 aaPredicted RBP6.6□□□□□ -1.35
XRCC4-206ENST00000542685 RBBP5Q15291 538 aaKnown RBP6.6□□□□□ -1.35
XRCC4-206ENST00000542685 KRTAP15-1Q3LI76 137 aa6.6□□□□□ -1.35
XRCC4-206ENST00000542685 TIGD2Q4W5G0 525 aa6.6□□□□□ -1.35
XRCC4-206ENST00000542685 MBNL2Q5VZF2 373 aaKnown RBP6.6□□□□□ -1.35
XRCC4-206ENST00000542685 LRRC55Q6ZSA7 311 aa6.6□□□□□ -1.35
XRCC4-206ENST00000542685 RNF180Q86T96 592 aa6.6□□□□□ -1.35
XRCC4-206ENST00000542685 ANKRD18AQ8IVF6 992 aa6.6□□□□□ -1.35
XRCC4-206ENST00000542685 CLRN3Q8NCR9 226 aa6.6□□□□□ -1.35
XRCC4-206ENST00000542685 MDM1Q8TC05 714 aa6.6□□□□□ -1.35
XRCC4-206ENST00000542685 SNX33Q8WV41 574 aa6.6□□□□□ -1.35
XRCC4-206ENST00000542685 TCP11Q8WWU5 503 aa6.6□□□□□ -1.35
XRCC4-206ENST00000542685 ZG16BQ96DA0 208 aa6.6□□□□□ -1.35
XRCC4-206ENST00000542685 SPATS2LQ9NUQ6 558 aaKnown RBP6.6□□□□□ -1.35
XRCC4-206ENST00000542685 GNL3LQ9NVN8 582 aaKnown RBP6.6□□□□□ -1.35
XRCC4-206ENST00000542685 DDX19BQ9UMR2 479 aa6.6□□□□□ -1.35
XRCC4-206ENST00000542685 PTCH1Q13635 1447 aa6.59□□□□□ -1.35
XRCC4-206ENST00000542685 KIF24Q5T7B8 1368 aa6.59□□□□□ -1.35
XRCC4-206ENST00000542685 ZEB2O60315 1214 aa6.59□□□□□ -1.35
XRCC4-206ENST00000542685 PPFIA2O75334 1257 aa6.59□□□□□ -1.35
XRCC4-206ENST00000542685 ULK1O75385 1050 aa6.59□□□□□ -1.35
XRCC4-206ENST00000542685 PNMA6AP0CW24 399 aaPredicted RBP6.59□□□□□ -1.35
XRCC4-206ENST00000542685 GCFC2P16383 781 aaKnown RBP6.59□□□□□ -1.35
XRCC4-206ENST00000542685 LAG3P18627 525 aa6.59□□□□□ -1.35
XRCC4-206ENST00000542685 CTSSP25774 331 aa6.59□□□□□ -1.35
XRCC4-206ENST00000542685 ZFP36P26651 326 aaKnown RBP6.59□□□□□ -1.35
XRCC4-206ENST00000542685 RDXP35241 583 aaKnown RBP6.59□□□□□ -1.35
XRCC4-206ENST00000542685 MRPL12P52815 198 aaKnown RBP6.59□□□□□ -1.35
XRCC4-206ENST00000542685 SESN3P58005 492 aa6.59□□□□□ -1.35
XRCC4-206ENST00000542685 FAM189BP81408 668 aa6.59□□□□□ -1.35
XRCC4-206ENST00000542685 DDR1Q08345 913 aa6.59□□□□□ -1.35
XRCC4-206ENST00000542685 C19orf54Q5BKX5 351 aa6.59□□□□□ -1.35
XRCC4-206ENST00000542685 BMP2KLQ5H9B9 411 aa6.59□□□□□ -1.35
XRCC4-206ENST00000542685 ZKSCAN2Q63HK3 967 aa6.59□□□□□ -1.35
XRCC4-206ENST00000542685 ANKS6Q68DC2 871 aa6.59□□□□□ -1.35
XRCC4-206ENST00000542685 FBXO38Q6PIJ6 1188 aa6.59□□□□□ -1.35
XRCC4-206ENST00000542685 STRA8Q7Z7C7 330 aa6.59□□□□□ -1.35
XRCC4-206ENST00000542685 TADA2BQ86TJ2 420 aa6.59□□□□□ -1.35
XRCC4-206ENST00000542685 THNSL2Q86YJ6 484 aa6.59□□□□□ -1.35
XRCC4-206ENST00000542685 LILRA3Q8N6C8 439 aaPredicted RBP6.59□□□□□ -1.35
XRCC4-206ENST00000542685 GPT2Q8TD30 523 aa6.59□□□□□ -1.35
XRCC4-206ENST00000542685 CLIP2Q9UDT6 1046 aa6.59□□□□□ -1.35
XRCC4-206ENST00000542685 DPP7Q9UHL4 492 aa6.59□□□□□ -1.35
XRCC4-206ENST00000542685 SMC3Q9UQE7 1217 aa6.59□□□□□ -1.35
XRCC4-206ENST00000542685 UGGT1Q9NYU2 1555 aa6.59□□□□□ -1.35
XRCC4-206ENST00000542685 ZFYVE9O95405 1425 aa6.59□□□□□ -1.36
XRCC4-206ENST00000542685 NSD3Q9BZ95 1437 aa6.59□□□□□ -1.36
XRCC4-206ENST00000542685 TUBGCP6Q96RT7 1819 aa6.58□□□□□ -1.36
XRCC4-206ENST00000542685 A0A1B0GUA9 196 aa6.58□□□□□ -1.36
XRCC4-206ENST00000542685 SYCE3A1L190 88 aa6.58□□□□□ -1.36
XRCC4-206ENST00000542685 EIF3CLB5ME19 914 aaKnown RBP6.58□□□□□ -1.36
XRCC4-206ENST00000542685 PPFIA4O75335 1185 aa6.58□□□□□ -1.36
XRCC4-206ENST00000542685 ZRANB2O95218 330 aaKnown RBP eCLIP6.58□□□□□ -1.36
XRCC4-206ENST00000542685 ADCY5O95622 1261 aa6.58□□□□□ -1.36
XRCC4-206ENST00000542685 TNNT1P13805 278 aa6.58□□□□□ -1.36
XRCC4-206ENST00000542685 PAX7P23759 505 aa6.58□□□□□ -1.36
XRCC4-206ENST00000542685 CDK17Q00537 523 aa6.58□□□□□ -1.36
XRCC4-206ENST00000542685 CSRP2Q16527 193 aa6.58□□□□□ -1.36
XRCC4-206ENST00000542685 FSCN1Q16658 493 aaKnown RBP6.58□□□□□ -1.36
XRCC4-206ENST00000542685 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.58□□□□□ -1.36
XRCC4-206ENST00000542685 ALDH1L2Q3SY69 923 aa6.58□□□□□ -1.36
XRCC4-206ENST00000542685 DNAJC21Q5F1R6 531 aaKnown RBP6.58□□□□□ -1.36
XRCC4-206ENST00000542685 IQSEC1Q6DN90 963 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms