RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 CCDC93Q567U6 631 aa4.68□□□□□ -1.66
LEMD3-204ENST00000542032 CERS3Q8IU89 383 aa4.68□□□□□ -1.66
LEMD3-204ENST00000542032 MIER2Q8N344 545 aa4.68□□□□□ -1.66
LEMD3-204ENST00000542032 PDPRQ8NCN5 879 aa4.68□□□□□ -1.66
LEMD3-204ENST00000542032 CAGE1Q8TC20 777 aa4.68□□□□□ -1.66
LEMD3-204ENST00000542032 POC1BQ8TC44 478 aa4.68□□□□□ -1.66
LEMD3-204ENST00000542032 SCAMP4Q969E2 229 aa4.68□□□□□ -1.66
LEMD3-204ENST00000542032 SMAD5Q99717 465 aaKnown RBP4.68□□□□□ -1.66
LEMD3-204ENST00000542032 GPR35Q9HC97 309 aa4.68□□□□□ -1.66
LEMD3-204ENST00000542032 HOMER2Q9NSB8 354 aa4.68□□□□□ -1.66
LEMD3-204ENST00000542032 DMTF1Q9Y222 760 aa4.68□□□□□ -1.66
LEMD3-204ENST00000542032 CDYLQ9Y232 598 aa4.68□□□□□ -1.66
LEMD3-204ENST00000542032 POLHQ9Y253 713 aa4.68□□□□□ -1.66
LEMD3-204ENST00000542032 LRRC14BA6NHZ5 514 aa4.67□□□□□ -1.66
LEMD3-204ENST00000542032 C1QL1O75973 258 aa4.67□□□□□ -1.66
LEMD3-204ENST00000542032 ARIH2O95376 493 aa4.67□□□□□ -1.66
LEMD3-204ENST00000542032 HK3P52790 923 aa4.67□□□□□ -1.66
LEMD3-204ENST00000542032 MRPS35P82673 323 aaKnown RBP4.67□□□□□ -1.66
LEMD3-204ENST00000542032 EXOSC10Q01780 885 aaKnown RBP4.67□□□□□ -1.66
LEMD3-204ENST00000542032 HLXQ14774 488 aaPredicted RBP4.67□□□□□ -1.66
LEMD3-204ENST00000542032 SF3B3Q15393 1217 aaKnown RBP4.67□□□□□ -1.66
LEMD3-204ENST00000542032 CCDC142Q17RM4 750 aa4.67□□□□□ -1.66
LEMD3-204ENST00000542032 CD300EQ496F6 205 aaPredicted RBP4.67□□□□□ -1.66
LEMD3-204ENST00000542032 COLEC12Q5KU26 742 aa4.67□□□□□ -1.66
LEMD3-204ENST00000542032 FBXO42Q6P3S6 717 aa4.67□□□□□ -1.66
LEMD3-204ENST00000542032 USP45Q70EL2 814 aa4.67□□□□□ -1.66
LEMD3-204ENST00000542032 NOL8Q76FK4 1167 aaKnown RBP4.67□□□□□ -1.66
LEMD3-204ENST00000542032 ADGRG5Q8IZF4 528 aa4.67□□□□□ -1.66
LEMD3-204ENST00000542032 C3orf20Q8ND61 904 aa4.67□□□□□ -1.66
LEMD3-204ENST00000542032 CHMP4CQ96CF2 233 aa4.67□□□□□ -1.66
LEMD3-204ENST00000542032 IMPG2Q9BZV3 1241 aa4.67□□□□□ -1.66
LEMD3-204ENST00000542032 SEMA4GQ9NTN9 838 aa4.67□□□□□ -1.66
LEMD3-204ENST00000542032 TLK1Q9UKI8 766 aa4.67□□□□□ -1.66
LEMD3-204ENST00000542032 COL11A2P13942 1736 aaPredicted RBP4.66□□□□□ -1.66
LEMD3-204ENST00000542032 WDR27A2RRH5 827 aa4.66□□□□□ -1.66
LEMD3-204ENST00000542032 MPPED1O15442 326 aa4.66□□□□□ -1.66
LEMD3-204ENST00000542032 CCND1P24385 295 aa4.66□□□□□ -1.66
LEMD3-204ENST00000542032 PTH2RP49190 550 aa4.66□□□□□ -1.66
LEMD3-204ENST00000542032 CACNA2D1P54289 1103 aa4.66□□□□□ -1.66
LEMD3-204ENST00000542032 MC2RQ01718 297 aa4.66□□□□□ -1.66
LEMD3-204ENST00000542032 NHLH1Q02575 133 aa4.66□□□□□ -1.66
LEMD3-204ENST00000542032 FPGSQ05932 587 aa4.66□□□□□ -1.66
LEMD3-204ENST00000542032 PIGFQ07326 219 aa4.66□□□□□ -1.66
LEMD3-204ENST00000542032 NOGQ13253 232 aa4.66□□□□□ -1.66
LEMD3-204ENST00000542032 KIF22Q14807 665 aa4.66□□□□□ -1.66
LEMD3-204ENST00000542032 PTPRRQ15256 657 aa4.66□□□□□ -1.66
LEMD3-204ENST00000542032 SYCE2Q6PIF2 218 aa4.66□□□□□ -1.66
LEMD3-204ENST00000542032 MICALCLQ6ZW33 695 aa4.66□□□□□ -1.66
LEMD3-204ENST00000542032 RD3Q7Z3Z2 195 aa4.66□□□□□ -1.66
LEMD3-204ENST00000542032 SLC17A8Q8NDX2 589 aa4.66□□□□□ -1.66
LEMD3-204ENST00000542032 NSUN7Q8NE18 718 aaKnown RBP4.66□□□□□ -1.66
LEMD3-204ENST00000542032 ACTRT2Q8TDY3 377 aa4.66□□□□□ -1.66
LEMD3-204ENST00000542032 LPIN2Q92539 896 aa4.66□□□□□ -1.66
LEMD3-204ENST00000542032 TMEM125Q96AQ2 219 aa4.66□□□□□ -1.66
LEMD3-204ENST00000542032 LRFN3Q9BTN0 628 aa4.66□□□□□ -1.66
LEMD3-204ENST00000542032 DUSP26Q9BV47 211 aa4.66□□□□□ -1.66
LEMD3-204ENST00000542032 ETAA1Q9NY74 926 aa4.66□□□□□ -1.66
LEMD3-204ENST00000542032 PTGFRNQ9P2B2 879 aa4.66□□□□□ -1.66
LEMD3-204ENST00000542032 LRIT1Q9P2V4 623 aa4.66□□□□□ -1.66
LEMD3-204ENST00000542032 NOP58Q9Y2X3 529 aaKnown RBP4.66□□□□□ -1.66
LEMD3-204ENST00000542032 SPATA31A3Q5VYP0 1347 aa4.66□□□□□ -1.66
LEMD3-204ENST00000542032 YY2O15391 372 aa4.65□□□□□ -1.67
LEMD3-204ENST00000542032 PEX1O43933 1283 aa4.65□□□□□ -1.67
LEMD3-204ENST00000542032 SNUPNO95149 360 aaKnown RBP4.65□□□□□ -1.67
LEMD3-204ENST00000542032 MATN4O95460 622 aa4.65□□□□□ -1.67
LEMD3-204ENST00000542032 CHEK2O96017 543 aa4.65□□□□□ -1.67
LEMD3-204ENST00000542032 GJB1P08034 283 aa4.65□□□□□ -1.67
LEMD3-204ENST00000542032 AKAP5P24588 427 aa4.65□□□□□ -1.67
LEMD3-204ENST00000542032 PIK3CGP48736 1102 aa4.65□□□□□ -1.67
LEMD3-204ENST00000542032 TOB1P50616 345 aaPredicted RBP4.65□□□□□ -1.67
LEMD3-204ENST00000542032 NEK2P51955 445 aa4.65□□□□□ -1.67
LEMD3-204ENST00000542032 ELLP55199 621 aaPredicted RBP4.65□□□□□ -1.67
LEMD3-204ENST00000542032 HABP2Q14520 560 aaPredicted RBP4.65□□□□□ -1.67
LEMD3-204ENST00000542032 NBPF8Q3BBV2 869 aa4.65□□□□□ -1.67
LEMD3-204ENST00000542032 THEMIS2Q5TEJ8 643 aa4.65□□□□□ -1.67
LEMD3-204ENST00000542032 TAPT1Q6NXT6 567 aa4.65□□□□□ -1.67
LEMD3-204ENST00000542032 PPP1R32Q7Z5V6 425 aa4.65□□□□□ -1.67
LEMD3-204ENST00000542032 FAM9AQ8IZU1 332 aaPredicted RBP4.65□□□□□ -1.67
LEMD3-204ENST00000542032 AOPEPQ8N6M6 819 aa4.65□□□□□ -1.67
LEMD3-204ENST00000542032 BOLLQ8N9W6 283 aaKnown RBP4.65□□□□□ -1.67
LEMD3-204ENST00000542032 SLC30A5Q8TAD4 765 aa4.65□□□□□ -1.67
LEMD3-204ENST00000542032 SNX19Q92543 992 aa4.65□□□□□ -1.67
LEMD3-204ENST00000542032 TRIB1Q96RU8 372 aa4.65□□□□□ -1.67
LEMD3-204ENST00000542032 NUP88Q99567 741 aaPredicted RBP4.65□□□□□ -1.67
LEMD3-204ENST00000542032 C1orf43Q9BWL3 253 aa4.65□□□□□ -1.67
LEMD3-204ENST00000542032 WDCPQ9H6R7 721 aa4.65□□□□□ -1.67
LEMD3-204ENST00000542032 BRD9Q9H8M2 597 aa4.65□□□□□ -1.67
LEMD3-204ENST00000542032 TYW1Q9NV66 732 aaKnown RBP4.65□□□□□ -1.67
LEMD3-204ENST00000542032 GNL3LQ9NVN8 582 aaKnown RBP4.65□□□□□ -1.67
LEMD3-204ENST00000542032 SLC52A1Q9NWF4 448 aa4.65□□□□□ -1.67
LEMD3-204ENST00000542032 CFAP97Q9P2B7 532 aa4.65□□□□□ -1.67
LEMD3-204ENST00000542032 KLHL42Q9P2K6 505 aa4.65□□□□□ -1.67
LEMD3-204ENST00000542032 ZDHHC8Q9ULC8 765 aa4.65□□□□□ -1.67
LEMD3-204ENST00000542032 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.65□□□□□ -1.67
LEMD3-204ENST00000542032 ARID4BQ4LE39 1312 aaPredicted RBP4.65□□□□□ -1.67
LEMD3-204ENST00000542032 PROP1O75360 226 aa4.64□□□□□ -1.67
LEMD3-204ENST00000542032 IGLV2-14P01704 120 aa4.64□□□□□ -1.67
LEMD3-204ENST00000542032 GNAI3P08754 354 aa4.64□□□□□ -1.67
LEMD3-204ENST00000542032 PPP3CBP16298 524 aa4.64□□□□□ -1.67
LEMD3-204ENST00000542032 HNRNPMP52272 730 aaKnown RBP eCLIP4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms