RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 CLTAP09496 248 aa16.82■□□□□ 0.28
CLSTN3-213ENST00000541953 MATR3P43243 847 aaKnown RBP eCLIP16.82■□□□□ 0.28
CLSTN3-213ENST00000541953 GRIN1Q05586 938 aa16.82■□□□□ 0.28
CLSTN3-213ENST00000541953 MCTP1Q6DN14 999 aa16.82■□□□□ 0.28
CLSTN3-213ENST00000541953 CENPPQ6IPU0 288 aa16.82■□□□□ 0.28
CLSTN3-213ENST00000541953 HAUS6Q7Z4H7 955 aa16.82■□□□□ 0.28
CLSTN3-213ENST00000541953 DEPDC1BQ8WUY9 529 aa16.82■□□□□ 0.28
CLSTN3-213ENST00000541953 BICD1Q96G01 975 aa16.82■□□□□ 0.28
CLSTN3-213ENST00000541953 FIZ1Q96SL8 496 aa16.82■□□□□ 0.28
CLSTN3-213ENST00000541953 TIPINQ9BVW5 301 aa16.82■□□□□ 0.28
CLSTN3-213ENST00000541953 USP18Q9UMW8 372 aa16.82■□□□□ 0.28
CLSTN3-213ENST00000541953 STK24Q9Y6E0 443 aa16.82■□□□□ 0.28
CLSTN3-213ENST00000541953 DCDC2BA2VCK2 349 aa16.81■□□□□ 0.28
CLSTN3-213ENST00000541953 MAN2B1O00754 1011 aa16.81■□□□□ 0.28
CLSTN3-213ENST00000541953 ZNF263O14978 683 aa16.81■□□□□ 0.28
CLSTN3-213ENST00000541953 MARCKSP29966 332 aaPredicted RBP16.81■□□□□ 0.28
CLSTN3-213ENST00000541953 FCHO2Q0JRZ9 810 aa16.81■□□□□ 0.28
CLSTN3-213ENST00000541953 SPEM2Q0P670 501 aa16.81■□□□□ 0.28
CLSTN3-213ENST00000541953 GPR17Q13304 367 aa16.81■□□□□ 0.28
CLSTN3-213ENST00000541953 C8orf34Q49A92 452 aa16.81■□□□□ 0.28
CLSTN3-213ENST00000541953 JADE1Q6IE81 842 aa16.81■□□□□ 0.28
CLSTN3-213ENST00000541953 CNTNAP3BQ96NU0 1288 aa16.81■□□□□ 0.28
CLSTN3-213ENST00000541953 LPIN3Q9BQK8 851 aa16.81■□□□□ 0.28
CLSTN3-213ENST00000541953 CNTNAP3Q9BZ76 1288 aa16.81■□□□□ 0.28
CLSTN3-213ENST00000541953 PLEKHA5Q9HAU0 1116 aa16.81■□□□□ 0.28
CLSTN3-213ENST00000541953 BLOC1S4Q9NUP1 217 aa16.81■□□□□ 0.28
CLSTN3-213ENST00000541953 GTSE1Q9NYZ3 720 aa16.81■□□□□ 0.28
CLSTN3-213ENST00000541953 DAXXQ9UER7 740 aaPredicted RBP16.81■□□□□ 0.28
CLSTN3-213ENST00000541953 UBQLN1Q9UMX0 589 aaKnown RBP16.81■□□□□ 0.28
CLSTN3-213ENST00000541953 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.81■□□□□ 0.28
CLSTN3-213ENST00000541953 OBSL1O75147 1896 aa16.81■□□□□ 0.28
CLSTN3-213ENST00000541953 TPRP12270 2363 aaKnown RBP16.8■□□□□ 0.28
CLSTN3-213ENST00000541953 CHURC1-FNTBB4DL54 471 aa16.8■□□□□ 0.28
CLSTN3-213ENST00000541953 K7ESF4 209 aa16.8■□□□□ 0.28
CLSTN3-213ENST00000541953 HNRNPDLO14979 420 aaKnown RBP16.8■□□□□ 0.28
CLSTN3-213ENST00000541953 ADRB2P07550 413 aa16.8■□□□□ 0.28
CLSTN3-213ENST00000541953 ATF6P18850 670 aa16.8■□□□□ 0.28
CLSTN3-213ENST00000541953 CYP3A5P20815 502 aa16.8■□□□□ 0.28
CLSTN3-213ENST00000541953 FNTBP49356 437 aa16.8■□□□□ 0.28
CLSTN3-213ENST00000541953 SMTNP53814 917 aa16.8■□□□□ 0.28
CLSTN3-213ENST00000541953 LILRA4P59901 499 aa16.8■□□□□ 0.28
CLSTN3-213ENST00000541953 CYP4F8P98187 520 aa16.8■□□□□ 0.28
CLSTN3-213ENST00000541953 PPP2R3AQ06190 1150 aa16.8■□□□□ 0.28
CLSTN3-213ENST00000541953 TNK2Q07912 1038 aa16.8■□□□□ 0.28
CLSTN3-213ENST00000541953 DHX8Q14562 1220 aaKnown RBP16.8■□□□□ 0.28
CLSTN3-213ENST00000541953 OVOS1Q6IE37 1185 aa16.8■□□□□ 0.28
CLSTN3-213ENST00000541953 DSTYKQ6XUX3 929 aa16.8■□□□□ 0.28
CLSTN3-213ENST00000541953 MAMSTRQ6ZN01 415 aa16.8■□□□□ 0.28
CLSTN3-213ENST00000541953 GPBP1Q86WP2 473 aa16.8■□□□□ 0.28
CLSTN3-213ENST00000541953 ARID3BQ8IVW6 561 aaPredicted RBP16.8■□□□□ 0.28
CLSTN3-213ENST00000541953 SENP8Q96LD8 212 aa16.8■□□□□ 0.28
CLSTN3-213ENST00000541953 SMG9Q9H0W8 520 aaKnown RBP16.8■□□□□ 0.28
CLSTN3-213ENST00000541953 TBX20Q9UMR3 447 aa16.8■□□□□ 0.28
CLSTN3-213ENST00000541953 ACACBO00763 2458 aa16.79■□□□□ 0.28
CLSTN3-213ENST00000541953 TCHHQ07283 1943 aa16.79■□□□□ 0.28
CLSTN3-213ENST00000541953 DENND4CQ5VZ89 1909 aa16.79■□□□□ 0.28
CLSTN3-213ENST00000541953 ANKRD63C9JTQ0 380 aa16.79■□□□□ 0.28
CLSTN3-213ENST00000541953 K7ENM7 598 aa16.79■□□□□ 0.28
CLSTN3-213ENST00000541953 OGTO15294 1046 aa16.79■□□□□ 0.28
CLSTN3-213ENST00000541953 HRO43593 1189 aa16.79■□□□□ 0.28
CLSTN3-213ENST00000541953 PIGRP01833 764 aa16.79■□□□□ 0.28
CLSTN3-213ENST00000541953 CTHP32929 405 aa16.79■□□□□ 0.28
CLSTN3-213ENST00000541953 LIG4P49917 911 aa16.79■□□□□ 0.28
CLSTN3-213ENST00000541953 SPATA1Q5VX52 437 aa16.79■□□□□ 0.28
CLSTN3-213ENST00000541953 C9orf57Q5W0N0 161 aa16.79■□□□□ 0.28
CLSTN3-213ENST00000541953 SCARA3Q6AZY7 606 aa16.79■□□□□ 0.28
CLSTN3-213ENST00000541953 PKN3Q6P5Z2 889 aa16.79■□□□□ 0.28
CLSTN3-213ENST00000541953 DNAJB7Q7Z6W7 309 aaPredicted RBP16.79■□□□□ 0.28
CLSTN3-213ENST00000541953 LEMD2Q8NC56 503 aa16.79■□□□□ 0.28
CLSTN3-213ENST00000541953 STKLD1Q8NE28 680 aa16.79■□□□□ 0.28
CLSTN3-213ENST00000541953 KCNN1Q92952 543 aa16.79■□□□□ 0.28
CLSTN3-213ENST00000541953 FAM212AQ96EL1 285 aa16.79■□□□□ 0.28
CLSTN3-213ENST00000541953 CHFRQ96EP1 664 aa16.79■□□□□ 0.28
CLSTN3-213ENST00000541953 FAM84AQ96KN4 292 aa16.79■□□□□ 0.28
CLSTN3-213ENST00000541953 FAM126AQ9BYI3 521 aaPredicted RBP16.79■□□□□ 0.28
CLSTN3-213ENST00000541953 IL21Q9HBE4 155 aa16.79■□□□□ 0.28
CLSTN3-213ENST00000541953 CPSF3Q9UKF6 684 aaKnown RBP16.79■□□□□ 0.28
CLSTN3-213ENST00000541953 MAFFQ9ULX9 164 aa16.79■□□□□ 0.28
CLSTN3-213ENST00000541953 CACNA1BQ00975 2339 aa16.79■□□□□ 0.28
CLSTN3-213ENST00000541953 CHD8Q9HCK8 2581 aa16.79■□□□□ 0.28
CLSTN3-213ENST00000541953 A0A0B4J269 797 aa16.78■□□□□ 0.28
CLSTN3-213ENST00000541953 OR6C75A6NL08 312 aa16.78■□□□□ 0.28
CLSTN3-213ENST00000541953 SPECC1L-ADORA2AF8WAN1 911 aa16.78■□□□□ 0.28
CLSTN3-213ENST00000541953 CHADO15335 359 aa16.78■□□□□ 0.28
CLSTN3-213ENST00000541953 TYMPP19971 482 aa16.78■□□□□ 0.28
CLSTN3-213ENST00000541953 GABRR2P28476 465 aa16.78■□□□□ 0.28
CLSTN3-213ENST00000541953 NMT1P30419 496 aaKnown RBP16.78■□□□□ 0.28
CLSTN3-213ENST00000541953 CCR3P51677 355 aa16.78■□□□□ 0.28
CLSTN3-213ENST00000541953 ZNF131P52739 623 aa16.78■□□□□ 0.28
CLSTN3-213ENST00000541953 EPHB3P54753 998 aa16.78■□□□□ 0.28
CLSTN3-213ENST00000541953 WNT7BP56706 349 aa16.78■□□□□ 0.28
CLSTN3-213ENST00000541953 MCM6Q14566 821 aa16.78■□□□□ 0.28
CLSTN3-213ENST00000541953 PON2Q15165 354 aa16.78■□□□□ 0.28
CLSTN3-213ENST00000541953 RILPL1Q5EBL4 403 aa16.78■□□□□ 0.28
CLSTN3-213ENST00000541953 GPR158Q5T848 1215 aa16.78■□□□□ 0.28
CLSTN3-213ENST00000541953 HEATR6Q6AI08 1181 aaKnown RBP16.78■□□□□ 0.28
CLSTN3-213ENST00000541953 PRR23BQ6ZRT6 265 aa16.78■□□□□ 0.28
CLSTN3-213ENST00000541953 USP37Q86T82 979 aa16.78■□□□□ 0.28
CLSTN3-213ENST00000541953 RIN3Q8TB24 985 aa16.78■□□□□ 0.28
CLSTN3-213ENST00000541953 PSMG2Q969U7 264 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms