RNA–Protein interactions for RNA: ENST00000541735.5

DMD-228, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 7,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-228ENST00000541735 PP2D1A8MPX8 630 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 PGRMC1O00264 195 aaKnown RBP6.61□□□□□ -1.35
DMD-228ENST00000541735 TEX28O15482 410 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 TPD52L2O43399 206 aaKnown RBP6.61□□□□□ -1.35
DMD-228ENST00000541735 ACO1P21399 889 aaKnown RBP6.61□□□□□ -1.35
DMD-228ENST00000541735 FLT3P36888 993 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 ATP12AP54707 1039 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 NCKAP1LP55160 1127 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 NBPF9Q3BBW0 867 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 SV2CQ496J9 727 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 BRSK2Q8IWQ3 736 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 TTLL11Q8NHH1 800 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 INTS4Q96HW7 963 aaKnown RBP6.61□□□□□ -1.35
DMD-228ENST00000541735 FAM81BQ96LP2 452 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 CCT7Q99832 543 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 HTATIP2Q9BUP3 242 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 C20orf96Q9NUD7 363 aaPredicted RBP6.61□□□□□ -1.35
DMD-228ENST00000541735 ANAPC2Q9UJX6 822 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 ABCC12Q96J65 1359 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 EMSYQ7Z589 1322 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 RRN3P2A6NIE6 340 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 CHL1O00533 1208 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 GPR182O15218 404 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 TDP2O95551 362 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 CALB1P05937 261 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 ZNF24P17028 368 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 EIF3EP60228 445 aaKnown RBP6.61□□□□□ -1.35
DMD-228ENST00000541735 FSCBQ5H9T9 825 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 ATG4CQ96DT6 458 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 SGF29Q96ES7 293 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 ERO1AQ96HE7 468 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.61□□□□□ -1.35
DMD-228ENST00000541735 STK33Q9BYT3 514 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 UTYO14607 1347 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 IFRD1O00458 451 aaPredicted RBP6.6□□□□□ -1.35
DMD-228ENST00000541735 SEPT4O43236 478 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 DSG3P32926 999 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 MCAMP43121 646 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 BEX3Q00994 111 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 ZNF658Q5TYW1 1059 aaPredicted RBP6.6□□□□□ -1.35
DMD-228ENST00000541735 ATF7IP2Q5U623 682 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 FAM171A1Q5VUB5 890 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 ARHGAP17Q68EM7 881 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 ZNF564Q8TBZ8 553 aaPredicted RBP6.6□□□□□ -1.35
DMD-228ENST00000541735 GRIN3AQ8TCU5 1115 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 PI4K2AQ9BTU6 479 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 MAN1B1Q9UKM7 699 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 CAB39Q9Y376 341 aaPredicted RBP6.6□□□□□ -1.35
DMD-228ENST00000541735 MYPNQ86TC9 1320 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 CYP26A1O43174 497 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 WASP42768 502 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 ACTR2P61160 394 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 CSNK2BP67870 215 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 RBP5P82980 135 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 USP10Q14694 798 aaKnown RBP6.6□□□□□ -1.35
DMD-228ENST00000541735 PTGISQ16647 500 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 GALNTL6Q49A17 601 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 PRAMEF19Q5SWL8 479 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 PLPP4Q5VZY2 271 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 HORMAD1Q86X24 394 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 BCAS4Q8TDM0 211 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 RIN2Q8WYP3 895 aaPredicted RBP6.6□□□□□ -1.35
DMD-228ENST00000541735 SERAC1Q96JX3 654 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 CORO1BQ9BR76 489 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 PIF1Q9H611 641 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 SLC28A3Q9HAS3 691 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 CYP26B1Q9NR63 512 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 THOC2Q8NI27 1593 aaKnown RBP6.6□□□□□ -1.35
DMD-228ENST00000541735 PEX1O43933 1283 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 CTNND1O60716 968 aaKnown RBP6.6□□□□□ -1.35
DMD-228ENST00000541735 KRT37O76014 449 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 WDR47O94967 919 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 ITGB3P05106 788 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 CYP2C8P10632 490 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 CCT5P48643 541 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 PRIM2P49643 509 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 GFPT1Q06210 699 aaPredicted RBP6.6□□□□□ -1.35
DMD-228ENST00000541735 DET1Q7L5Y6 550 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 CCDC60Q8IWA6 550 aaPredicted RBP6.6□□□□□ -1.35
DMD-228ENST00000541735 OR10G6Q8NH81 332 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 ZMAT2Q96NC0 199 aaKnown RBP6.6□□□□□ -1.35
DMD-228ENST00000541735 SLC38A7Q9NVC3 462 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 EHD2Q9NZN4 543 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 MROH7-TTC4A0A0A0MT08 1334 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 TRBV23OR9-2A0A075B6M9 112 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 HNRNPCP07910 306 aaKnown RBP eCLIP6.6□□□□□ -1.35
DMD-228ENST00000541735 SFNP31947 248 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 ARHGAP25P42331 645 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 TFDP2Q14188 446 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 DDI2Q5TDH0 399 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 IQSEC1Q6DN90 963 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 NOTUMQ6P988 496 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 C16orf87Q6PH81 154 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 BTNL9Q6UXG8 535 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 ELL3Q9HB65 397 aaPredicted RBP6.6□□□□□ -1.35
DMD-228ENST00000541735 XPNPEP3Q9NQH7 507 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 EVA1BQ9NVM1 165 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 EDC4Q6P2E9 1401 aaKnown RBP6.6□□□□□ -1.35
DMD-228ENST00000541735 RASA4BC9J798 803 aa6.6□□□□□ -1.35
DMD-228ENST00000541735 LAD1O00515 517 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms