RNA–Protein interactions for RNA: ENST00000541488.1

PRKDC-210, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-210ENST00000541488 DSC2Q02487 901 aa5.14□□□□□ -1.59
PRKDC-210ENST00000541488 CCDC93Q567U6 631 aa5.14□□□□□ -1.59
PRKDC-210ENST00000541488 KAZNQ674X7 775 aa5.14□□□□□ -1.59
PRKDC-210ENST00000541488 TAPT1Q6NXT6 567 aa5.14□□□□□ -1.59
PRKDC-210ENST00000541488 SYCE2Q6PIF2 218 aa5.14□□□□□ -1.59
PRKDC-210ENST00000541488 SLC4A10Q6U841 1118 aa5.14□□□□□ -1.59
PRKDC-210ENST00000541488 PEG10Q86TG7 708 aaKnown RBP5.14□□□□□ -1.59
PRKDC-210ENST00000541488 ADGRG5Q8IZF4 528 aa5.14□□□□□ -1.59
PRKDC-210ENST00000541488 SH2D3CQ8N5H7 860 aa5.14□□□□□ -1.59
PRKDC-210ENST00000541488 FAM98AQ8NCA5 519 aaKnown RBP5.14□□□□□ -1.59
PRKDC-210ENST00000541488 SNX19Q92543 992 aa5.14□□□□□ -1.59
PRKDC-210ENST00000541488 TRIB1Q96RU8 372 aa5.14□□□□□ -1.59
PRKDC-210ENST00000541488 VKORC1Q9BQB6 163 aa5.14□□□□□ -1.59
PRKDC-210ENST00000541488 ASPSCR1Q9BZE9 553 aa5.14□□□□□ -1.59
PRKDC-210ENST00000541488 INTS13Q9NVM9 706 aa5.14□□□□□ -1.59
PRKDC-210ENST00000541488 ST3GAL5Q9UNP4 418 aa5.14□□□□□ -1.59
PRKDC-210ENST00000541488 COL4A3BPQ9Y5P4 624 aa5.14□□□□□ -1.59
PRKDC-210ENST00000541488 COX11Q9Y6N1 276 aa5.14□□□□□ -1.59
PRKDC-210ENST00000541488 COL11A2P13942 1736 aaPredicted RBP5.14□□□□□ -1.59
PRKDC-210ENST00000541488 A0A1W2PS29 197 aa5.13□□□□□ -1.59
PRKDC-210ENST00000541488 LRRC3CA6NJW4 275 aa5.13□□□□□ -1.59
PRKDC-210ENST00000541488 ALG1L2C9J202 215 aa5.13□□□□□ -1.59
PRKDC-210ENST00000541488 ZRANB2O95218 330 aaKnown RBP eCLIP5.13□□□□□ -1.59
PRKDC-210ENST00000541488 SMARCA1P28370 1054 aa5.13□□□□□ -1.59
PRKDC-210ENST00000541488 CD38P28907 300 aa5.13□□□□□ -1.59
PRKDC-210ENST00000541488 FOLR3P41439 243 aa5.13□□□□□ -1.59
PRKDC-210ENST00000541488 FXR1P51114 621 aaKnown RBP eCLIP5.13□□□□□ -1.593e-8■■■■□ 26.1
PRKDC-210ENST00000541488 HNRNPMP52272 730 aaKnown RBP eCLIP5.13□□□□□ -1.59
PRKDC-210ENST00000541488 MAPK10P53779 464 aa5.13□□□□□ -1.59
PRKDC-210ENST00000541488 DYRK1AQ13627 763 aa5.13□□□□□ -1.59
PRKDC-210ENST00000541488 TTC7BQ86TV6 843 aa5.13□□□□□ -1.59
PRKDC-210ENST00000541488 AOPEPQ8N6M6 819 aa5.13□□□□□ -1.59
PRKDC-210ENST00000541488 MYCBPAPQ8TBZ2 947 aa5.13□□□□□ -1.59
PRKDC-210ENST00000541488 NSUN6Q8TEA1 469 aaKnown RBP5.13□□□□□ -1.59
PRKDC-210ENST00000541488 PDLIM2Q96JY6 352 aa5.13□□□□□ -1.59
PRKDC-210ENST00000541488 SMOQ99835 787 aa5.13□□□□□ -1.59
PRKDC-210ENST00000541488 HEPHQ9BQS7 1158 aa5.13□□□□□ -1.59
PRKDC-210ENST00000541488 CALCOCO1Q9P1Z2 691 aa5.13□□□□□ -1.59
PRKDC-210ENST00000541488 NR2E3Q9Y5X4 410 aa5.13□□□□□ -1.59
PRKDC-210ENST00000541488 PROB1E7EW31 1015 aa5.12□□□□□ -1.59
PRKDC-210ENST00000541488 POLRMTO00411 1230 aaKnown RBP5.12□□□□□ -1.59
PRKDC-210ENST00000541488 RPLP2P05387 115 aaKnown RBP5.12□□□□□ -1.59
PRKDC-210ENST00000541488 GNAI3P08754 354 aa5.12□□□□□ -1.59
PRKDC-210ENST00000541488 ANXA11P50995 505 aaKnown RBP5.12□□□□□ -1.59
PRKDC-210ENST00000541488 ZNF135P52742 658 aaPredicted RBP5.12□□□□□ -1.59
PRKDC-210ENST00000541488 CACNA2D1P54289 1103 aa5.12□□□□□ -1.59
PRKDC-210ENST00000541488 ADKP55263 362 aaKnown RBP5.12□□□□□ -1.59
PRKDC-210ENST00000541488 GNAI1P63096 354 aa5.12□□□□□ -1.59
PRKDC-210ENST00000541488 PIGFQ07326 219 aa5.12□□□□□ -1.59
PRKDC-210ENST00000541488 TSTD2Q5T7W7 516 aa5.12□□□□□ -1.59
PRKDC-210ENST00000541488 VWA1Q6PCB0 445 aa5.12□□□□□ -1.59
PRKDC-210ENST00000541488 CATIPQ7Z7H3 387 aa5.12□□□□□ -1.59
PRKDC-210ENST00000541488 B3GALNT2Q8NCR0 500 aa5.12□□□□□ -1.59
PRKDC-210ENST00000541488 TNPO1Q92973 898 aaKnown RBP5.12□□□□□ -1.59
PRKDC-210ENST00000541488 SMOC2Q9H3U7 446 aa5.12□□□□□ -1.59
PRKDC-210ENST00000541488 BRD9Q9H8M2 597 aa5.12□□□□□ -1.59
PRKDC-210ENST00000541488 CPNE5Q9HCH3 593 aa5.12□□□□□ -1.59
PRKDC-210ENST00000541488 PCDH12Q9NPG4 1184 aa5.12□□□□□ -1.59
PRKDC-210ENST00000541488 MAN1C1Q9NR34 630 aa5.12□□□□□ -1.59
PRKDC-210ENST00000541488 AGAP1Q9UPQ3 857 aa5.12□□□□□ -1.59
PRKDC-210ENST00000541488 CFAP20Q9Y6A4 193 aaKnown RBP5.12□□□□□ -1.59
PRKDC-210ENST00000541488 ADM5C9JUS6 153 aa5.11□□□□□ -1.59
PRKDC-210ENST00000541488 F5H697 171 aa5.11□□□□□ -1.59
PRKDC-210ENST00000541488 SNUPNO95149 360 aaKnown RBP5.11□□□□□ -1.59
PRKDC-210ENST00000541488 GJB1P08034 283 aa5.11□□□□□ -1.59
PRKDC-210ENST00000541488 RHOP08100 348 aa5.11□□□□□ -1.59
PRKDC-210ENST00000541488 ELFN1P0C7U0 828 aa5.11□□□□□ -1.59
PRKDC-210ENST00000541488 NPTX2P47972 431 aa5.11□□□□□ -1.59
PRKDC-210ENST00000541488 ELLP55199 621 aaPredicted RBP5.11□□□□□ -1.59
PRKDC-210ENST00000541488 LCE1AQ5T7P2 110 aa5.11□□□□□ -1.59
PRKDC-210ENST00000541488 SEMA4GQ9NTN9 838 aa5.11□□□□□ -1.59
PRKDC-210ENST00000541488 ABCF2Q9UG63 623 aa5.11□□□□□ -1.59
PRKDC-210ENST00000541488 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.11□□□□□ -1.59
PRKDC-210ENST00000541488 VWC2LB2RUY7 222 aa5.1□□□□□ -1.59
PRKDC-210ENST00000541488 NT5C1B-RDH14C9J2C7 533 aa5.1□□□□□ -1.59
PRKDC-210ENST00000541488 C1QL1O75973 258 aa5.1□□□□□ -1.59
PRKDC-210ENST00000541488 KIF20AO95235 890 aa5.1□□□□□ -1.59
PRKDC-210ENST00000541488 IL33O95760 270 aa5.1□□□□□ -1.59
PRKDC-210ENST00000541488 C1RP00736 705 aa5.1□□□□□ -1.59
PRKDC-210ENST00000541488 SRGNP10124 158 aa5.1□□□□□ -1.59
PRKDC-210ENST00000541488 CDK4P11802 303 aa5.1□□□□□ -1.59
PRKDC-210ENST00000541488 PDCP20941 246 aa5.1□□□□□ -1.59
PRKDC-210ENST00000541488 AMIGO2Q86SJ2 522 aa5.1□□□□□ -1.59
PRKDC-210ENST00000541488 PCSK9Q8NBP7 692 aaKnown RBP5.1□□□□□ -1.59
PRKDC-210ENST00000541488 C3orf20Q8ND61 904 aa5.1□□□□□ -1.59
PRKDC-210ENST00000541488 TPSD1Q9BZJ3 242 aa5.1□□□□□ -1.59
PRKDC-210ENST00000541488 HOMER2Q9NSB8 354 aa5.1□□□□□ -1.59
PRKDC-210ENST00000541488 SLC17A6Q9P2U8 582 aa5.1□□□□□ -1.59
PRKDC-210ENST00000541488 LUC7L2Q9Y383 392 aaKnown RBP5.1□□□□□ -1.59
PRKDC-210ENST00000541488 LINC00473A8K010 186 aa5.09□□□□□ -1.59
PRKDC-210ENST00000541488 AHSGP02765 367 aa5.09□□□□□ -1.59
PRKDC-210ENST00000541488 FTLP02792 175 aaPredicted RBP5.09□□□□□ -1.59
PRKDC-210ENST00000541488 LPOP22079 712 aaPredicted RBP5.09□□□□□ -1.59
PRKDC-210ENST00000541488 KRT85P78386 507 aa5.09□□□□□ -1.59
PRKDC-210ENST00000541488 EXOSC10Q01780 885 aaKnown RBP5.09□□□□□ -1.59
PRKDC-210ENST00000541488 TXNRD1Q16881 649 aa5.09□□□□□ -1.59
PRKDC-210ENST00000541488 CCDC157Q569K6 752 aa5.09□□□□□ -1.59
PRKDC-210ENST00000541488 BRDTQ58F21 947 aaPredicted RBP5.09□□□□□ -1.59
PRKDC-210ENST00000541488 TAF2Q6P1X5 1199 aa5.09□□□□□ -1.59
PRKDC-210ENST00000541488 MICALCLQ6ZW33 695 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms