RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 FUT11Q495W5 492 aa16.03■□□□□ 0.16
HMGA2-210ENST00000541363 RESP18Q5W5W9 173 aa16.03■□□□□ 0.16
HMGA2-210ENST00000541363 ESRP1Q6NXG1 681 aaKnown RBP16.03■□□□□ 0.16
HMGA2-210ENST00000541363 IZUMO1Q8IYV9 350 aa16.03■□□□□ 0.16
HMGA2-210ENST00000541363 DLGAP2Q9P1A6 1054 aa16.03■□□□□ 0.16
HMGA2-210ENST00000541363 USP21Q9UK80 565 aa16.03■□□□□ 0.16
HMGA2-210ENST00000541363 MAGEA13PA6NCF6 341 aa16.03■□□□□ 0.16
HMGA2-210ENST00000541363 CDC25AP30304 524 aa16.03■□□□□ 0.16
HMGA2-210ENST00000541363 SPRP35270 261 aaPredicted RBP16.03■□□□□ 0.16
HMGA2-210ENST00000541363 MDH1P40925 334 aaKnown RBP16.03■□□□□ 0.16
HMGA2-210ENST00000541363 HNMTP50135 292 aa16.03■□□□□ 0.16
HMGA2-210ENST00000541363 TTLL4Q14679 1199 aa16.03■□□□□ 0.16
HMGA2-210ENST00000541363 EPHX4Q8IUS5 362 aa16.03■□□□□ 0.16
HMGA2-210ENST00000541363 PACSIN1Q9BY11 444 aa16.03■□□□□ 0.16
HMGA2-210ENST00000541363 CXorf56Q9H5V9 222 aa16.03■□□□□ 0.16
HMGA2-210ENST00000541363 ATP6V1HQ9UI12 483 aa16.03■□□□□ 0.16
HMGA2-210ENST00000541363 A0A1W2PP64 1363 aa16.03■□□□□ 0.16
HMGA2-210ENST00000541363 ARHGEF10O15013 1369 aa16.03■□□□□ 0.16
HMGA2-210ENST00000541363 HSMCR30P0CW71 290 aa16.02■□□□□ 0.16
HMGA2-210ENST00000541363 KBTBD12Q3ZCT8 623 aa16.02■□□□□ 0.16
HMGA2-210ENST00000541363 PLEKHA7Q6IQ23 1121 aa16.02■□□□□ 0.16
HMGA2-210ENST00000541363 FAM47DPA6NHR8 397 aa16.02■□□□□ 0.16
HMGA2-210ENST00000541363 TRAPPC3O43617 180 aa16.02■□□□□ 0.16
HMGA2-210ENST00000541363 RTN2O75298 545 aa16.02■□□□□ 0.16
HMGA2-210ENST00000541363 DUOXA2Q1HG44 320 aa16.02■□□□□ 0.16
HMGA2-210ENST00000541363 PMF1Q6P1K2 205 aa16.02■□□□□ 0.16
HMGA2-210ENST00000541363 NSUN7Q8NE18 718 aaKnown RBP16.02■□□□□ 0.16
HMGA2-210ENST00000541363 TRIM43BA6NCK2 446 aa16.02■□□□□ 0.16
HMGA2-210ENST00000541363 CIAO1O76071 339 aa16.02■□□□□ 0.16
HMGA2-210ENST00000541363 SARSP49591 514 aaKnown RBP16.02■□□□□ 0.16
HMGA2-210ENST00000541363 DGKKQ5KSL6 1271 aa16.02■□□□□ 0.16
HMGA2-210ENST00000541363 TAF8Q7Z7C8 310 aa16.02■□□□□ 0.16
HMGA2-210ENST00000541363 MMGT1Q8N4V1 131 aa16.02■□□□□ 0.16
HMGA2-210ENST00000541363 DDX47Q9H0S4 455 aaKnown RBP16.02■□□□□ 0.16
HMGA2-210ENST00000541363 ARMC7Q9H6L4 198 aa16.02■□□□□ 0.16
HMGA2-210ENST00000541363 HEATR9A2RTY3 570 aa16.02■□□□□ 0.16
HMGA2-210ENST00000541363 NSL1Q96IY1 281 aa16.02■□□□□ 0.16
HMGA2-210ENST00000541363 GPR63Q9BZJ6 419 aa16.02■□□□□ 0.16
HMGA2-210ENST00000541363 SLITRK2Q9H156 845 aa16.02■□□□□ 0.16
HMGA2-210ENST00000541363 COPS7BQ9H9Q2 264 aaPredicted RBP16.02■□□□□ 0.16
HMGA2-210ENST00000541363 VAV3Q9UKW4 847 aa16.02■□□□□ 0.16
HMGA2-210ENST00000541363 MYO3BQ8WXR4 1341 aa16.02■□□□□ 0.15
HMGA2-210ENST00000541363 STAT3P40763 770 aa16.02■□□□□ 0.15
HMGA2-210ENST00000541363 PCSK7Q16549 785 aa16.02■□□□□ 0.15
HMGA2-210ENST00000541363 ZSWIM7Q19AV6 140 aa16.02■□□□□ 0.15
HMGA2-210ENST00000541363 KNOP1Q1ED39 458 aaKnown RBP16.02■□□□□ 0.15
HMGA2-210ENST00000541363 MED15Q96RN5 788 aa16.02■□□□□ 0.15
HMGA2-210ENST00000541363 PNMA8BQ9ULN7 279 aaPredicted RBP16.02■□□□□ 0.15
HMGA2-210ENST00000541363 WARSP23381 471 aaKnown RBP16.02■□□□□ 0.15
HMGA2-210ENST00000541363 BYSLQ13895 437 aaKnown RBP16.02■□□□□ 0.15
HMGA2-210ENST00000541363 ZMYM1Q5SVZ6 1142 aa16.02■□□□□ 0.15
HMGA2-210ENST00000541363 PADI6Q6TGC4 694 aa16.02■□□□□ 0.15
HMGA2-210ENST00000541363 ZNF304Q9HCX3 659 aa16.02■□□□□ 0.15
HMGA2-210ENST00000541363 IPPQ9Y573 584 aa16.02■□□□□ 0.15
HMGA2-210ENST00000541363 PSMD12O00232 456 aaPredicted RBP16.02■□□□□ 0.15
HMGA2-210ENST00000541363 RFX3P48380 749 aa16.02■□□□□ 0.15
HMGA2-210ENST00000541363 TAB1Q15750 504 aa16.02■□□□□ 0.15
HMGA2-210ENST00000541363 TYW3Q6IPR3 259 aaKnown RBP16.02■□□□□ 0.15
HMGA2-210ENST00000541363 TRPM8Q7Z2W7 1104 aa16.02■□□□□ 0.15
HMGA2-210ENST00000541363 HIC2Q96JB3 615 aa16.02■□□□□ 0.15
HMGA2-210ENST00000541363 PCDHA6Q9UN73 950 aa16.02■□□□□ 0.15
HMGA2-210ENST00000541363 PCDHA8Q9Y5H6 950 aa16.02■□□□□ 0.15
HMGA2-210ENST00000541363 CYP2C19P33261 490 aa16.01■□□□□ 0.15
HMGA2-210ENST00000541363 LRRC71Q8N4P6 559 aa16.01■□□□□ 0.15
HMGA2-210ENST00000541363 INTS2Q9H0H0 1204 aaKnown RBP16.01■□□□□ 0.15
HMGA2-210ENST00000541363 TBC1D22BQ9NU19 505 aa16.01■□□□□ 0.15
HMGA2-210ENST00000541363 RBAKQ9NYW8 714 aaPredicted RBP16.01■□□□□ 0.15
HMGA2-210ENST00000541363 SH2B2O14492 632 aaPredicted RBP16.01■□□□□ 0.15
HMGA2-210ENST00000541363 SLC16A4O15374 487 aa16.01■□□□□ 0.15
HMGA2-210ENST00000541363 POLBP06746 335 aa16.01■□□□□ 0.15
HMGA2-210ENST00000541363 ACADSP16219 412 aa16.01■□□□□ 0.15
HMGA2-210ENST00000541363 SSTR3P32745 418 aaPredicted RBP16.01■□□□□ 0.15
HMGA2-210ENST00000541363 FNTAP49354 379 aa16.01■□□□□ 0.15
HMGA2-210ENST00000541363 FRMD6Q96NE9 622 aa16.01■□□□□ 0.15
HMGA2-210ENST00000541363 CATSPERBQ9H7T0 1116 aa16.01■□□□□ 0.15
HMGA2-210ENST00000541363 PCDHB6Q9Y5E3 794 aa16.01■□□□□ 0.15
HMGA2-210ENST00000541363 TRAPPC8Q9Y2L5 1435 aa16.01■□□□□ 0.15
HMGA2-210ENST00000541363 ZNF862O60290 1169 aa16.01■□□□□ 0.15
HMGA2-210ENST00000541363 ZNF24P17028 368 aa16.01■□□□□ 0.15
HMGA2-210ENST00000541363 GPC1P35052 558 aa16.01■□□□□ 0.15
HMGA2-210ENST00000541363 ZRANB3Q5FWF4 1079 aa16.01■□□□□ 0.15
HMGA2-210ENST00000541363 RMND5BQ96G75 393 aaPredicted RBP16.01■□□□□ 0.15
HMGA2-210ENST00000541363 POLG2Q9UHN1 485 aa16.01■□□□□ 0.15
HMGA2-210ENST00000541363 SF3B1O75533 1304 aaKnown RBP eCLIP16.01■□□□□ 0.15
HMGA2-210ENST00000541363 RNF123Q5XPI4 1314 aa16.01■□□□□ 0.15
HMGA2-210ENST00000541363 E7ENQ6 273 aa16.01■□□□□ 0.15
HMGA2-210ENST00000541363 PCCAP05165 728 aaPredicted RBP16.01■□□□□ 0.15
HMGA2-210ENST00000541363 ZNF57Q68EA5 555 aaPredicted RBP16.01■□□□□ 0.15
HMGA2-210ENST00000541363 CACTIN-AS1Q8N1I8 211 aa16.01■□□□□ 0.15
HMGA2-210ENST00000541363 SEPT1Q8WYJ6 367 aa16.01■□□□□ 0.15
HMGA2-210ENST00000541363 NDUFA13Q9P0J0 144 aa16.01■□□□□ 0.15
HMGA2-210ENST00000541363 SH3BP1Q9Y3L3 701 aa16.01■□□□□ 0.15
HMGA2-210ENST00000541363 EDC4Q6P2E9 1401 aaKnown RBP16.01■□□□□ 0.15
HMGA2-210ENST00000541363 PTK7Q13308 1070 aa16.01■□□□□ 0.15
HMGA2-210ENST00000541363 CYP4A22Q5TCH4 519 aa16.01■□□□□ 0.15
HMGA2-210ENST00000541363 ZCCHC8Q6NZY4 707 aaKnown RBP16.01■□□□□ 0.15
HMGA2-210ENST00000541363 VPS9D1Q9Y2B5 631 aa16.01■□□□□ 0.15
HMGA2-210ENST00000541363 PDE8BO95263 885 aa16.01■□□□□ 0.15
HMGA2-210ENST00000541363 ZCWPW2Q504Y3 356 aa16.01■□□□□ 0.15
HMGA2-210ENST00000541363 SYCP2LQ5T4T6 812 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms