RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 STXBP5LQ9Y2K9 1186 aa15.22■□□□□ 0.03
SFSWAP-210ENST00000541286 CCDC169A6NNP5 214 aa15.21■□□□□ 0.03
SFSWAP-210ENST00000541286 SMIM24O75264 130 aa15.21■□□□□ 0.03
SFSWAP-210ENST00000541286 ACSL3O95573 720 aa15.21■□□□□ 0.03
SFSWAP-210ENST00000541286 LGALS2P05162 132 aa15.21■□□□□ 0.03
SFSWAP-210ENST00000541286 COMTP21964 271 aa15.21■□□□□ 0.03
SFSWAP-210ENST00000541286 ABL2P42684 1182 aa15.21■□□□□ 0.03
SFSWAP-210ENST00000541286 ERFP50548 548 aa15.21■□□□□ 0.03
SFSWAP-210ENST00000541286 ANKRD42Q8N9B4 389 aa15.21■□□□□ 0.03
SFSWAP-210ENST00000541286 GDAP1Q8TB36 358 aa15.21■□□□□ 0.03
SFSWAP-210ENST00000541286 NEK9Q8TD19 979 aa15.21■□□□□ 0.03
SFSWAP-210ENST00000541286 SEPT1Q8WYJ6 367 aa15.21■□□□□ 0.03
SFSWAP-210ENST00000541286 KLHL29Q96CT2 875 aa15.21■□□□□ 0.03
SFSWAP-210ENST00000541286 NACC1Q96RE7 527 aa15.21■□□□□ 0.03
SFSWAP-210ENST00000541286 DDX3YO15523 660 aaKnown RBP15.21■□□□□ 0.03
SFSWAP-210ENST00000541286 SGPL1O95470 568 aa15.21■□□□□ 0.03
SFSWAP-210ENST00000541286 HOXC6P09630 235 aa15.21■□□□□ 0.03
SFSWAP-210ENST00000541286 TUBP50607 506 aa15.21■□□□□ 0.03
SFSWAP-210ENST00000541286 CLCN3P51790 818 aa15.21■□□□□ 0.03
SFSWAP-210ENST00000541286 PPP3CAQ08209 521 aa15.21■□□□□ 0.03
SFSWAP-210ENST00000541286 TAF11Q15544 211 aa15.21■□□□□ 0.03
SFSWAP-210ENST00000541286 DUSP28Q4G0W2 176 aa15.21■□□□□ 0.03
SFSWAP-210ENST00000541286 TRPM8Q7Z2W7 1104 aa15.21■□□□□ 0.03
SFSWAP-210ENST00000541286 ZC3H3Q8IXZ2 948 aaKnown RBP15.21■□□□□ 0.03
SFSWAP-210ENST00000541286 UBL4BQ8N7F7 174 aa15.21■□□□□ 0.03
SFSWAP-210ENST00000541286 MORC4Q8TE76 937 aa15.21■□□□□ 0.03
SFSWAP-210ENST00000541286 C1orf54Q8WWF1 131 aa15.21■□□□□ 0.03
SFSWAP-210ENST00000541286 POLR3CQ9BUI4 534 aaPredicted RBP15.21■□□□□ 0.03
SFSWAP-210ENST00000541286 OLFML3Q9NRN5 406 aa15.21■□□□□ 0.03
SFSWAP-210ENST00000541286 RASAL2Q9UJF2 1139 aa15.21■□□□□ 0.03
SFSWAP-210ENST00000541286 BTNL10A8MVZ5 291 aa15.21■□□□□ 0.02
SFSWAP-210ENST00000541286 PSAPP07602 524 aa15.21■□□□□ 0.02
SFSWAP-210ENST00000541286 CREB1P16220 341 aa15.21■□□□□ 0.02
SFSWAP-210ENST00000541286 PSMC5P62195 406 aa15.21■□□□□ 0.02
SFSWAP-210ENST00000541286 SEL1L2Q5TEA6 688 aa15.21■□□□□ 0.02
SFSWAP-210ENST00000541286 CCDC137Q6PK04 289 aaKnown RBP15.21■□□□□ 0.02
SFSWAP-210ENST00000541286 LONP2Q86WA8 852 aa15.21■□□□□ 0.02
SFSWAP-210ENST00000541286 SH3GL3Q99963 347 aa15.21■□□□□ 0.02
SFSWAP-210ENST00000541286 INTS9Q9NV88 658 aaKnown RBP15.21■□□□□ 0.02
SFSWAP-210ENST00000541286 NOP53Q9NZM5 478 aaKnown RBP15.21■□□□□ 0.02
SFSWAP-210ENST00000541286 GNEQ9Y223 722 aaKnown RBP15.21■□□□□ 0.02
SFSWAP-210ENST00000541286 ANKRD62A6NC57 917 aa15.2■□□□□ 0.02
SFSWAP-210ENST00000541286 SLC16A4O15374 487 aa15.2■□□□□ 0.02
SFSWAP-210ENST00000541286 SESN3P58005 492 aa15.2■□□□□ 0.02
SFSWAP-210ENST00000541286 C11orf91Q3C1V1 193 aa15.2■□□□□ 0.02
SFSWAP-210ENST00000541286 SLFN11Q7Z7L1 901 aa15.2■□□□□ 0.02
SFSWAP-210ENST00000541286 SOCS4Q8WXH5 440 aa15.2■□□□□ 0.02
SFSWAP-210ENST00000541286 OSBPL1AQ9BXW6 950 aa15.2■□□□□ 0.02
SFSWAP-210ENST00000541286 KDM4CQ9H3R0 1056 aa15.2■□□□□ 0.02
SFSWAP-210ENST00000541286 FGFR1OP2Q9NVK5 253 aa15.2■□□□□ 0.02
SFSWAP-210ENST00000541286 TTLL13PA6NNM8 815 aa15.2■□□□□ 0.02
SFSWAP-210ENST00000541286 DLATP10515 647 aaKnown RBP15.2■□□□□ 0.02
SFSWAP-210ENST00000541286 CYBAP13498 195 aa15.2■□□□□ 0.02
SFSWAP-210ENST00000541286 KRT5P13647 590 aa15.2■□□□□ 0.02
SFSWAP-210ENST00000541286 C3orf20Q8ND61 904 aa15.2■□□□□ 0.02
SFSWAP-210ENST00000541286 NAP1L3Q99457 506 aaPredicted RBP15.2■□□□□ 0.02
SFSWAP-210ENST00000541286 SENP7Q9BQF6 1050 aa15.2■□□□□ 0.02
SFSWAP-210ENST00000541286 C16orf70Q9BSU1 422 aa15.2■□□□□ 0.02
SFSWAP-210ENST00000541286 UNC93B1Q9H1C4 597 aa15.2■□□□□ 0.02
SFSWAP-210ENST00000541286 VTA1Q9NP79 307 aa15.2■□□□□ 0.02
SFSWAP-210ENST00000541286 KCNK9Q9NPC2 374 aa15.2■□□□□ 0.02
SFSWAP-210ENST00000541286 XPNPEP1Q9NQW7 623 aa15.2■□□□□ 0.02
SFSWAP-210ENST00000541286 DIS3Q9Y2L1 958 aaKnown RBP15.2■□□□□ 0.02
SFSWAP-210ENST00000541286 CHD7Q9P2D1 2997 aa15.2■□□□□ 0.02
SFSWAP-210ENST00000541286 DPPA5A6NC42 116 aa15.19■□□□□ 0.02
SFSWAP-210ENST00000541286 ZBTB42B2RXF5 422 aa15.19■□□□□ 0.02
SFSWAP-210ENST00000541286 DNAJC8O75937 253 aaPredicted RBP15.19■□□□□ 0.02
SFSWAP-210ENST00000541286 GH1P01241 217 aa15.19■□□□□ 0.02
SFSWAP-210ENST00000541286 MMP3P08254 477 aa15.19■□□□□ 0.02
SFSWAP-210ENST00000541286 LINGO3P0C6S8 592 aa15.19■□□□□ 0.02
SFSWAP-210ENST00000541286 RPL21P46778 160 aaKnown RBP15.19■□□□□ 0.02
SFSWAP-210ENST00000541286 CTCFP49711 727 aaPredicted RBP15.19■□□□□ 0.02
SFSWAP-210ENST00000541286 PEX3P56589 373 aa15.19■□□□□ 0.02
SFSWAP-210ENST00000541286 PTENP60484 403 aa15.19■□□□□ 0.02
SFSWAP-210ENST00000541286 ANKRD20A2Q5SQ80 823 aa15.19■□□□□ 0.02
SFSWAP-210ENST00000541286 ANKRD20A1Q5TYW2 823 aa15.19■□□□□ 0.02
SFSWAP-210ENST00000541286 ANKRD20A3Q5VUR7 823 aa15.19■□□□□ 0.02
SFSWAP-210ENST00000541286 DAB2IPQ5VWQ8 1189 aa15.19■□□□□ 0.02
SFSWAP-210ENST00000541286 XRRA1Q6P2D8 792 aa15.19■□□□□ 0.02
SFSWAP-210ENST00000541286 HOOK3Q86VS8 718 aa15.19■□□□□ 0.02
SFSWAP-210ENST00000541286 RASGEF1CQ8N431 466 aa15.19■□□□□ 0.02
SFSWAP-210ENST00000541286 ATP8B4Q8TF62 1192 aa15.19■□□□□ 0.02
SFSWAP-210ENST00000541286 ZNF653Q96CK0 615 aa15.19■□□□□ 0.02
SFSWAP-210ENST00000541286 CDHR1Q96JP9 859 aa15.19■□□□□ 0.02
SFSWAP-210ENST00000541286 FAM49AQ9H0Q0 323 aaPredicted RBP15.19■□□□□ 0.02
SFSWAP-210ENST00000541286 EBF2Q9HAK2 575 aa15.19■□□□□ 0.02
SFSWAP-210ENST00000541286 ASIC3Q9UHC3 531 aa15.19■□□□□ 0.02
SFSWAP-210ENST00000541286 SMNDC1O75940 238 aaKnown RBP eCLIP15.19■□□□□ 0.021e-14■■■■□ 22.7
SFSWAP-210ENST00000541286 PYGMP11217 842 aa15.19■□□□□ 0.02
SFSWAP-210ENST00000541286 VAMP7P51809 220 aa15.19■□□□□ 0.02
SFSWAP-210ENST00000541286 SLC47A2Q86VL8 602 aa15.19■□□□□ 0.02
SFSWAP-210ENST00000541286 RNF25Q96BH1 459 aaPredicted RBP15.19■□□□□ 0.02
SFSWAP-210ENST00000541286 RNF19AQ9NV58 838 aa15.19■□□□□ 0.02
SFSWAP-210ENST00000541286 TBK1Q9UHD2 729 aa15.19■□□□□ 0.02
SFSWAP-210ENST00000541286 C5orf42Q9H799 3197 aa15.19■□□□□ 0.02
SFSWAP-210ENST00000541286 H3BRB1 525 aa15.19■□□□□ 0.02
SFSWAP-210ENST00000541286 CES2O00748 559 aa15.19■□□□□ 0.02
SFSWAP-210ENST00000541286 HSPA1AP0DMV8 641 aaKnown RBP15.19■□□□□ 0.02
SFSWAP-210ENST00000541286 HSPA1BP0DMV9 641 aaKnown RBP15.19■□□□□ 0.02
SFSWAP-210ENST00000541286 GNAT1P11488 350 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms