RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 TRIM11Q96F44 468 aa10.11□□□□□ -0.79
CNOT4-212ENST00000541284 STAMBPL1Q96FJ0 436 aa10.11□□□□□ -0.79
CNOT4-212ENST00000541284 SCLT1Q96NL6 688 aa10.11□□□□□ -0.79
CNOT4-212ENST00000541284 SLITRK1Q96PX8 696 aa10.11□□□□□ -0.79
CNOT4-212ENST00000541284 TACO1Q9BSH4 297 aaKnown RBP10.11□□□□□ -0.79
CNOT4-212ENST00000541284 RXFP1Q9HBX9 757 aa10.11□□□□□ -0.79
CNOT4-212ENST00000541284 CYP26B1Q9NR63 512 aa10.11□□□□□ -0.79
CNOT4-212ENST00000541284 C1orf112Q9NSG2 853 aa10.11□□□□□ -0.79
CNOT4-212ENST00000541284 KLHL11Q9NVR0 708 aa10.11□□□□□ -0.79
CNOT4-212ENST00000541284 PIM2Q9P1W9 311 aa10.11□□□□□ -0.79
CNOT4-212ENST00000541284 DNPEPQ9ULA0 475 aa10.11□□□□□ -0.79
CNOT4-212ENST00000541284 NUMBLQ9Y6R0 609 aa10.11□□□□□ -0.79
CNOT4-212ENST00000541284 CDH16O75309 829 aa10.11□□□□□ -0.79
CNOT4-212ENST00000541284 KRT10P13645 584 aa10.11□□□□□ -0.79
CNOT4-212ENST00000541284 ADCY8P40145 1251 aa10.11□□□□□ -0.79
CNOT4-212ENST00000541284 SP2Q02086 613 aa10.11□□□□□ -0.79
CNOT4-212ENST00000541284 NEDD9Q14511 834 aa10.11□□□□□ -0.79
CNOT4-212ENST00000541284 ZNF276Q8N554 614 aa10.11□□□□□ -0.79
CNOT4-212ENST00000541284 TCP11Q8WWU5 503 aa10.11□□□□□ -0.79
CNOT4-212ENST00000541284 VCPIP1Q96JH7 1222 aa10.11□□□□□ -0.79
CNOT4-212ENST00000541284 TGS1Q96RS0 853 aaKnown RBP10.11□□□□□ -0.79
CNOT4-212ENST00000541284 POLR3FQ9H1D9 316 aaPredicted RBP10.11□□□□□ -0.79
CNOT4-212ENST00000541284 KIF9Q9HAQ2 790 aa10.11□□□□□ -0.79
CNOT4-212ENST00000541284 TBK1Q9UHD2 729 aa10.11□□□□□ -0.79
CNOT4-212ENST00000541284 TMEM191CA6NGB0 347 aa10.11□□□□□ -0.79
CNOT4-212ENST00000541284 TTLL13PA6NNM8 815 aa10.11□□□□□ -0.79
CNOT4-212ENST00000541284 DNALI1O14645 258 aaPredicted RBP10.11□□□□□ -0.79
CNOT4-212ENST00000541284 DGAT1O75907 488 aa10.11□□□□□ -0.79
CNOT4-212ENST00000541284 GAS8O95995 478 aa10.11□□□□□ -0.79
CNOT4-212ENST00000541284 TMEM191BP0C7N4 346 aa10.11□□□□□ -0.79
CNOT4-212ENST00000541284 MMP8P22894 467 aa10.11□□□□□ -0.79
CNOT4-212ENST00000541284 MAGEA4P43358 317 aa10.11□□□□□ -0.79
CNOT4-212ENST00000541284 BAG6P46379 1132 aa10.11□□□□□ -0.79
CNOT4-212ENST00000541284 ACOT2P49753 483 aa10.11□□□□□ -0.79
CNOT4-212ENST00000541284 PRKCEQ02156 737 aa10.11□□□□□ -0.79
CNOT4-212ENST00000541284 P3H1Q32P28 736 aa10.11□□□□□ -0.79
CNOT4-212ENST00000541284 RGS9BPQ6ZS82 235 aa10.11□□□□□ -0.79
CNOT4-212ENST00000541284 SRRM1Q8IYB3 904 aaKnown RBP10.11□□□□□ -0.79
CNOT4-212ENST00000541284 ATG4CQ96DT6 458 aa10.11□□□□□ -0.79
CNOT4-212ENST00000541284 PLVAPQ9BX97 442 aa10.11□□□□□ -0.79
CNOT4-212ENST00000541284 KIAA1586Q9HCI6 787 aa10.11□□□□□ -0.79
CNOT4-212ENST00000541284 CYLDQ9NQC7 956 aa10.11□□□□□ -0.79
CNOT4-212ENST00000541284 NR3C2P08235 984 aa10.1□□□□□ -0.79
CNOT4-212ENST00000541284 CLTAP09496 248 aa10.1□□□□□ -0.79
CNOT4-212ENST00000541284 POTEJP0CG39 1038 aa10.1□□□□□ -0.79
CNOT4-212ENST00000541284 ELF1P32519 619 aa10.1□□□□□ -0.79
CNOT4-212ENST00000541284 NSFP46459 744 aaKnown RBP10.1□□□□□ -0.79
CNOT4-212ENST00000541284 C1QBPQ07021 282 aaKnown RBP10.1□□□□□ -0.79
CNOT4-212ENST00000541284 CCDC15Q0P6D6 951 aa10.1□□□□□ -0.79
CNOT4-212ENST00000541284 STAT4Q14765 748 aa10.1□□□□□ -0.79
CNOT4-212ENST00000541284 ZKSCAN8Q15776 578 aaPredicted RBP10.1□□□□□ -0.79
CNOT4-212ENST00000541284 SWSAP1Q6NVH7 229 aa10.1□□□□□ -0.79
CNOT4-212ENST00000541284 MFSD7Q6UXD7 560 aa10.1□□□□□ -0.79
CNOT4-212ENST00000541284 KIF2BQ8N4N8 673 aa10.1□□□□□ -0.79
CNOT4-212ENST00000541284 WDTC1Q8N5D0 677 aa10.1□□□□□ -0.79
CNOT4-212ENST00000541284 ALLCQ8N6M5 410 aa10.1□□□□□ -0.79
CNOT4-212ENST00000541284 RPAP3Q9H6T3 665 aaPredicted RBP10.1□□□□□ -0.79
CNOT4-212ENST00000541284 L3MBTL1Q9Y468 752 aa10.1□□□□□ -0.79
CNOT4-212ENST00000541284 PI4K2BG5E9Z4 385 aa10.1□□□□□ -0.79
CNOT4-212ENST00000541284 PRPF4O43172 522 aaKnown RBP eCLIP10.1□□□□□ -0.79
CNOT4-212ENST00000541284 TYROBPO43914 113 aa10.1□□□□□ -0.79
CNOT4-212ENST00000541284 SUN1O94901 812 aa10.1□□□□□ -0.79
CNOT4-212ENST00000541284 GLRA2P23416 452 aa10.1□□□□□ -0.79
CNOT4-212ENST00000541284 PTPN7P35236 360 aa10.1□□□□□ -0.79
CNOT4-212ENST00000541284 HIRAP54198 1017 aaPredicted RBP10.1□□□□□ -0.79
CNOT4-212ENST00000541284 GAD2Q05329 585 aa10.1□□□□□ -0.79
CNOT4-212ENST00000541284 NFX1Q12986 1120 aaKnown RBP10.1□□□□□ -0.79
CNOT4-212ENST00000541284 MTMR2Q13614 643 aa10.1□□□□□ -0.79
CNOT4-212ENST00000541284 RNASEH2BQ5TBB1 312 aaKnown RBP10.1□□□□□ -0.79
CNOT4-212ENST00000541284 XRRA1Q6P2D8 792 aa10.1□□□□□ -0.79
CNOT4-212ENST00000541284 LBX2Q6XYB7 198 aa10.1□□□□□ -0.79
CNOT4-212ENST00000541284 MZB1Q8WU39 189 aa10.1□□□□□ -0.79
CNOT4-212ENST00000541284 RBM15Q96T37 977 aaKnown RBP eCLIP10.1□□□□□ -0.791e-6■■■□□ 18.6
CNOT4-212ENST00000541284 ADAM22Q9P0K1 906 aa10.1□□□□□ -0.79
CNOT4-212ENST00000541284 ZNF214Q9UL59 606 aaPredicted RBP10.1□□□□□ -0.79
CNOT4-212ENST00000541284 PECAM1P16284 738 aaPredicted RBP10.1□□□□□ -0.79
CNOT4-212ENST00000541284 ATP5DP30049 168 aa10.1□□□□□ -0.79
CNOT4-212ENST00000541284 SLC18A1P54219 525 aa10.1□□□□□ -0.79
CNOT4-212ENST00000541284 GPX6P59796 221 aa10.1□□□□□ -0.79
CNOT4-212ENST00000541284 MKRN3Q13064 507 aaKnown RBP10.1□□□□□ -0.79
CNOT4-212ENST00000541284 ARHGEF16Q5VV41 709 aa10.1□□□□□ -0.79
CNOT4-212ENST00000541284 ARFGAP1Q8N6T3 406 aa10.1□□□□□ -0.79
CNOT4-212ENST00000541284 CCDC89Q8N998 374 aa10.1□□□□□ -0.79
CNOT4-212ENST00000541284 RBBP8NLQ8NC74 664 aaPredicted RBP10.1□□□□□ -0.79
CNOT4-212ENST00000541284 FEZF2Q8TBJ5 459 aa10.1□□□□□ -0.79
CNOT4-212ENST00000541284 FARP1Q9Y4F1 1045 aaPredicted RBP10.1□□□□□ -0.79
CNOT4-212ENST00000541284 IVNS1ABPQ9Y6Y0 642 aa10.1□□□□□ -0.79
CNOT4-212ENST00000541284 CLUHO75153 1309 aa10.1□□□□□ -0.79
CNOT4-212ENST00000541284 MCM3APO60318 1980 aa10.1□□□□□ -0.79
CNOT4-212ENST00000541284 A0A0B4J269 797 aa10.09□□□□□ -0.79
CNOT4-212ENST00000541284 T-ENOLP0DO92 83 aa10.09□□□□□ -0.79
CNOT4-212ENST00000541284 GNA15P30679 374 aa10.09□□□□□ -0.79
CNOT4-212ENST00000541284 SLC8A1P32418 973 aa10.09□□□□□ -0.79
CNOT4-212ENST00000541284 ARL2P36404 184 aa10.09□□□□□ -0.79
CNOT4-212ENST00000541284 OAZ1P54368 228 aa10.09□□□□□ -0.79
CNOT4-212ENST00000541284 ACTR2P61160 394 aa10.09□□□□□ -0.79
CNOT4-212ENST00000541284 ADCY1Q08828 1119 aa10.09□□□□□ -0.79
CNOT4-212ENST00000541284 TRIM72Q6ZMU5 477 aa10.09□□□□□ -0.79
CNOT4-212ENST00000541284 NLRX1Q86UT6 975 aa10.09□□□□□ -0.79
CNOT4-212ENST00000541284 CEP57Q86XR8 500 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms