RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 RNF135Q8IUD6 432 aa14.14□□□□□ -0.15
LTBR-208ENST00000541005 TCEAL8Q8IYN2 117 aa14.14□□□□□ -0.15
LTBR-208ENST00000541005 SLC7A14Q8TBB6 771 aa14.14□□□□□ -0.15
LTBR-208ENST00000541005 NOC3LQ8WTT2 800 aaKnown RBP14.14□□□□□ -0.15
LTBR-208ENST00000541005 KHSRPQ92945 711 aaKnown RBP eCLIP14.14□□□□□ -0.15
LTBR-208ENST00000541005 ANKRD36BP1Q96IX9 119 aa14.14□□□□□ -0.15
LTBR-208ENST00000541005 RPGRIP1Q96KN7 1286 aa14.14□□□□□ -0.15
LTBR-208ENST00000541005 GSDMAQ96QA5 445 aa14.14□□□□□ -0.15
LTBR-208ENST00000541005 CGRRF1Q99675 332 aa14.14□□□□□ -0.15
LTBR-208ENST00000541005 GZF1Q9H116 711 aaPredicted RBP14.14□□□□□ -0.15
LTBR-208ENST00000541005 RMND1Q9NWS8 449 aa14.14□□□□□ -0.15
LTBR-208ENST00000541005 AFF4Q9UHB7 1163 aaKnown RBP14.14□□□□□ -0.15
LTBR-208ENST00000541005 ZNF318Q5VUA4 2279 aa14.13□□□□□ -0.15
LTBR-208ENST00000541005 ZNF638Q14966 1978 aaKnown RBP14.13□□□□□ -0.15
LTBR-208ENST00000541005 KPNA7A9QM74 516 aa14.13□□□□□ -0.15
LTBR-208ENST00000541005 EXOC3O60645 756 aa14.13□□□□□ -0.15
LTBR-208ENST00000541005 TNNC2P02585 160 aa14.13□□□□□ -0.15
LTBR-208ENST00000541005 NR3C1P04150 777 aa14.13□□□□□ -0.15
LTBR-208ENST00000541005 CLDN10P78369 228 aa14.13□□□□□ -0.15
LTBR-208ENST00000541005 RBP5P82980 135 aa14.13□□□□□ -0.15
LTBR-208ENST00000541005 ZCWPW2Q504Y3 356 aa14.13□□□□□ -0.15
LTBR-208ENST00000541005 ZDHHC14Q8IZN3 488 aa14.13□□□□□ -0.15
LTBR-208ENST00000541005 TDRD5Q8NAT2 981 aaKnown RBP14.13□□□□□ -0.15
LTBR-208ENST00000541005 OR5B17Q8NGF7 314 aa14.13□□□□□ -0.15
LTBR-208ENST00000541005 SPATA18Q8TC71 538 aa14.13□□□□□ -0.15
LTBR-208ENST00000541005 FAM84AQ96KN4 292 aa14.13□□□□□ -0.15
LTBR-208ENST00000541005 GTPBP4Q9BZE4 634 aaKnown RBP14.13□□□□□ -0.15
LTBR-208ENST00000541005 GDAP2Q9NXN4 497 aa14.13□□□□□ -0.15
LTBR-208ENST00000541005 HOOK1Q9UJC3 728 aaKnown RBP14.13□□□□□ -0.15
LTBR-208ENST00000541005 AGAP1Q9UPQ3 857 aa14.13□□□□□ -0.15
LTBR-208ENST00000541005 TIMM13Q9Y5L4 95 aaPredicted RBP14.13□□□□□ -0.15
LTBR-208ENST00000541005 MYH10P35580 1976 aa14.13□□□□□ -0.15
LTBR-208ENST00000541005 ZDBF2Q9HCK1 2354 aa14.12□□□□□ -0.15
LTBR-208ENST00000541005 NUP210Q8TEM1 1887 aaPredicted RBP14.12□□□□□ -0.15
LTBR-208ENST00000541005 C2CD4DB7Z1M9 353 aa14.12□□□□□ -0.15
LTBR-208ENST00000541005 CYB561D2O14569 222 aa14.12□□□□□ -0.15
LTBR-208ENST00000541005 MAPK13O15264 365 aa14.12□□□□□ -0.15
LTBR-208ENST00000541005 DCXO43602 365 aa14.12□□□□□ -0.15
LTBR-208ENST00000541005 CALUO43852 315 aaPredicted RBP14.12□□□□□ -0.15
LTBR-208ENST00000541005 KINO60870 393 aaKnown RBP14.12□□□□□ -0.15
LTBR-208ENST00000541005 XYLBO75191 536 aa14.12□□□□□ -0.15
LTBR-208ENST00000541005 GADD45BO75293 160 aaPredicted RBP14.12□□□□□ -0.15
LTBR-208ENST00000541005 SMC2O95347 1197 aa14.12□□□□□ -0.15
LTBR-208ENST00000541005 GPR17Q13304 367 aa14.12□□□□□ -0.15
LTBR-208ENST00000541005 LMBRD2Q68DH5 695 aaPredicted RBP14.12□□□□□ -0.15
LTBR-208ENST00000541005 OTOP3Q7RTS5 596 aa14.12□□□□□ -0.15
LTBR-208ENST00000541005 CSGALNACT2Q8N6G5 542 aa14.12□□□□□ -0.15
LTBR-208ENST00000541005 RDH13Q8NBN7 331 aa14.12□□□□□ -0.15
LTBR-208ENST00000541005 FNBP1Q96RU3 617 aa14.12□□□□□ -0.15
LTBR-208ENST00000541005 RTP3Q9BQQ7 232 aa14.12□□□□□ -0.15
LTBR-208ENST00000541005 SEC24AO95486 1093 aa14.11□□□□□ -0.15
LTBR-208ENST00000541005 VNN2O95498 520 aa14.11□□□□□ -0.15
LTBR-208ENST00000541005 DLATP10515 647 aaKnown RBP14.11□□□□□ -0.15
LTBR-208ENST00000541005 ALADP13716 330 aa14.11□□□□□ -0.15
LTBR-208ENST00000541005 CPB1P15086 417 aa14.11□□□□□ -0.15
LTBR-208ENST00000541005 AP3M2P53677 418 aa14.11□□□□□ -0.15
LTBR-208ENST00000541005 UBE2HP62256 183 aa14.11□□□□□ -0.15
LTBR-208ENST00000541005 ENPEPQ07075 957 aa14.11□□□□□ -0.15
LTBR-208ENST00000541005 ADCY1Q08828 1119 aa14.11□□□□□ -0.15
LTBR-208ENST00000541005 BFSP1Q12934 665 aa14.11□□□□□ -0.15
LTBR-208ENST00000541005 EDRF1Q3B7T1 1238 aa14.11□□□□□ -0.15
LTBR-208ENST00000541005 ZNF658Q5TYW1 1059 aaPredicted RBP14.11□□□□□ -0.15
LTBR-208ENST00000541005 WSCD1Q658N2 575 aa14.11□□□□□ -0.15
LTBR-208ENST00000541005 SCARA3Q6AZY7 606 aa14.11□□□□□ -0.15
LTBR-208ENST00000541005 CLEC17AQ6ZS10 378 aa14.11□□□□□ -0.15
LTBR-208ENST00000541005 TRAPPC11Q7Z392 1133 aa14.11□□□□□ -0.15
LTBR-208ENST00000541005 LIMS2Q7Z4I7 341 aa14.11□□□□□ -0.15
LTBR-208ENST00000541005 METTL23Q86XA0 190 aa14.11□□□□□ -0.15
LTBR-208ENST00000541005 TMEM86AQ8N2M4 240 aa14.11□□□□□ -0.15
LTBR-208ENST00000541005 PLCD3Q8N3E9 789 aa14.11□□□□□ -0.15
LTBR-208ENST00000541005 OR10T2Q8NGX3 314 aa14.11□□□□□ -0.15
LTBR-208ENST00000541005 PLEKHO2Q8TD55 490 aa14.11□□□□□ -0.15
LTBR-208ENST00000541005 PARD3BQ8TEW8 1205 aa14.11□□□□□ -0.15
LTBR-208ENST00000541005 SMARCE1Q969G3 411 aa14.11□□□□□ -0.15
LTBR-208ENST00000541005 CCDC127Q96BQ5 260 aa14.11□□□□□ -0.15
LTBR-208ENST00000541005 ZCWPW1Q9H0M4 648 aa14.11□□□□□ -0.15
LTBR-208ENST00000541005 PIDD1Q9HB75 910 aa14.11□□□□□ -0.15
LTBR-208ENST00000541005 AVENQ9NQS1 362 aaPredicted RBP14.11□□□□□ -0.15
LTBR-208ENST00000541005 TSHZ2Q9NRE2 1034 aa14.11□□□□□ -0.15
LTBR-208ENST00000541005 HSFX1Q9UBD0 423 aa14.11□□□□□ -0.15
LTBR-208ENST00000541005 MUTYHQ9UIF7 546 aa14.11□□□□□ -0.15
LTBR-208ENST00000541005 PCDHA5Q9Y5H7 936 aa14.11□□□□□ -0.15
LTBR-208ENST00000541005 INSL5Q9Y5Q6 135 aa14.11□□□□□ -0.15
LTBR-208ENST00000541005 TRIOO75962 3097 aa14.1□□□□□ -0.15
LTBR-208ENST00000541005 ANAPC1Q9H1A4 1944 aa14.1□□□□□ -0.15
LTBR-208ENST00000541005 PRRG1O14668 218 aa14.1□□□□□ -0.15
LTBR-208ENST00000541005 CCL16O15467 120 aa14.1□□□□□ -0.15
LTBR-208ENST00000541005 N4BP1O75113 896 aaKnown RBP14.1□□□□□ -0.15
LTBR-208ENST00000541005 STAU1O95793 577 aaKnown RBP14.1□□□□□ -0.15
LTBR-208ENST00000541005 KRT19P08727 400 aa14.1□□□□□ -0.15
LTBR-208ENST00000541005 TNNI1P19237 187 aa14.1□□□□□ -0.15
LTBR-208ENST00000541005 SP100P23497 879 aaPredicted RBP14.1□□□□□ -0.15
LTBR-208ENST00000541005 NR2F2P24468 414 aa14.1□□□□□ -0.15
LTBR-208ENST00000541005 ELF1P32519 619 aa14.1□□□□□ -0.15
LTBR-208ENST00000541005 CASP4P49662 377 aa14.1□□□□□ -0.15
LTBR-208ENST00000541005 ARPP19P56211 112 aa14.1□□□□□ -0.15
LTBR-208ENST00000541005 MCCD1P59942 119 aaPredicted RBP14.1□□□□□ -0.15
LTBR-208ENST00000541005 MYO1EQ12965 1108 aa14.1□□□□□ -0.15
LTBR-208ENST00000541005 RNF19BQ6ZMZ0 732 aa14.1□□□□□ -0.15
LTBR-208ENST00000541005 PDCL2Q8N4E4 241 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms