RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 ADRB2P07550 413 aa7.97□□□□□ -1.13
YBX3-209ENST00000540747 OR4Q2P0C623 313 aa7.97□□□□□ -1.13
YBX3-209ENST00000540747 GUCY2CP25092 1073 aa7.97□□□□□ -1.13
YBX3-209ENST00000540747 MCM4P33991 863 aa7.97□□□□□ -1.13
YBX3-209ENST00000540747 CCT6AP40227 531 aaKnown RBP7.97□□□□□ -1.13
YBX3-209ENST00000540747 RAP1GAPP47736 663 aa7.97□□□□□ -1.13
YBX3-209ENST00000540747 TRAPPC10P48553 1259 aa7.97□□□□□ -1.13
YBX3-209ENST00000540747 FOSBP53539 338 aa7.97□□□□□ -1.13
YBX3-209ENST00000540747 MCL1Q07820 350 aa7.97□□□□□ -1.13
YBX3-209ENST00000540747 DMP1Q13316 513 aaPredicted RBP7.97□□□□□ -1.13
YBX3-209ENST00000540747 NOLC1Q14978 699 aaKnown RBP eCLIP7.97□□□□□ -1.13
YBX3-209ENST00000540747 PLA2G2CQ5R387 149 aa7.97□□□□□ -1.13
YBX3-209ENST00000540747 TTC38Q5R3I4 469 aa7.97□□□□□ -1.13
YBX3-209ENST00000540747 CENPPQ6IPU0 288 aa7.97□□□□□ -1.13
YBX3-209ENST00000540747 RINT1Q6NUQ1 792 aa7.97□□□□□ -1.13
YBX3-209ENST00000540747 PKN3Q6P5Z2 889 aa7.97□□□□□ -1.13
YBX3-209ENST00000540747 PRR23BQ6ZRT6 265 aa7.97□□□□□ -1.13
YBX3-209ENST00000540747 ARID3BQ8IVW6 561 aaPredicted RBP7.97□□□□□ -1.13
YBX3-209ENST00000540747 ELMOD1Q8N336 334 aa7.97□□□□□ -1.13
YBX3-209ENST00000540747 SYNPOQ8N3V7 929 aa7.97□□□□□ -1.13
YBX3-209ENST00000540747 TTC9BQ8N6N2 239 aa7.97□□□□□ -1.13
YBX3-209ENST00000540747 TMEM161BQ8NDZ6 487 aa7.97□□□□□ -1.13
YBX3-209ENST00000540747 PSMG2Q969U7 264 aa7.97□□□□□ -1.13
YBX3-209ENST00000540747 LOXL4Q96JB6 756 aa7.97□□□□□ -1.13
YBX3-209ENST00000540747 MMTAG2Q9BU76 263 aaKnown RBP7.97□□□□□ -1.13
YBX3-209ENST00000540747 OXCT2Q9BYC2 517 aaPredicted RBP7.97□□□□□ -1.13
YBX3-209ENST00000540747 PLEKHA5Q9HAU0 1116 aa7.97□□□□□ -1.13
YBX3-209ENST00000540747 IL21Q9HBE4 155 aa7.97□□□□□ -1.13
YBX3-209ENST00000540747 RXFP3Q9NSD7 469 aa7.97□□□□□ -1.13
YBX3-209ENST00000540747 DDX19AQ9NUU7 478 aaKnown RBP7.97□□□□□ -1.13
YBX3-209ENST00000540747 HSFX1Q9UBD0 423 aa7.97□□□□□ -1.13
YBX3-209ENST00000540747 KIAA1024Q9UPX6 916 aa7.97□□□□□ -1.13
YBX3-209ENST00000540747 NUP210Q8TEM1 1887 aaPredicted RBP7.97□□□□□ -1.13
YBX3-209ENST00000540747 GREB1Q4ZG55 1949 aa7.97□□□□□ -1.13
YBX3-209ENST00000540747 DMXL2Q8TDJ6 3036 aa7.96□□□□□ -1.13
YBX3-209ENST00000540747 MTMR11A4FU01 709 aa7.96□□□□□ -1.14
YBX3-209ENST00000540747 CCDC169A6NNP5 214 aa7.96□□□□□ -1.14
YBX3-209ENST00000540747 PP2D1A8MPX8 630 aa7.96□□□□□ -1.14
YBX3-209ENST00000540747 E9PMD0 336 aa7.96□□□□□ -1.14
YBX3-209ENST00000540747 PPEF2O14830 753 aa7.96□□□□□ -1.14
YBX3-209ENST00000540747 SLC16A4O15374 487 aa7.96□□□□□ -1.14
YBX3-209ENST00000540747 EXTL3O43909 919 aa7.96□□□□□ -1.14
YBX3-209ENST00000540747 EPN2O95208 641 aa7.96□□□□□ -1.14
YBX3-209ENST00000540747 ZNF806P0C7X5 589 aa7.96□□□□□ -1.14
YBX3-209ENST00000540747 CXCL8P10145 99 aa7.96□□□□□ -1.14
YBX3-209ENST00000540747 MAPTP10636 758 aaKnown RBP7.96□□□□□ -1.14
YBX3-209ENST00000540747 CPB1P15086 417 aa7.96□□□□□ -1.14
YBX3-209ENST00000540747 TYMPP19971 482 aa7.96□□□□□ -1.14
YBX3-209ENST00000540747 CYP3A5P20815 502 aa7.96□□□□□ -1.14
YBX3-209ENST00000540747 TOB1P50616 345 aaPredicted RBP7.96□□□□□ -1.14
YBX3-209ENST00000540747 GUCY1B3Q02153 619 aa7.96□□□□□ -1.14
YBX3-209ENST00000540747 YWHAHQ04917 246 aaPredicted RBP7.96□□□□□ -1.14
YBX3-209ENST00000540747 DUSP4Q13115 394 aa7.96□□□□□ -1.14
YBX3-209ENST00000540747 PLD1Q13393 1074 aa7.96□□□□□ -1.14
YBX3-209ENST00000540747 TRIM29Q14134 588 aa7.96□□□□□ -1.14
YBX3-209ENST00000540747 MYBPC2Q14324 1141 aa7.96□□□□□ -1.14
YBX3-209ENST00000540747 NBR1Q14596 966 aa7.96□□□□□ -1.14
YBX3-209ENST00000540747 IL17AQ16552 155 aa7.96□□□□□ -1.14
YBX3-209ENST00000540747 ARHGAP29Q52LW3 1261 aa7.96□□□□□ -1.14
YBX3-209ENST00000540747 SEZ6Q53EL9 994 aa7.96□□□□□ -1.14
YBX3-209ENST00000540747 HYIQ5T013 277 aa7.96□□□□□ -1.14
YBX3-209ENST00000540747 ZPBP2Q6X784 338 aa7.96□□□□□ -1.14
YBX3-209ENST00000540747 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.96□□□□□ -1.14
YBX3-209ENST00000540747 FBXO18Q8NFZ0 1043 aa7.96□□□□□ -1.14
YBX3-209ENST00000540747 CSGALNACT1Q8TDX6 532 aa7.96□□□□□ -1.14
YBX3-209ENST00000540747 SNX29Q8TEQ0 813 aa7.96□□□□□ -1.14
YBX3-209ENST00000540747 GAB3Q8WWW8 586 aa7.96□□□□□ -1.14
YBX3-209ENST00000540747 DDX1Q92499 740 aaKnown RBP7.96□□□□□ -1.14
YBX3-209ENST00000540747 ZFYVE19Q96K21 471 aa7.96□□□□□ -1.14
YBX3-209ENST00000540747 DRC1Q96MC2 740 aa7.96□□□□□ -1.14
YBX3-209ENST00000540747 TIPINQ9BVW5 301 aa7.96□□□□□ -1.14
YBX3-209ENST00000540747 KMT5AQ9NQR1 393 aa7.96□□□□□ -1.14
YBX3-209ENST00000540747 GTSE1Q9NYZ3 720 aa7.96□□□□□ -1.14
YBX3-209ENST00000540747 LRWD1Q9UFC0 647 aa7.96□□□□□ -1.14
YBX3-209ENST00000540747 ASB3Q9Y575 518 aa7.96□□□□□ -1.14
YBX3-209ENST00000540747 TIMM13Q9Y5L4 95 aaPredicted RBP7.96□□□□□ -1.14
YBX3-209ENST00000540747 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.96□□□□□ -1.14
YBX3-209ENST00000540747 ITPR1Q14643 2758 aa7.96□□□□□ -1.14
YBX3-209ENST00000540747 TSC2P49815 1807 aa7.96□□□□□ -1.14
YBX3-209ENST00000540747 SOAT2O75908 522 aa7.95□□□□□ -1.14
YBX3-209ENST00000540747 AKAP3O75969 853 aa7.95□□□□□ -1.14
YBX3-209ENST00000540747 PIGRP01833 764 aa7.95□□□□□ -1.14
YBX3-209ENST00000540747 CYP11A1P05108 521 aa7.95□□□□□ -1.14
YBX3-209ENST00000540747 CLTAP09496 248 aa7.95□□□□□ -1.14
YBX3-209ENST00000540747 ATF6P18850 670 aa7.95□□□□□ -1.14
YBX3-209ENST00000540747 U2AF2P26368 475 aaKnown RBP eCLIP7.95□□□□□ -1.14
YBX3-209ENST00000540747 KPNA1P52294 538 aaPredicted RBP7.95□□□□□ -1.14
YBX3-209ENST00000540747 EPHB3P54753 998 aa7.95□□□□□ -1.14
YBX3-209ENST00000540747 PLCB2Q00722 1185 aa7.95□□□□□ -1.14
YBX3-209ENST00000540747 TNK2Q07912 1038 aa7.95□□□□□ -1.14
YBX3-209ENST00000540747 PON2Q15165 354 aa7.95□□□□□ -1.14
YBX3-209ENST00000540747 SAFBQ15424 915 aaKnown RBP eCLIP7.95□□□□□ -1.14
YBX3-209ENST00000540747 SF3A2Q15428 464 aaKnown RBP7.95□□□□□ -1.14
YBX3-209ENST00000540747 ENOX2Q16206 610 aaKnown RBP7.95□□□□□ -1.14
YBX3-209ENST00000540747 TMEM196Q5HYL7 178 aa7.95□□□□□ -1.14
YBX3-209ENST00000540747 N4BP2L1Q5TBK1 243 aaPredicted RBP7.95□□□□□ -1.14
YBX3-209ENST00000540747 HEATR6Q6AI08 1181 aaKnown RBP7.95□□□□□ -1.14
YBX3-209ENST00000540747 FSTL4Q6MZW2 842 aa7.95□□□□□ -1.14
YBX3-209ENST00000540747 DNAJB7Q7Z6W7 309 aaPredicted RBP7.95□□□□□ -1.14
YBX3-209ENST00000540747 TMEM150AQ86TG1 271 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms