RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 LSM14BQ9BX40 385 aaKnown RBP11.41□□□□□ -0.58
ATL3-204ENST00000540699 ALG13Q9NP73 1137 aaKnown RBP11.41□□□□□ -0.58
ATL3-204ENST00000540699 SIX2Q9NPC8 291 aa11.41□□□□□ -0.58
ATL3-204ENST00000540699 PLCB1Q9NQ66 1216 aa11.41□□□□□ -0.58
ATL3-204ENST00000540699 TUBGCP4Q9UGJ1 667 aa11.41□□□□□ -0.58
ATL3-204ENST00000540699 TSC2P49815 1807 aa11.41□□□□□ -0.58
ATL3-204ENST00000540699 ANO9A1A5B4 782 aa11.4□□□□□ -0.58
ATL3-204ENST00000540699 CASTOR2A6NHX0 329 aa11.4□□□□□ -0.58
ATL3-204ENST00000540699 LRRIQ3A6PVS8 624 aaPredicted RBP11.4□□□□□ -0.58
ATL3-204ENST00000540699 F8W810 466 aa11.4□□□□□ -0.58
ATL3-204ENST00000540699 FSCN2O14926 492 aa11.4□□□□□ -0.58
ATL3-204ENST00000540699 P4HA2O15460 535 aa11.4□□□□□ -0.58
ATL3-204ENST00000540699 ZNF500O60304 480 aaPredicted RBP11.4□□□□□ -0.58
ATL3-204ENST00000540699 STX10O60499 249 aa11.4□□□□□ -0.58
ATL3-204ENST00000540699 TRIM21P19474 475 aaKnown RBP11.4□□□□□ -0.58
ATL3-204ENST00000540699 PON1P27169 355 aa11.4□□□□□ -0.58
ATL3-204ENST00000540699 KRT9P35527 623 aa11.4□□□□□ -0.58
ATL3-204ENST00000540699 OR1G1P47890 313 aa11.4□□□□□ -0.58
ATL3-204ENST00000540699 CLCNKBP51801 687 aa11.4□□□□□ -0.58
ATL3-204ENST00000540699 CLDN10P78369 228 aa11.4□□□□□ -0.58
ATL3-204ENST00000540699 ZBED6P86452 979 aa11.4□□□□□ -0.58
ATL3-204ENST00000540699 KRT17Q04695 432 aa11.4□□□□□ -0.58
ATL3-204ENST00000540699 PPP3CAQ08209 521 aa11.4□□□□□ -0.58
ATL3-204ENST00000540699 MEA1Q16626 185 aa11.4□□□□□ -0.58
ATL3-204ENST00000540699 EXOC3L4Q17RC7 722 aa11.4□□□□□ -0.58
ATL3-204ENST00000540699 PDE12Q6L8Q7 609 aaKnown RBP11.4□□□□□ -0.58
ATL3-204ENST00000540699 DCLRE1AQ6PJP8 1040 aa11.4□□□□□ -0.58
ATL3-204ENST00000540699 GBP6Q6ZN66 633 aa11.4□□□□□ -0.58
ATL3-204ENST00000540699 CXorf38Q8TB03 319 aa11.4□□□□□ -0.58
ATL3-204ENST00000540699 POF1BQ8WVV4 589 aa11.4□□□□□ -0.58
ATL3-204ENST00000540699 BAG1Q99933 345 aaPredicted RBP11.4□□□□□ -0.58
ATL3-204ENST00000540699 CRACR2AQ9BSW2 395 aa11.4□□□□□ -0.58
ATL3-204ENST00000540699 NAA15Q9BXJ9 866 aaKnown RBP11.4□□□□□ -0.58
ATL3-204ENST00000540699 EPHX3Q9H6B9 360 aa11.4□□□□□ -0.58
ATL3-204ENST00000540699 MMRN2Q9H8L6 949 aa11.4□□□□□ -0.58
ATL3-204ENST00000540699 GOLGA2P5Q9HBQ8 144 aa11.4□□□□□ -0.58
ATL3-204ENST00000540699 PDE11AQ9HCR9 933 aa11.4□□□□□ -0.58
ATL3-204ENST00000540699 KCND1Q9NSA2 647 aa11.4□□□□□ -0.58
ATL3-204ENST00000540699 FAM207AQ9NSI2 230 aaPredicted RBP11.4□□□□□ -0.58
ATL3-204ENST00000540699 CACNG4Q9UBN1 327 aa11.4□□□□□ -0.58
ATL3-204ENST00000540699 ADAM28Q9UKQ2 775 aa11.4□□□□□ -0.58
ATL3-204ENST00000540699 PRG3Q9Y2Y8 225 aaPredicted RBP11.4□□□□□ -0.58
ATL3-204ENST00000540699 LUC7L2Q9Y383 392 aaKnown RBP11.4□□□□□ -0.58
ATL3-204ENST00000540699 HCN4Q9Y3Q4 1203 aa11.4□□□□□ -0.58
ATL3-204ENST00000540699 MTCL1Q9Y4B5 1905 aaKnown RBP11.4□□□□□ -0.58
ATL3-204ENST00000540699 TRIOO75962 3097 aa11.39□□□□□ -0.59
ATL3-204ENST00000540699 PTPRJQ12913 1337 aa11.39□□□□□ -0.59
ATL3-204ENST00000540699 PODXLO00592 558 aa11.39□□□□□ -0.59
ATL3-204ENST00000540699 N4BP1O75113 896 aaKnown RBP11.39□□□□□ -0.59
ATL3-204ENST00000540699 KIF4AO95239 1232 aa11.39□□□□□ -0.59
ATL3-204ENST00000540699 SLC9A1P19634 815 aa11.39□□□□□ -0.59
ATL3-204ENST00000540699 MSNP26038 577 aaKnown RBP11.39□□□□□ -0.59
ATL3-204ENST00000540699 HNRNPH3P31942 346 aaKnown RBP11.39□□□□□ -0.59
ATL3-204ENST00000540699 AARSP49588 968 aaKnown RBP eCLIP11.39□□□□□ -0.59
ATL3-204ENST00000540699 MYL7Q01449 175 aa11.39□□□□□ -0.59
ATL3-204ENST00000540699 PTPROQ16827 1216 aa11.39□□□□□ -0.59
ATL3-204ENST00000540699 TMEM31Q5JXX7 168 aa11.39□□□□□ -0.59
ATL3-204ENST00000540699 KLHDC7AQ5VTJ3 777 aa11.39□□□□□ -0.59
ATL3-204ENST00000540699 WDR59Q6PJI9 974 aa11.39□□□□□ -0.59
ATL3-204ENST00000540699 WDR49Q8IV35 697 aa11.39□□□□□ -0.59
ATL3-204ENST00000540699 GPR65Q8IYL9 337 aa11.39□□□□□ -0.59
ATL3-204ENST00000540699 C3orf58Q8NDZ4 430 aa11.39□□□□□ -0.59
ATL3-204ENST00000540699 BEST2Q8NFU1 509 aa11.39□□□□□ -0.59
ATL3-204ENST00000540699 NEK11Q8NG66 645 aa11.39□□□□□ -0.59
ATL3-204ENST00000540699 OR8K1Q8NGG5 319 aa11.39□□□□□ -0.59
ATL3-204ENST00000540699 LMO3Q8TAP4 145 aa11.39□□□□□ -0.59
ATL3-204ENST00000540699 FAM212AQ96EL1 285 aa11.39□□□□□ -0.59
ATL3-204ENST00000540699 PCMTD1Q96MG8 357 aaPredicted RBP11.39□□□□□ -0.59
ATL3-204ENST00000540699 HERC2P3Q9BVR0 1158 aa11.39□□□□□ -0.59
ATL3-204ENST00000540699 ZBP1Q9H171 429 aa11.39□□□□□ -0.59
ATL3-204ENST00000540699 TLR9Q9NR96 1032 aa11.39□□□□□ -0.59
ATL3-204ENST00000540699 CHST7Q9NS84 486 aa11.39□□□□□ -0.59
ATL3-204ENST00000540699 GCNT4Q9P109 453 aa11.39□□□□□ -0.59
ATL3-204ENST00000540699 CEP72Q9P209 647 aa11.39□□□□□ -0.59
ATL3-204ENST00000540699 PUF60Q9UHX1 559 aaKnown RBP11.39□□□□□ -0.59
ATL3-204ENST00000540699 FBXL5Q9UKA1 691 aa11.39□□□□□ -0.59
ATL3-204ENST00000540699 IRAK3Q9Y616 596 aa11.39□□□□□ -0.59
ATL3-204ENST00000540699 SF3B1O75533 1304 aaKnown RBP eCLIP11.38□□□□□ -0.594e-7■■■■■ 86.2
ATL3-204ENST00000540699 PIRO00625 290 aa11.38□□□□□ -0.59
ATL3-204ENST00000540699 ARHGAP6O43182 974 aa11.38□□□□□ -0.59
ATL3-204ENST00000540699 NRDCO43847 1150 aa11.38□□□□□ -0.59
ATL3-204ENST00000540699 GPR37L1O60883 481 aa11.38□□□□□ -0.59
ATL3-204ENST00000540699 LILRB3O75022 631 aa11.38□□□□□ -0.59
ATL3-204ENST00000540699 SOD2P04179 222 aa11.38□□□□□ -0.59
ATL3-204ENST00000540699 CTSAP10619 480 aa11.38□□□□□ -0.59
ATL3-204ENST00000540699 PAX3P23760 479 aa11.38□□□□□ -0.59
ATL3-204ENST00000540699 IGFBP6P24592 240 aaPredicted RBP11.38□□□□□ -0.59
ATL3-204ENST00000540699 GTF2H1P32780 548 aa11.38□□□□□ -0.59
ATL3-204ENST00000540699 IRS1P35568 1242 aa11.38□□□□□ -0.59
ATL3-204ENST00000540699 MXI1P50539 228 aa11.38□□□□□ -0.59
ATL3-204ENST00000540699 GUCY2FP51841 1108 aa11.38□□□□□ -0.59
ATL3-204ENST00000540699 ERVFC1P60507 584 aa11.38□□□□□ -0.59
ATL3-204ENST00000540699 APBA1Q02410 837 aa11.38□□□□□ -0.59
ATL3-204ENST00000540699 ELAVL2Q12926 359 aaKnown RBP11.38□□□□□ -0.59
ATL3-204ENST00000540699 C9orf57Q5W0N0 161 aa11.38□□□□□ -0.59
ATL3-204ENST00000540699 E4F1Q66K89 784 aaPredicted RBP11.38□□□□□ -0.59
ATL3-204ENST00000540699 FUT10Q6P4F1 479 aa11.38□□□□□ -0.59
ATL3-204ENST00000540699 PDXDC1Q6P996 788 aa11.38□□□□□ -0.59
ATL3-204ENST00000540699 C15orf39Q6ZRI6 1047 aa11.38□□□□□ -0.59
ATL3-204ENST00000540699 TMEM130Q8N3G9 435 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms