RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 EXOC7Q9UPT5 735 aa14.2□□□□□ -0.14
SEMA4D-223ENST00000540475 SIT1Q9Y3P8 196 aa14.2□□□□□ -0.14
SEMA4D-223ENST00000540475 IL18RAPO95256 599 aa14.19□□□□□ -0.14
SEMA4D-223ENST00000540475 YEATS4O95619 227 aa14.19□□□□□ -0.14
SEMA4D-223ENST00000540475 LDHAP00338 332 aaKnown RBP14.19□□□□□ -0.14
SEMA4D-223ENST00000540475 ODC1P11926 461 aa14.19□□□□□ -0.14
SEMA4D-223ENST00000540475 CPB1P15086 417 aa14.19□□□□□ -0.14
SEMA4D-223ENST00000540475 STAT6P42226 847 aa14.19□□□□□ -0.14
SEMA4D-223ENST00000540475 CASP5P51878 434 aa14.19□□□□□ -0.14
SEMA4D-223ENST00000540475 DUSP4Q13115 394 aa14.19□□□□□ -0.14
SEMA4D-223ENST00000540475 PLD1Q13393 1074 aa14.19□□□□□ -0.14
SEMA4D-223ENST00000540475 ANGPT1Q15389 498 aa14.19□□□□□ -0.14
SEMA4D-223ENST00000540475 SLC44A4Q53GD3 710 aa14.19□□□□□ -0.14
SEMA4D-223ENST00000540475 CYP4A22Q5TCH4 519 aa14.19□□□□□ -0.14
SEMA4D-223ENST00000540475 IQCEQ6IPM2 695 aa14.19□□□□□ -0.14
SEMA4D-223ENST00000540475 PDZD4Q76G19 769 aaPredicted RBP14.19□□□□□ -0.14
SEMA4D-223ENST00000540475 TMC8Q8IU68 726 aa14.19□□□□□ -0.14
SEMA4D-223ENST00000540475 EFCAB13Q8IY85 973 aa14.19□□□□□ -0.14
SEMA4D-223ENST00000540475 ELMOD1Q8N336 334 aa14.19□□□□□ -0.14
SEMA4D-223ENST00000540475 ST13P5Q8NFI4 369 aaPredicted RBP14.19□□□□□ -0.14
SEMA4D-223ENST00000540475 PJA1Q8NG27 643 aa14.19□□□□□ -0.14
SEMA4D-223ENST00000540475 CXorf38Q8TB03 319 aa14.19□□□□□ -0.14
SEMA4D-223ENST00000540475 ING5Q8WYH8 240 aa14.19□□□□□ -0.14
SEMA4D-223ENST00000540475 POMGNT1Q8WZA1 660 aa14.19□□□□□ -0.14
SEMA4D-223ENST00000540475 FAM212AQ96EL1 285 aa14.19□□□□□ -0.14
SEMA4D-223ENST00000540475 ASB16Q96NS5 453 aa14.19□□□□□ -0.14
SEMA4D-223ENST00000540475 KXD1Q9BQD3 176 aa14.19□□□□□ -0.14
SEMA4D-223ENST00000540475 GPR88Q9GZN0 384 aa14.19□□□□□ -0.14
SEMA4D-223ENST00000540475 DNAJC25Q9H1X3 360 aa14.19□□□□□ -0.14
SEMA4D-223ENST00000540475 TNMDQ9H2S6 317 aa14.19□□□□□ -0.14
SEMA4D-223ENST00000540475 CUEDC2Q9H467 287 aa14.19□□□□□ -0.14
SEMA4D-223ENST00000540475 TRPV5Q9NQA5 729 aa14.19□□□□□ -0.14
SEMA4D-223ENST00000540475 DPP3Q9NY33 737 aa14.19□□□□□ -0.14
SEMA4D-223ENST00000540475 DSEQ9UL01 958 aa14.19□□□□□ -0.14
SEMA4D-223ENST00000540475 ASB3Q9Y575 518 aa14.19□□□□□ -0.14
SEMA4D-223ENST00000540475 COL4A3Q01955 1670 aa14.19□□□□□ -0.14
SEMA4D-223ENST00000540475 TICRRQ7Z2Z1 1910 aa14.18□□□□□ -0.14
SEMA4D-223ENST00000540475 KANSL1LA0AUZ9 987 aa14.18□□□□□ -0.14
SEMA4D-223ENST00000540475 MTMR11A4FU01 709 aa14.18□□□□□ -0.14
SEMA4D-223ENST00000540475 SHISA7A6NL88 538 aa14.18□□□□□ -0.14
SEMA4D-223ENST00000540475 SPTLC2O15270 562 aa14.18□□□□□ -0.14
SEMA4D-223ENST00000540475 OR4Q2P0C623 313 aa14.18□□□□□ -0.14
SEMA4D-223ENST00000540475 GLULP15104 373 aa14.18□□□□□ -0.14
SEMA4D-223ENST00000540475 MLF2Q15773 248 aaPredicted RBP14.18□□□□□ -0.14
SEMA4D-223ENST00000540475 FAM78AQ5JUQ0 283 aa14.18□□□□□ -0.14
SEMA4D-223ENST00000540475 BRSK2Q8IWQ3 736 aa14.18□□□□□ -0.14
SEMA4D-223ENST00000540475 HS6ST3Q8IZP7 471 aa14.18□□□□□ -0.14
SEMA4D-223ENST00000540475 DNASE1L2Q92874 299 aa14.18□□□□□ -0.14
SEMA4D-223ENST00000540475 ZSWIM3Q96MP5 696 aa14.18□□□□□ -0.14
SEMA4D-223ENST00000540475 FGFBP2Q9BYJ0 223 aa14.18□□□□□ -0.14
SEMA4D-223ENST00000540475 PANK2Q9BZ23 570 aa14.18□□□□□ -0.14
SEMA4D-223ENST00000540475 ZCWPW1Q9H0M4 648 aa14.18□□□□□ -0.14
SEMA4D-223ENST00000540475 TMEM206Q9H813 350 aa14.18□□□□□ -0.14
SEMA4D-223ENST00000540475 PANK4Q9NVE7 773 aa14.18□□□□□ -0.14
SEMA4D-223ENST00000540475 YIPF1Q9Y548 306 aa14.18□□□□□ -0.14
SEMA4D-223ENST00000540475 ZNF292O60281 2723 aa14.18□□□□□ -0.14
SEMA4D-223ENST00000540475 OBSL1O75147 1896 aa14.17□□□□□ -0.14
SEMA4D-223ENST00000540475 KIAA0391O15091 583 aaKnown RBP14.17□□□□□ -0.14
SEMA4D-223ENST00000540475 GFRA3O60609 400 aa14.17□□□□□ -0.14
SEMA4D-223ENST00000540475 GCNT3O95395 438 aa14.17□□□□□ -0.14
SEMA4D-223ENST00000540475 TAF6P49848 677 aa14.17□□□□□ -0.14
SEMA4D-223ENST00000540475 WNT7BP56706 349 aa14.17□□□□□ -0.14
SEMA4D-223ENST00000540475 SMARCB1Q12824 385 aa14.17□□□□□ -0.14
SEMA4D-223ENST00000540475 SNW1Q13573 536 aaKnown RBP14.17□□□□□ -0.14
SEMA4D-223ENST00000540475 STK38Q15208 465 aa14.17□□□□□ -0.14
SEMA4D-223ENST00000540475 ZNF687Q8N1G0 1237 aa14.17□□□□□ -0.14
SEMA4D-223ENST00000540475 ZSWIM2Q8NEG5 633 aa14.17□□□□□ -0.14
SEMA4D-223ENST00000540475 OR10T2Q8NGX3 314 aa14.17□□□□□ -0.14
SEMA4D-223ENST00000540475 C2orf15Q8WU43 125 aaKnown RBP14.17□□□□□ -0.14
SEMA4D-223ENST00000540475 SMARCD2Q92925 531 aa14.17□□□□□ -0.14
SEMA4D-223ENST00000540475 CLDN23Q96B33 292 aa14.17□□□□□ -0.14
SEMA4D-223ENST00000540475 ZNF396Q96N95 335 aaPredicted RBP14.17□□□□□ -0.14
SEMA4D-223ENST00000540475 TMEM209Q96SK2 561 aa14.17□□□□□ -0.14
SEMA4D-223ENST00000540475 NELL2Q99435 816 aa14.17□□□□□ -0.14
SEMA4D-223ENST00000540475 LRRC27Q9C0I9 530 aa14.17□□□□□ -0.14
SEMA4D-223ENST00000540475 ZFP14Q9HCL3 533 aa14.17□□□□□ -0.14
SEMA4D-223ENST00000540475 ASAH2Q9NR71 780 aa14.17□□□□□ -0.14
SEMA4D-223ENST00000540475 FOXD4L1Q9NU39 408 aa14.17□□□□□ -0.14
SEMA4D-223ENST00000540475 TBC1D7Q9P0N9 293 aa14.17□□□□□ -0.14
SEMA4D-223ENST00000540475 TFIP11Q9UBB9 837 aaKnown RBP14.17□□□□□ -0.14
SEMA4D-223ENST00000540475 RIF1Q5UIP0 2472 aaKnown RBP14.17□□□□□ -0.14
SEMA4D-223ENST00000540475 KIF26AQ9ULI4 1882 aaPredicted RBP14.16□□□□□ -0.14
SEMA4D-223ENST00000540475 DCHS1Q96JQ0 3298 aa14.16□□□□□ -0.14
SEMA4D-223ENST00000540475 FAM186AA6NE01 2351 aa14.16□□□□□ -0.14
SEMA4D-223ENST00000540475 PRR23AA6NEV1 266 aa14.16□□□□□ -0.14
SEMA4D-223ENST00000540475 KPNA7A9QM74 516 aa14.16□□□□□ -0.14
SEMA4D-223ENST00000540475 STK25O00506 426 aa14.16□□□□□ -0.14
SEMA4D-223ENST00000540475 CYB561D2O14569 222 aa14.16□□□□□ -0.14
SEMA4D-223ENST00000540475 EXTL3O43909 919 aa14.16□□□□□ -0.14
SEMA4D-223ENST00000540475 CUTAO60888 179 aa14.16□□□□□ -0.14
SEMA4D-223ENST00000540475 DCNP07585 359 aaKnown RBP14.16□□□□□ -0.14
SEMA4D-223ENST00000540475 WEE1P30291 646 aa14.16□□□□□ -0.14
SEMA4D-223ENST00000540475 HOXD13P35453 343 aa14.16□□□□□ -0.14
SEMA4D-223ENST00000540475 PNPLA4P41247 253 aa14.16□□□□□ -0.14
SEMA4D-223ENST00000540475 MAGEA9P43362 315 aa14.16□□□□□ -0.14
SEMA4D-223ENST00000540475 EPHB3P54753 998 aa14.16□□□□□ -0.14
SEMA4D-223ENST00000540475 MLLT6P55198 1093 aaPredicted RBP14.16□□□□□ -0.14
SEMA4D-223ENST00000540475 EHHADHQ08426 723 aa14.16□□□□□ -0.14
SEMA4D-223ENST00000540475 FZD5Q13467 585 aa14.16□□□□□ -0.14
SEMA4D-223ENST00000540475 ATL3Q6DD88 541 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms