RNA–Protein interactions for RNA: ENST00000540445.5

LMO3-222, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-222ENST00000540445 CASP5P51878 434 aa9.75□□□□□ -0.85
LMO3-222ENST00000540445 GPC5P78333 572 aa9.75□□□□□ -0.85
LMO3-222ENST00000540445 DUSP4Q13115 394 aa9.75□□□□□ -0.85
LMO3-222ENST00000540445 ALCAMQ13740 583 aa9.75□□□□□ -0.85
LMO3-222ENST00000540445 POTEHQ6S545 545 aa9.75□□□□□ -0.85
LMO3-222ENST00000540445 CRELD2Q6UXH1 353 aaPredicted RBP9.75□□□□□ -0.85
LMO3-222ENST00000540445 PDZD4Q76G19 769 aaPredicted RBP9.75□□□□□ -0.85
LMO3-222ENST00000540445 CCDC105Q8IYK2 499 aa9.75□□□□□ -0.85
LMO3-222ENST00000540445 THEM5Q8N1Q8 247 aa9.75□□□□□ -0.85
LMO3-222ENST00000540445 IQUBQ8NA54 791 aa9.75□□□□□ -0.85
LMO3-222ENST00000540445 CACTINQ8WUQ7 758 aaKnown RBP9.75□□□□□ -0.85
LMO3-222ENST00000540445 KXD1Q9BQD3 176 aa9.75□□□□□ -0.85
LMO3-222ENST00000540445 PYM1Q9BRP8 204 aaKnown RBP9.75□□□□□ -0.85
LMO3-222ENST00000540445 STRA6Q9BX79 667 aa9.75□□□□□ -0.85
LMO3-222ENST00000540445 TNMDQ9H2S6 317 aa9.75□□□□□ -0.85
LMO3-222ENST00000540445 CUEDC2Q9H467 287 aa9.75□□□□□ -0.85
LMO3-222ENST00000540445 PCIF1Q9H4Z3 704 aa9.75□□□□□ -0.85
LMO3-222ENST00000540445 SLC2A4RGQ9NR83 387 aa9.75□□□□□ -0.85
LMO3-222ENST00000540445 OLFML3Q9NRN5 406 aa9.75□□□□□ -0.85
LMO3-222ENST00000540445 FAM13BQ9NYF5 915 aa9.75□□□□□ -0.85
LMO3-222ENST00000540445 GDE1Q9NZC3 331 aa9.75□□□□□ -0.85
LMO3-222ENST00000540445 CFAP45Q9UL16 551 aa9.75□□□□□ -0.85
LMO3-222ENST00000540445 SLC27A5Q9Y2P5 690 aa9.75□□□□□ -0.85
LMO3-222ENST00000540445 R3HCC1Q9Y3T6 440 aaKnown RBP9.75□□□□□ -0.85
LMO3-222ENST00000540445 C2CD2Q9Y426 696 aa9.75□□□□□ -0.85
LMO3-222ENST00000540445 TICRRQ7Z2Z1 1910 aa9.75□□□□□ -0.85
LMO3-222ENST00000540445 FAM186AA6NE01 2351 aa9.75□□□□□ -0.85
LMO3-222ENST00000540445 KIF26AQ9ULI4 1882 aaPredicted RBP9.74□□□□□ -0.85
LMO3-222ENST00000540445 WDR87Q6ZQQ6 2873 aa9.74□□□□□ -0.85
LMO3-222ENST00000540445 MYH10P35580 1976 aa9.74□□□□□ -0.85
LMO3-222ENST00000540445 FRYLO94915 3013 aa9.74□□□□□ -0.85
LMO3-222ENST00000540445 ANO9A1A5B4 782 aa9.74□□□□□ -0.85
LMO3-222ENST00000540445 GOLGA8IPA6NC78 632 aa9.74□□□□□ -0.85
LMO3-222ENST00000540445 OR6C75A6NL08 312 aa9.74□□□□□ -0.85
LMO3-222ENST00000540445 GOLGA8JA6NMD2 632 aa9.74□□□□□ -0.85
LMO3-222ENST00000540445 POLR2DO15514 142 aaKnown RBP9.74□□□□□ -0.85
LMO3-222ENST00000540445 MYL4P12829 197 aa9.74□□□□□ -0.85
LMO3-222ENST00000540445 TYMPP19971 482 aa9.74□□□□□ -0.85
LMO3-222ENST00000540445 GARTP22102 1010 aa9.74□□□□□ -0.85
LMO3-222ENST00000540445 NBL1P41271 181 aa9.74□□□□□ -0.85
LMO3-222ENST00000540445 AARSP49588 968 aaKnown RBP eCLIP9.74□□□□□ -0.85
LMO3-222ENST00000540445 TAF6P49848 677 aa9.74□□□□□ -0.85
LMO3-222ENST00000540445 CDR1P51861 262 aa9.74□□□□□ -0.85
LMO3-222ENST00000540445 EPHB3P54753 998 aa9.74□□□□□ -0.85
LMO3-222ENST00000540445 ASIC1P78348 528 aa9.74□□□□□ -0.85
LMO3-222ENST00000540445 TFAMQ00059 246 aaKnown RBP9.74□□□□□ -0.85
LMO3-222ENST00000540445 POU5F1Q01860 360 aaKnown RBP9.74□□□□□ -0.85
LMO3-222ENST00000540445 GPR17Q13304 367 aa9.74□□□□□ -0.85
LMO3-222ENST00000540445 SNW1Q13573 536 aaKnown RBP9.74□□□□□ -0.85
LMO3-222ENST00000540445 SLC5A9Q2M3M2 681 aa9.74□□□□□ -0.85
LMO3-222ENST00000540445 PHLDB3Q6NSJ2 640 aa9.74□□□□□ -0.85
LMO3-222ENST00000540445 NT5DC4Q86YG4 428 aa9.74□□□□□ -0.85
LMO3-222ENST00000540445 NPAS3Q8IXF0 933 aa9.74□□□□□ -0.85
LMO3-222ENST00000540445 HS6ST3Q8IZP7 471 aa9.74□□□□□ -0.85
LMO3-222ENST00000540445 FAM200AQ8TCP9 573 aa9.74□□□□□ -0.85
LMO3-222ENST00000540445 KCNG4Q8TDN1 519 aa9.74□□□□□ -0.85
LMO3-222ENST00000540445 HPS3Q969F9 1004 aa9.74□□□□□ -0.85
LMO3-222ENST00000540445 SHDQ96IW2 340 aa9.74□□□□□ -0.85
LMO3-222ENST00000540445 AVENQ9NQS1 362 aaPredicted RBP9.74□□□□□ -0.85
LMO3-222ENST00000540445 RBAKQ9NYW8 714 aaPredicted RBP9.74□□□□□ -0.85
LMO3-222ENST00000540445 CEP72Q9P209 647 aa9.74□□□□□ -0.85
LMO3-222ENST00000540445 DSEQ9UL01 958 aa9.74□□□□□ -0.85
LMO3-222ENST00000540445 ZFHX2Q9C0A1 2572 aaPredicted RBP9.74□□□□□ -0.85
LMO3-222ENST00000540445 OBSL1O75147 1896 aa9.74□□□□□ -0.85
LMO3-222ENST00000540445 RIF1Q5UIP0 2472 aaKnown RBP9.73□□□□□ -0.85
LMO3-222ENST00000540445 FRMD3A2A2Y4 597 aa9.73□□□□□ -0.85
LMO3-222ENST00000540445 KPNA7A9QM74 516 aa9.73□□□□□ -0.85
LMO3-222ENST00000540445 SPTLC1O15269 473 aa9.73□□□□□ -0.85
LMO3-222ENST00000540445 EXTL3O43909 919 aa9.73□□□□□ -0.85
LMO3-222ENST00000540445 KRT19P08727 400 aa9.73□□□□□ -0.85
LMO3-222ENST00000540445 CEBPBP17676 345 aa9.73□□□□□ -0.85
LMO3-222ENST00000540445 AFMP43652 599 aa9.73□□□□□ -0.85
LMO3-222ENST00000540445 PFKPQ01813 784 aa9.73□□□□□ -0.85
LMO3-222ENST00000540445 PLD1Q13393 1074 aa9.73□□□□□ -0.85
LMO3-222ENST00000540445 MYBPC2Q14324 1141 aa9.73□□□□□ -0.85
LMO3-222ENST00000540445 SV2CQ496J9 727 aa9.73□□□□□ -0.85
LMO3-222ENST00000540445 SLC39A12Q504Y0 691 aa9.73□□□□□ -0.85
LMO3-222ENST00000540445 SLC44A4Q53GD3 710 aa9.73□□□□□ -0.85
LMO3-222ENST00000540445 ATL3Q6DD88 541 aa9.73□□□□□ -0.85
LMO3-222ENST00000540445 SHC4Q6S5L8 630 aa9.73□□□□□ -0.85
LMO3-222ENST00000540445 CSGALNACT2Q8N6G5 542 aa9.73□□□□□ -0.85
LMO3-222ENST00000540445 DTWD2Q8NBA8 298 aa9.73□□□□□ -0.85
LMO3-222ENST00000540445 ATAD1Q8NBU5 361 aa9.73□□□□□ -0.85
LMO3-222ENST00000540445 ZSWIM2Q8NEG5 633 aa9.73□□□□□ -0.85
LMO3-222ENST00000540445 TCEAL4Q96EI5 215 aa9.73□□□□□ -0.85
LMO3-222ENST00000540445 TMEM209Q96SK2 561 aa9.73□□□□□ -0.85
LMO3-222ENST00000540445 CBWD1Q9BRT8 395 aa9.73□□□□□ -0.85
LMO3-222ENST00000540445 FGFBP2Q9BYJ0 223 aa9.73□□□□□ -0.85
LMO3-222ENST00000540445 TRIM9Q9C026 710 aa9.73□□□□□ -0.85
LMO3-222ENST00000540445 TBC1D17Q9HA65 648 aa9.73□□□□□ -0.85
LMO3-222ENST00000540445 ZFP14Q9HCL3 533 aa9.73□□□□□ -0.85
LMO3-222ENST00000540445 ASAH2Q9NR71 780 aa9.73□□□□□ -0.85
LMO3-222ENST00000540445 ARHGEF3Q9NR81 526 aa9.73□□□□□ -0.85
LMO3-222ENST00000540445 KBTBD4Q9NVX7 518 aa9.73□□□□□ -0.85
LMO3-222ENST00000540445 DLGAP2Q9P1A6 1054 aa9.73□□□□□ -0.85
LMO3-222ENST00000540445 PCDHA7Q9UN72 937 aa9.73□□□□□ -0.85
LMO3-222ENST00000540445 AGAP1Q9UPQ3 857 aa9.73□□□□□ -0.85
LMO3-222ENST00000540445 SIT1Q9Y3P8 196 aa9.73□□□□□ -0.85
LMO3-222ENST00000540445 ZNF233A6NK53 670 aa9.72□□□□□ -0.85
LMO3-222ENST00000540445 NRG2O14511 850 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms