RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 HNRNPA1P09651 372 aaKnown RBP eCLIP16.25■□□□□ 0.19
UBE3B-212ENST00000540230 TMEM191BP0C7N4 346 aa16.25■□□□□ 0.19
UBE3B-212ENST00000540230 SNRPFP62306 86 aaKnown RBP16.25■□□□□ 0.19
UBE3B-212ENST00000540230 CYP24A1Q07973 514 aa16.25■□□□□ 0.19
UBE3B-212ENST00000540230 ADCY1Q08828 1119 aa16.25■□□□□ 0.19
UBE3B-212ENST00000540230 WSCD1Q658N2 575 aa16.25■□□□□ 0.19
UBE3B-212ENST00000540230 CACTINQ8WUQ7 758 aaKnown RBP16.25■□□□□ 0.19
UBE3B-212ENST00000540230 PGLYRP2Q96PD5 576 aa16.25■□□□□ 0.19
UBE3B-212ENST00000540230 SMOC2Q9H3U7 446 aa16.25■□□□□ 0.19
UBE3B-212ENST00000540230 CYP4F11Q9HBI6 524 aa16.25■□□□□ 0.19
UBE3B-212ENST00000540230 KIAA1586Q9HCI6 787 aa16.25■□□□□ 0.19
UBE3B-212ENST00000540230 KRT19P08727 400 aa16.24■□□□□ 0.19
UBE3B-212ENST00000540230 DLATP10515 647 aaKnown RBP16.24■□□□□ 0.19
UBE3B-212ENST00000540230 ALADP13716 330 aa16.24■□□□□ 0.19
UBE3B-212ENST00000540230 CASP4P49662 377 aa16.24■□□□□ 0.19
UBE3B-212ENST00000540230 FAM160A1Q05DH4 1040 aa16.24■□□□□ 0.19
UBE3B-212ENST00000540230 KCNB1Q14721 858 aa16.24■□□□□ 0.19
UBE3B-212ENST00000540230 PSMD6Q15008 389 aa16.24■□□□□ 0.19
UBE3B-212ENST00000540230 UVSSAQ2YD98 709 aa16.24■□□□□ 0.19
UBE3B-212ENST00000540230 SV2CQ496J9 727 aa16.24■□□□□ 0.19
UBE3B-212ENST00000540230 TPGS2Q68CL5 300 aa16.24■□□□□ 0.19
UBE3B-212ENST00000540230 GET4Q7L5D6 327 aaPredicted RBP16.24■□□□□ 0.19
UBE3B-212ENST00000540230 WDR49Q8IV35 697 aa16.24■□□□□ 0.19
UBE3B-212ENST00000540230 SMYD4Q8IYR2 804 aaPredicted RBP16.24■□□□□ 0.19
UBE3B-212ENST00000540230 ZDHHC14Q8IZN3 488 aa16.24■□□□□ 0.19
UBE3B-212ENST00000540230 CCDC127Q96BQ5 260 aa16.24■□□□□ 0.19
UBE3B-212ENST00000540230 ANKRD36BP1Q96IX9 119 aa16.24■□□□□ 0.19
UBE3B-212ENST00000540230 ZNF560Q96MR9 790 aa16.24■□□□□ 0.19
UBE3B-212ENST00000540230 DMAC2Q9NW81 257 aa16.24■□□□□ 0.19
UBE3B-212ENST00000540230 CGNQ9P2M7 1197 aaKnown RBP16.24■□□□□ 0.19
UBE3B-212ENST00000540230 DNMT3BQ9UBC3 853 aaKnown RBP16.24■□□□□ 0.19
UBE3B-212ENST00000540230 LIMD1Q9UGP4 676 aa16.24■□□□□ 0.19
UBE3B-212ENST00000540230 AFF4Q9UHB7 1163 aaKnown RBP16.24■□□□□ 0.19
UBE3B-212ENST00000540230 ITGA11Q9UKX5 1188 aa16.24■□□□□ 0.19
UBE3B-212ENST00000540230 ARHGEF37A1IGU5 675 aa16.24■□□□□ 0.19
UBE3B-212ENST00000540230 EXOC3O60645 756 aa16.24■□□□□ 0.19
UBE3B-212ENST00000540230 PAX3P23760 479 aa16.24■□□□□ 0.19
UBE3B-212ENST00000540230 BFSP1Q12934 665 aa16.24■□□□□ 0.19
UBE3B-212ENST00000540230 SURF1Q15526 300 aa16.24■□□□□ 0.19
UBE3B-212ENST00000540230 PTPN21Q16825 1174 aa16.24■□□□□ 0.19
UBE3B-212ENST00000540230 TCEAL8Q8IYN2 117 aa16.24■□□□□ 0.19
UBE3B-212ENST00000540230 TTC9BQ8N6N2 239 aa16.24■□□□□ 0.19
UBE3B-212ENST00000540230 LRRC52Q8N7C0 313 aa16.24■□□□□ 0.19
UBE3B-212ENST00000540230 ST13P5Q8NFI4 369 aaPredicted RBP16.24■□□□□ 0.19
UBE3B-212ENST00000540230 ZNF516Q92618 1163 aa16.24■□□□□ 0.19
UBE3B-212ENST00000540230 MFSD14AQ96MC6 490 aa16.24■□□□□ 0.19
UBE3B-212ENST00000540230 CGRRF1Q99675 332 aa16.24■□□□□ 0.19
UBE3B-212ENST00000540230 L1RE1Q9UN81 338 aa16.24■□□□□ 0.19
UBE3B-212ENST00000540230 INSL5Q9Y5Q6 135 aa16.24■□□□□ 0.19
UBE3B-212ENST00000540230 MTMR11A4FU01 709 aa16.23■□□□□ 0.19
UBE3B-212ENST00000540230 OR6C75A6NL08 312 aa16.23■□□□□ 0.19
UBE3B-212ENST00000540230 PDXKO00764 312 aa16.23■□□□□ 0.19
UBE3B-212ENST00000540230 NRG2O14511 850 aaPredicted RBP16.23■□□□□ 0.19
UBE3B-212ENST00000540230 PRRG1O14668 218 aa16.23■□□□□ 0.19
UBE3B-212ENST00000540230 GBP2P32456 591 aaPredicted RBP16.23■□□□□ 0.19
UBE3B-212ENST00000540230 ELF1P32519 619 aa16.23■□□□□ 0.19
UBE3B-212ENST00000540230 OTOP3Q7RTS5 596 aa16.23■□□□□ 0.19
UBE3B-212ENST00000540230 TRAPPC11Q7Z392 1133 aa16.23■□□□□ 0.19
UBE3B-212ENST00000540230 ITFG1Q8TB96 612 aa16.23■□□□□ 0.19
UBE3B-212ENST00000540230 CCDC47Q96A33 483 aaKnown RBP16.23■□□□□ 0.19
UBE3B-212ENST00000540230 ACSF2Q96CM8 615 aaPredicted RBP16.23■□□□□ 0.19
UBE3B-212ENST00000540230 LRFN3Q9BTN0 628 aa16.23■□□□□ 0.19
UBE3B-212ENST00000540230 C1QTNF1Q9BXJ1 281 aa16.23■□□□□ 0.19
UBE3B-212ENST00000540230 HCRTO43612 131 aa16.22■□□□□ 0.19
UBE3B-212ENST00000540230 GPR37L1O60883 481 aa16.22■□□□□ 0.19
UBE3B-212ENST00000540230 XYLBO75191 536 aa16.22■□□□□ 0.19
UBE3B-212ENST00000540230 CST3P01034 146 aaPredicted RBP16.22■□□□□ 0.19
UBE3B-212ENST00000540230 TNNC2P02585 160 aa16.22■□□□□ 0.19
UBE3B-212ENST00000540230 LRG1P02750 347 aa16.22■□□□□ 0.19
UBE3B-212ENST00000540230 NR3C1P04150 777 aa16.22■□□□□ 0.19
UBE3B-212ENST00000540230 POU2F2P09086 479 aa16.22■□□□□ 0.19
UBE3B-212ENST00000540230 TNNI1P19237 187 aa16.22■□□□□ 0.19
UBE3B-212ENST00000540230 PNPLA4P41247 253 aa16.22■□□□□ 0.19
UBE3B-212ENST00000540230 RBP5P82980 135 aa16.22■□□□□ 0.19
UBE3B-212ENST00000540230 ZXDAP98168 799 aa16.22■□□□□ 0.19
UBE3B-212ENST00000540230 GPR17Q13304 367 aa16.22■□□□□ 0.19
UBE3B-212ENST00000540230 MYBPC2Q14324 1141 aa16.22■□□□□ 0.19
UBE3B-212ENST00000540230 DUOXA2Q1HG44 320 aa16.22■□□□□ 0.19
UBE3B-212ENST00000540230 SLC5A9Q2M3M2 681 aa16.22■□□□□ 0.19
UBE3B-212ENST00000540230 POTEHQ6S545 545 aa16.22■□□□□ 0.19
UBE3B-212ENST00000540230 LRRTM3Q86VH5 581 aa16.22■□□□□ 0.19
UBE3B-212ENST00000540230 OSTM1Q86WC4 334 aa16.22■□□□□ 0.19
UBE3B-212ENST00000540230 SLC9A9Q8IVB4 645 aa16.22■□□□□ 0.19
UBE3B-212ENST00000540230 PLCD3Q8N3E9 789 aa16.22■□□□□ 0.19
UBE3B-212ENST00000540230 PDCL2Q8N4E4 241 aa16.22■□□□□ 0.19
UBE3B-212ENST00000540230 ATAD1Q8NBU5 361 aa16.22■□□□□ 0.19
UBE3B-212ENST00000540230 GOLGA5Q8TBA6 731 aa16.22■□□□□ 0.19
UBE3B-212ENST00000540230 EDAQ92838 391 aa16.22■□□□□ 0.19
UBE3B-212ENST00000540230 FNBP1Q96RU3 617 aa16.22■□□□□ 0.19
UBE3B-212ENST00000540230 CHMP5Q9NZZ3 219 aa16.22■□□□□ 0.19
UBE3B-212ENST00000540230 TRAF3IP3Q9Y228 551 aa16.22■□□□□ 0.19
UBE3B-212ENST00000540230 YIPF1Q9Y548 306 aa16.22■□□□□ 0.19
UBE3B-212ENST00000540230 SNX9Q9Y5X1 595 aa16.22■□□□□ 0.19
UBE3B-212ENST00000540230 LRRIQ3A6PVS8 624 aaPredicted RBP16.21■□□□□ 0.19
UBE3B-212ENST00000540230 SOAT2O75908 522 aa16.21■□□□□ 0.19
UBE3B-212ENST00000540230 FSHRP23945 695 aa16.21■□□□□ 0.19
UBE3B-212ENST00000540230 ANP32AP39687 249 aaKnown RBP16.21■□□□□ 0.19
UBE3B-212ENST00000540230 DLG4P78352 724 aa16.21■□□□□ 0.19
UBE3B-212ENST00000540230 TWF1Q12792 350 aa16.21■□□□□ 0.19
UBE3B-212ENST00000540230 DUSP4Q13115 394 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms