RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 NFX1Q12986 1120 aaKnown RBP14.47□□□□□ -0.09
BNIP3-202ENST00000540159 LY6KQ17RY6 165 aa14.47□□□□□ -0.09
BNIP3-202ENST00000540159 TMEM63BQ5T3F8 832 aa14.47□□□□□ -0.09
BNIP3-202ENST00000540159 RHBDF2Q6PJF5 856 aa14.47□□□□□ -0.09
BNIP3-202ENST00000540159 ABRAQ8N0Z2 381 aa14.47□□□□□ -0.09
BNIP3-202ENST00000540159 NTPCRQ9BSD7 190 aaKnown RBP14.47□□□□□ -0.09
BNIP3-202ENST00000540159 TRAIPQ9BWF2 469 aa14.47□□□□□ -0.09
BNIP3-202ENST00000540159 SNX3O60493 162 aa14.46□□□□□ -0.09
BNIP3-202ENST00000540159 PECAM1P16284 738 aaPredicted RBP14.46□□□□□ -0.09
BNIP3-202ENST00000540159 RXRBP28702 533 aa14.46□□□□□ -0.09
BNIP3-202ENST00000540159 CENPCQ03188 943 aa14.46□□□□□ -0.09
BNIP3-202ENST00000540159 CLUL1Q15846 466 aa14.46□□□□□ -0.09
BNIP3-202ENST00000540159 GPAT2Q6NUI2 795 aa14.46□□□□□ -0.09
BNIP3-202ENST00000540159 SGSM3Q96HU1 749 aa14.46□□□□□ -0.09
BNIP3-202ENST00000540159 NLRP4Q96MN2 994 aa14.46□□□□□ -0.09
BNIP3-202ENST00000540159 TACO1Q9BSH4 297 aaKnown RBP14.46□□□□□ -0.09
BNIP3-202ENST00000540159 RNF19AQ9NV58 838 aa14.46□□□□□ -0.09
BNIP3-202ENST00000540159 WHRNQ9P202 907 aa14.46□□□□□ -0.09
BNIP3-202ENST00000540159 SUPT20HL2P0C7V6 817 aa14.46□□□□□ -0.09
BNIP3-202ENST00000540159 CDC25CP30307 473 aa14.46□□□□□ -0.09
BNIP3-202ENST00000540159 MAGEA4P43358 317 aa14.46□□□□□ -0.09
BNIP3-202ENST00000540159 TNFAIP1Q13829 316 aa14.46□□□□□ -0.09
BNIP3-202ENST00000540159 SUPT20HL1Q3ZLR7 823 aa14.46□□□□□ -0.09
BNIP3-202ENST00000540159 TRMT10CQ7L0Y3 403 aaKnown RBP14.46□□□□□ -0.09
BNIP3-202ENST00000540159 MORC4Q8TE76 937 aa14.46□□□□□ -0.09
BNIP3-202ENST00000540159 PRPF31Q8WWY3 499 aaKnown RBP14.46□□□□□ -0.09
BNIP3-202ENST00000540159 GPRASP2Q96D09 838 aa14.46□□□□□ -0.09
BNIP3-202ENST00000540159 MAPK13O15264 365 aa14.45□□□□□ -0.1
BNIP3-202ENST00000540159 GARTP22102 1010 aa14.45□□□□□ -0.1
BNIP3-202ENST00000540159 IGBP1P78318 339 aa14.45□□□□□ -0.1
BNIP3-202ENST00000540159 ZNF252P-AS1Q0IIN9 211 aa14.45□□□□□ -0.1
BNIP3-202ENST00000540159 PTK6Q13882 451 aa14.45□□□□□ -0.1
BNIP3-202ENST00000540159 CAPSQ13938 189 aa14.45□□□□□ -0.1
BNIP3-202ENST00000540159 XKR3Q5GH77 459 aa14.45□□□□□ -0.1
BNIP3-202ENST00000540159 FKBP1CQ5VVH2 108 aa14.45□□□□□ -0.1
BNIP3-202ENST00000540159 PIGWQ7Z7B1 504 aa14.45□□□□□ -0.1
BNIP3-202ENST00000540159 CCDC33Q8N5R6 958 aa14.45□□□□□ -0.1
BNIP3-202ENST00000540159 PPP1R13LQ8WUF5 828 aa14.45□□□□□ -0.1
BNIP3-202ENST00000540159 TFAP2BQ92481 460 aa14.45□□□□□ -0.1
BNIP3-202ENST00000540159 VTI1AQ96AJ9 217 aa14.45□□□□□ -0.1
BNIP3-202ENST00000540159 ACTR5Q9H9F9 607 aaPredicted RBP14.45□□□□□ -0.1
BNIP3-202ENST00000540159 POLIQ9UNA4 740 aa14.45□□□□□ -0.1
BNIP3-202ENST00000540159 NEU2Q9Y3R4 380 aa14.45□□□□□ -0.1
BNIP3-202ENST00000540159 CYP1A1P04798 512 aaPredicted RBP14.45□□□□□ -0.1
BNIP3-202ENST00000540159 PGK2P07205 417 aa14.45□□□□□ -0.1
BNIP3-202ENST00000540159 CD48P09326 243 aa14.45□□□□□ -0.1
BNIP3-202ENST00000540159 KLF1Q13351 362 aaPredicted RBP14.45□□□□□ -0.1
BNIP3-202ENST00000540159 PSMD6Q15008 389 aa14.45□□□□□ -0.1
BNIP3-202ENST00000540159 TAF5Q15542 800 aa14.45□□□□□ -0.1
BNIP3-202ENST00000540159 SMAD1Q15797 465 aaKnown RBP14.45□□□□□ -0.1
BNIP3-202ENST00000540159 PKN2Q16513 984 aaKnown RBP14.45□□□□□ -0.1
BNIP3-202ENST00000540159 DNAJC24Q6P3W2 148 aa14.45□□□□□ -0.1
BNIP3-202ENST00000540159 C15orf39Q6ZRI6 1047 aa14.45□□□□□ -0.1
BNIP3-202ENST00000540159 NCAPG2Q86XI2 1143 aa14.45□□□□□ -0.1
BNIP3-202ENST00000540159 TMEM192Q8IY95 271 aa14.45□□□□□ -0.1
BNIP3-202ENST00000540159 C12orf50Q8NA57 414 aaPredicted RBP14.45□□□□□ -0.1
BNIP3-202ENST00000540159 IMPG2Q9BZV3 1241 aa14.45□□□□□ -0.1
BNIP3-202ENST00000540159 ECT2Q9H8V3 914 aa14.45□□□□□ -0.1
BNIP3-202ENST00000540159 AGTPBP1Q9UPW5 1226 aa14.45□□□□□ -0.1
BNIP3-202ENST00000540159 COL2A1P02458 1487 aaPredicted RBP14.45□□□□□ -0.1
BNIP3-202ENST00000540159 B4GALT5O43286 388 aa14.45□□□□□ -0.1
BNIP3-202ENST00000540159 ITGBL1O95965 494 aaPredicted RBP14.45□□□□□ -0.1
BNIP3-202ENST00000540159 OATP04181 439 aa14.45□□□□□ -0.1
BNIP3-202ENST00000540159 FOXN2P32314 431 aa14.45□□□□□ -0.1
BNIP3-202ENST00000540159 ELF3P78545 371 aaPredicted RBP14.45□□□□□ -0.1
BNIP3-202ENST00000540159 GNPTABQ3T906 1256 aa14.45□□□□□ -0.1
BNIP3-202ENST00000540159 ACCSLQ4AC99 568 aa14.45□□□□□ -0.1
BNIP3-202ENST00000540159 RNF149Q8NC42 400 aa14.45□□□□□ -0.1
BNIP3-202ENST00000540159 FEZF2Q8TBJ5 459 aa14.45□□□□□ -0.1
BNIP3-202ENST00000540159 TEX13BQ9BXU2 312 aa14.45□□□□□ -0.1
BNIP3-202ENST00000540159 STMN4Q9H169 189 aaPredicted RBP14.45□□□□□ -0.1
BNIP3-202ENST00000540159 ACAD9Q9H845 621 aa14.45□□□□□ -0.1
BNIP3-202ENST00000540159 PDLIM7Q9NR12 457 aa14.45□□□□□ -0.1
BNIP3-202ENST00000540159 NKIRAS1Q9NYS0 192 aa14.45□□□□□ -0.1
BNIP3-202ENST00000540159 A0A1W2PPM1 405 aa14.44□□□□□ -0.1
BNIP3-202ENST00000540159 GRAP2O75791 330 aa14.44□□□□□ -0.1
BNIP3-202ENST00000540159 GDF10P55107 478 aa14.44□□□□□ -0.1
BNIP3-202ENST00000540159 RNASELQ05823 741 aaKnown RBP14.44□□□□□ -0.1
BNIP3-202ENST00000540159 FITM2Q8N6M3 262 aa14.44□□□□□ -0.1
BNIP3-202ENST00000540159 GRK7Q8WTQ7 553 aa14.44□□□□□ -0.1
BNIP3-202ENST00000540159 TIPINQ9BVW5 301 aa14.44□□□□□ -0.1
BNIP3-202ENST00000540159 NSRP1Q9H0G5 558 aaKnown RBP14.44□□□□□ -0.1
BNIP3-202ENST00000540159 USP15Q9Y4E8 981 aaPredicted RBP14.44□□□□□ -0.1
BNIP3-202ENST00000540159 AFG3L2Q9Y4W6 797 aa14.44□□□□□ -0.1
BNIP3-202ENST00000540159 ATXN2Q99700 1313 aaKnown RBP14.44□□□□□ -0.1
BNIP3-202ENST00000540159 IGF2BP3O00425 579 aaKnown RBP eCLIP14.44□□□□□ -0.1
BNIP3-202ENST00000540159 POTEJP0CG39 1038 aa14.44□□□□□ -0.1
BNIP3-202ENST00000540159 SSTR1P30872 391 aa14.44□□□□□ -0.1
BNIP3-202ENST00000540159 PDIA2Q13087 525 aaKnown RBP14.44□□□□□ -0.1
BNIP3-202ENST00000540159 RAB6CQ53S08 254 aa14.44□□□□□ -0.1
BNIP3-202ENST00000540159 TREML2Q5T2D2 321 aa14.44□□□□□ -0.1
BNIP3-202ENST00000540159 RHPN2Q8IUC4 686 aa14.44□□□□□ -0.1
BNIP3-202ENST00000540159 SCYL3Q8IZE3 742 aa14.44□□□□□ -0.1
BNIP3-202ENST00000540159 CCDC89Q8N998 374 aa14.44□□□□□ -0.1
BNIP3-202ENST00000540159 ZBED3Q96IU2 234 aaPredicted RBP14.44□□□□□ -0.1
BNIP3-202ENST00000540159 TMEM237Q96Q45 408 aa14.44□□□□□ -0.1
BNIP3-202ENST00000540159 SENP7Q9BQF6 1050 aa14.44□□□□□ -0.1
BNIP3-202ENST00000540159 RAB6CQ9H0N0 254 aa14.44□□□□□ -0.1
BNIP3-202ENST00000540159 CISHQ9NSE2 258 aa14.44□□□□□ -0.1
BNIP3-202ENST00000540159 INO80B-WBP1J3KQ70 363 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms