RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 HASPINQ8TF76 798 aa20.28■□□□□ 0.84
TNFRSF1A-213ENST00000540022 IQCDQ96DY2 449 aa20.28■□□□□ 0.84
TNFRSF1A-213ENST00000540022 RAD9AQ99638 391 aa20.28■□□□□ 0.84
TNFRSF1A-213ENST00000540022 TMEM175Q9BSA9 504 aa20.28■□□□□ 0.84
TNFRSF1A-213ENST00000540022 NKX2-4Q9H2Z4 354 aa20.28■□□□□ 0.84
TNFRSF1A-213ENST00000540022 GDAP2Q9NXN4 497 aa20.28■□□□□ 0.84
TNFRSF1A-213ENST00000540022 IMPACTQ9P2X3 320 aa20.28■□□□□ 0.84
TNFRSF1A-213ENST00000540022 INSL6Q9Y581 213 aa20.28■□□□□ 0.84
TNFRSF1A-213ENST00000540022 BRCC3P46736 316 aa20.27■□□□□ 0.84
TNFRSF1A-213ENST00000540022 AARSP49588 968 aaKnown RBP eCLIP20.27■□□□□ 0.84
TNFRSF1A-213ENST00000540022 MFAP3P55082 362 aa20.27■□□□□ 0.84
TNFRSF1A-213ENST00000540022 BCAR1P56945 870 aa20.27■□□□□ 0.84
TNFRSF1A-213ENST00000540022 TNNC1P63316 161 aa20.27■□□□□ 0.84
TNFRSF1A-213ENST00000540022 FAXDC2Q96IV6 333 aa20.27■□□□□ 0.84
TNFRSF1A-213ENST00000540022 STK33Q9BYT3 514 aa20.27■□□□□ 0.84
TNFRSF1A-213ENST00000540022 BCO2Q9BYV7 579 aa20.27■□□□□ 0.84
TNFRSF1A-213ENST00000540022 SDCBP2Q9H190 292 aa20.27■□□□□ 0.84
TNFRSF1A-213ENST00000540022 SMYD3Q9H7B4 428 aa20.27■□□□□ 0.84
TNFRSF1A-213ENST00000540022 MARCH5Q9NX47 278 aa20.27■□□□□ 0.84
TNFRSF1A-213ENST00000540022 FAN1Q9Y2M0 1017 aa20.27■□□□□ 0.84
TNFRSF1A-213ENST00000540022 DAAM1Q9Y4D1 1078 aa20.27■□□□□ 0.84
TNFRSF1A-213ENST00000540022 PCDHA11Q9Y5I1 949 aa20.27■□□□□ 0.84
TNFRSF1A-213ENST00000540022 MRPL42Q9Y6G3 142 aaKnown RBP20.27■□□□□ 0.84
TNFRSF1A-213ENST00000540022 NT5C1B-RDH14C9J2C7 533 aa20.27■□□□□ 0.83
TNFRSF1A-213ENST00000540022 TMEM189-UBE2V1I3L0A0 370 aa20.27■□□□□ 0.83
TNFRSF1A-213ENST00000540022 WEE2P0C1S8 567 aa20.27■□□□□ 0.83
TNFRSF1A-213ENST00000540022 TBXAS1P24557 533 aaPredicted RBP20.27■□□□□ 0.83
TNFRSF1A-213ENST00000540022 ADKP55263 362 aaKnown RBP20.27■□□□□ 0.83
TNFRSF1A-213ENST00000540022 CDH8P55286 799 aa20.27■□□□□ 0.83
TNFRSF1A-213ENST00000540022 JAM2P57087 298 aa20.27■□□□□ 0.83
TNFRSF1A-213ENST00000540022 DRAP1Q14919 205 aaPredicted RBP20.27■□□□□ 0.83
TNFRSF1A-213ENST00000540022 TIGD5Q53EQ6 642 aa20.27■□□□□ 0.83
TNFRSF1A-213ENST00000540022 ENOSF1Q7L5Y1 443 aa20.27■□□□□ 0.83
TNFRSF1A-213ENST00000540022 MMS19Q96T76 1030 aa20.27■□□□□ 0.83
TNFRSF1A-213ENST00000540022 GPR88Q9GZN0 384 aa20.27■□□□□ 0.83
TNFRSF1A-213ENST00000540022 LUC7L2Q9Y383 392 aaKnown RBP20.27■□□□□ 0.83
TNFRSF1A-213ENST00000540022 LRRC53A6NM62 1247 aa20.26■□□□□ 0.83
TNFRSF1A-213ENST00000540022 I3L4J1 428 aa20.26■□□□□ 0.83
TNFRSF1A-213ENST00000540022 MFAP3LO75121 409 aa20.26■□□□□ 0.83
TNFRSF1A-213ENST00000540022 CA3P07451 260 aa20.26■□□□□ 0.83
TNFRSF1A-213ENST00000540022 TPM1P09493 284 aa20.26■□□□□ 0.83
TNFRSF1A-213ENST00000540022 PNMA6AP0CW24 399 aaPredicted RBP20.26■□□□□ 0.83
TNFRSF1A-213ENST00000540022 P4HA1P13674 534 aa20.26■□□□□ 0.83
TNFRSF1A-213ENST00000540022 KRT9P35527 623 aa20.26■□□□□ 0.83
TNFRSF1A-213ENST00000540022 RAP1GAPP47736 663 aa20.26■□□□□ 0.83
TNFRSF1A-213ENST00000540022 ZBED6P86452 979 aa20.26■□□□□ 0.83
TNFRSF1A-213ENST00000540022 CCDC173Q0VFZ6 552 aa20.26■□□□□ 0.83
TNFRSF1A-213ENST00000540022 PDXDC1Q6P996 788 aa20.26■□□□□ 0.83
TNFRSF1A-213ENST00000540022 TMEM173Q86WV6 379 aaPredicted RBP20.26■□□□□ 0.83
TNFRSF1A-213ENST00000540022 UBR7Q8N806 425 aa20.26■□□□□ 0.83
TNFRSF1A-213ENST00000540022 TC2NQ8N9U0 490 aa20.26■□□□□ 0.83
TNFRSF1A-213ENST00000540022 SP7Q8TDD2 431 aaPredicted RBP20.26■□□□□ 0.83
TNFRSF1A-213ENST00000540022 SHC3Q92529 594 aa20.26■□□□□ 0.83
TNFRSF1A-213ENST00000540022 SENP8Q96LD8 212 aa20.26■□□□□ 0.83
TNFRSF1A-213ENST00000540022 FAM81BQ96LP2 452 aa20.26■□□□□ 0.83
TNFRSF1A-213ENST00000540022 SPAG5Q96R06 1193 aa20.26■□□□□ 0.83
TNFRSF1A-213ENST00000540022 PPP1R9BQ96SB3 815 aa20.26■□□□□ 0.83
TNFRSF1A-213ENST00000540022 TRANK1O15050 2925 aa20.26■□□□□ 0.83
TNFRSF1A-213ENST00000540022 FNDC1Q4ZHG4 1894 aaPredicted RBP20.25■□□□□ 0.83
TNFRSF1A-213ENST00000540022 AKR1B15C9JRZ8 316 aaPredicted RBP20.25■□□□□ 0.83
TNFRSF1A-213ENST00000540022 F8VZ95 297 aa20.25■□□□□ 0.83
TNFRSF1A-213ENST00000540022 FOXN3O00409 490 aaPredicted RBP20.25■□□□□ 0.83
TNFRSF1A-213ENST00000540022 LINC00271P0C7V0 271 aa20.25■□□□□ 0.83
TNFRSF1A-213ENST00000540022 ACO1P21399 889 aaKnown RBP20.25■□□□□ 0.83
TNFRSF1A-213ENST00000540022 ARID5BQ14865 1188 aa20.25■□□□□ 0.83
TNFRSF1A-213ENST00000540022 SOWAHAQ2M3V2 549 aa20.25■□□□□ 0.83
TNFRSF1A-213ENST00000540022 SPOUT1Q5T280 376 aaKnown RBP20.25■□□□□ 0.83
TNFRSF1A-213ENST00000540022 KCNT2Q6UVM3 1135 aa20.25■□□□□ 0.83
TNFRSF1A-213ENST00000540022 DSTYKQ6XUX3 929 aa20.25■□□□□ 0.83
TNFRSF1A-213ENST00000540022 CCDC186Q7Z3E2 898 aa20.25■□□□□ 0.83
TNFRSF1A-213ENST00000540022 LIMS2Q7Z4I7 341 aa20.25■□□□□ 0.83
TNFRSF1A-213ENST00000540022 FIBCD1Q8N539 461 aa20.25■□□□□ 0.83
TNFRSF1A-213ENST00000540022 COLEC11Q9BWP8 271 aa20.25■□□□□ 0.83
TNFRSF1A-213ENST00000540022 SLC28A3Q9HAS3 691 aa20.25■□□□□ 0.83
TNFRSF1A-213ENST00000540022 CYP3A43Q9HB55 503 aa20.25■□□□□ 0.83
TNFRSF1A-213ENST00000540022 L1RE1Q9UN81 338 aa20.25■□□□□ 0.83
TNFRSF1A-213ENST00000540022 CYB561D2O14569 222 aa20.24■□□□□ 0.83
TNFRSF1A-213ENST00000540022 TADA2AO75478 443 aa20.24■□□□□ 0.83
TNFRSF1A-213ENST00000540022 CD58P19256 250 aa20.24■□□□□ 0.83
TNFRSF1A-213ENST00000540022 PAX3P23760 479 aa20.24■□□□□ 0.83
TNFRSF1A-213ENST00000540022 ALDH7A1P49419 539 aaKnown RBP20.24■□□□□ 0.83
TNFRSF1A-213ENST00000540022 E4F1Q66K89 784 aaPredicted RBP20.24■□□□□ 0.83
TNFRSF1A-213ENST00000540022 GPIHBP1Q8IV16 184 aa20.24■□□□□ 0.83
TNFRSF1A-213ENST00000540022 ZNF397Q8NF99 534 aaPredicted RBP20.24■□□□□ 0.83
TNFRSF1A-213ENST00000540022 BCL7CQ8WUZ0 217 aaPredicted RBP20.24■□□□□ 0.83
TNFRSF1A-213ENST00000540022 JAKMIP2Q96AA8 810 aa20.24■□□□□ 0.83
TNFRSF1A-213ENST00000540022 SUSD3Q96L08 255 aa20.24■□□□□ 0.83
TNFRSF1A-213ENST00000540022 MRPL45Q9BRJ2 306 aaKnown RBP20.24■□□□□ 0.83
TNFRSF1A-213ENST00000540022 CISHQ9NSE2 258 aa20.24■□□□□ 0.83
TNFRSF1A-213ENST00000540022 ADAM28Q9UKQ2 775 aa20.24■□□□□ 0.83
TNFRSF1A-213ENST00000540022 TDRD15B5MCY1 1934 aaKnown RBP20.24■□□□□ 0.83
TNFRSF1A-213ENST00000540022 LINC01553A4QN01 128 aa20.23■□□□□ 0.83
TNFRSF1A-213ENST00000540022 HUS1O60921 280 aa20.23■□□□□ 0.83
TNFRSF1A-213ENST00000540022 FOSL2P15408 326 aa20.23■□□□□ 0.83
TNFRSF1A-213ENST00000540022 LAG3P18627 525 aa20.23■□□□□ 0.83
TNFRSF1A-213ENST00000540022 DPH6Q7L8W6 267 aa20.23■□□□□ 0.83
TNFRSF1A-213ENST00000540022 CNGA4Q8IV77 575 aa20.23■□□□□ 0.83
TNFRSF1A-213ENST00000540022 COLGALT1Q8NBJ5 622 aa20.23■□□□□ 0.83
TNFRSF1A-213ENST00000540022 ZNF558Q96NG5 402 aa20.23■□□□□ 0.83
TNFRSF1A-213ENST00000540022 ABHD10Q9NUJ1 306 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms