RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 DENND4AQ7Z401 1863 aa19.73■□□□□ 0.75
SNRPA1-203ENST00000540017 KINO60870 393 aaKnown RBP19.72■□□□□ 0.75
SNRPA1-203ENST00000540017 PRPF40AO75400 957 aaKnown RBP19.72■□□□□ 0.75
SNRPA1-203ENST00000540017 KIF20AO95235 890 aa19.72■□□□□ 0.75
SNRPA1-203ENST00000540017 SEC24AO95486 1093 aa19.72■□□□□ 0.75
SNRPA1-203ENST00000540017 VNN2O95498 520 aa19.72■□□□□ 0.75
SNRPA1-203ENST00000540017 ATF2P15336 505 aa19.72■□□□□ 0.75
SNRPA1-203ENST00000540017 TNNI1P19237 187 aa19.72■□□□□ 0.75
SNRPA1-203ENST00000540017 PRCPP42785 496 aa19.72■□□□□ 0.75
SNRPA1-203ENST00000540017 UBE2HP62256 183 aa19.72■□□□□ 0.75
SNRPA1-203ENST00000540017 RBP5P82980 135 aa19.72■□□□□ 0.75
SNRPA1-203ENST00000540017 LIN9Q5TKA1 542 aa19.72■□□□□ 0.75
SNRPA1-203ENST00000540017 ZNF658Q5TYW1 1059 aaPredicted RBP19.72■□□□□ 0.75
SNRPA1-203ENST00000540017 RNF19BQ6ZMZ0 732 aa19.72■□□□□ 0.75
SNRPA1-203ENST00000540017 TRAPPC11Q7Z392 1133 aa19.72■□□□□ 0.75
SNRPA1-203ENST00000540017 LRRC52Q8N7C0 313 aa19.72■□□□□ 0.75
SNRPA1-203ENST00000540017 ZNF560Q96MR9 790 aa19.72■□□□□ 0.75
SNRPA1-203ENST00000540017 FNBP1Q96RU3 617 aa19.72■□□□□ 0.75
SNRPA1-203ENST00000540017 RHOBTB2Q9BYZ6 727 aa19.72■□□□□ 0.75
SNRPA1-203ENST00000540017 TSHZ2Q9NRE2 1034 aa19.72■□□□□ 0.75
SNRPA1-203ENST00000540017 RMND1Q9NWS8 449 aa19.72■□□□□ 0.75
SNRPA1-203ENST00000540017 C2CD4DB7Z1M9 353 aa19.71■□□□□ 0.75
SNRPA1-203ENST00000540017 CCL16O15467 120 aa19.71■□□□□ 0.75
SNRPA1-203ENST00000540017 CALUO43852 315 aaPredicted RBP19.71■□□□□ 0.75
SNRPA1-203ENST00000540017 SMC2O95347 1197 aa19.71■□□□□ 0.75
SNRPA1-203ENST00000540017 CST3P01034 146 aaPredicted RBP19.71■□□□□ 0.75
SNRPA1-203ENST00000540017 TNNC2P02585 160 aa19.71■□□□□ 0.75
SNRPA1-203ENST00000540017 PNPLA4P41247 253 aa19.71■□□□□ 0.75
SNRPA1-203ENST00000540017 DLG4P78352 724 aa19.71■□□□□ 0.75
SNRPA1-203ENST00000540017 BFSP1Q12934 665 aa19.71■□□□□ 0.75
SNRPA1-203ENST00000540017 PPM1LQ5SGD2 360 aa19.71■□□□□ 0.75
SNRPA1-203ENST00000540017 ISM2Q6H9L7 571 aa19.71■□□□□ 0.75
SNRPA1-203ENST00000540017 RNF135Q8IUD6 432 aa19.71■□□□□ 0.75
SNRPA1-203ENST00000540017 OR10T2Q8NGX3 314 aa19.71■□□□□ 0.75
SNRPA1-203ENST00000540017 PARD3BQ8TEW8 1205 aa19.71■□□□□ 0.75
SNRPA1-203ENST00000540017 L1RE1Q9UN81 338 aa19.71■□□□□ 0.75
SNRPA1-203ENST00000540017 DOCK6Q96HP0 2047 aa19.7■□□□□ 0.74
SNRPA1-203ENST00000540017 OR6C75A6NL08 312 aa19.7■□□□□ 0.74
SNRPA1-203ENST00000540017 LRRIQ3A6PVS8 624 aaPredicted RBP19.7■□□□□ 0.74
SNRPA1-203ENST00000540017 N4BP1O75113 896 aaKnown RBP19.7■□□□□ 0.74
SNRPA1-203ENST00000540017 HNRNPA1P09651 372 aaKnown RBP eCLIP19.7■□□□□ 0.74
SNRPA1-203ENST00000540017 CPB1P15086 417 aa19.7■□□□□ 0.74
SNRPA1-203ENST00000540017 MYBPC2Q14324 1141 aa19.7■□□□□ 0.74
SNRPA1-203ENST00000540017 NFIL3Q16649 462 aa19.7■□□□□ 0.74
SNRPA1-203ENST00000540017 UVSSAQ2YD98 709 aa19.7■□□□□ 0.74
SNRPA1-203ENST00000540017 CEP135Q66GS9 1140 aa19.7■□□□□ 0.74
SNRPA1-203ENST00000540017 TPGS2Q68CL5 300 aa19.7■□□□□ 0.74
SNRPA1-203ENST00000540017 CYP26C1Q6V0L0 522 aa19.7■□□□□ 0.74
SNRPA1-203ENST00000540017 CLEC17AQ6ZS10 378 aa19.7■□□□□ 0.74
SNRPA1-203ENST00000540017 TCEAL8Q8IYN2 117 aa19.7■□□□□ 0.74
SNRPA1-203ENST00000540017 IPO9Q96P70 1041 aaKnown RBP19.7■□□□□ 0.74
SNRPA1-203ENST00000540017 EPHX3Q9H6B9 360 aa19.7■□□□□ 0.74
SNRPA1-203ENST00000540017 WDR6Q9NNW5 1121 aaKnown RBP19.7■□□□□ 0.74
SNRPA1-203ENST00000540017 HOOK1Q9UJC3 728 aaKnown RBP19.7■□□□□ 0.74
SNRPA1-203ENST00000540017 MAN1B1Q9UKM7 699 aa19.7■□□□□ 0.74
SNRPA1-203ENST00000540017 AKAP3O75969 853 aa19.69■□□□□ 0.74
SNRPA1-203ENST00000540017 BMP6P22004 513 aa19.69■□□□□ 0.74
SNRPA1-203ENST00000540017 NR2F2P24468 414 aa19.69■□□□□ 0.74
SNRPA1-203ENST00000540017 HOXA9P31269 272 aa19.69■□□□□ 0.74
SNRPA1-203ENST00000540017 CDR1P51861 262 aa19.69■□□□□ 0.74
SNRPA1-203ENST00000540017 PMS1P54277 932 aaKnown RBP19.69■□□□□ 0.74
SNRPA1-203ENST00000540017 CLDN10P78369 228 aa19.69■□□□□ 0.74
SNRPA1-203ENST00000540017 NTHL1P78549 312 aa19.69■□□□□ 0.74
SNRPA1-203ENST00000540017 ADCY1Q08828 1119 aa19.69■□□□□ 0.74
SNRPA1-203ENST00000540017 COBLL1Q53SF7 1204 aa19.69■□□□□ 0.74
SNRPA1-203ENST00000540017 C1orf220Q5T0J3 134 aa19.69■□□□□ 0.74
SNRPA1-203ENST00000540017 GRASPQ7Z6J2 395 aaPredicted RBP19.69■□□□□ 0.74
SNRPA1-203ENST00000540017 PDCL2Q8N4E4 241 aa19.69■□□□□ 0.74
SNRPA1-203ENST00000540017 HPDLQ96IR7 371 aa19.69■□□□□ 0.74
SNRPA1-203ENST00000540017 PGLYRP2Q96PD5 576 aa19.69■□□□□ 0.74
SNRPA1-203ENST00000540017 OXCT2Q9BYC2 517 aaPredicted RBP19.69■□□□□ 0.74
SNRPA1-203ENST00000540017 CRISPLD1Q9H336 500 aa19.69■□□□□ 0.74
SNRPA1-203ENST00000540017 PIDD1Q9HB75 910 aa19.69■□□□□ 0.74
SNRPA1-203ENST00000540017 CYP4F11Q9HBI6 524 aa19.69■□□□□ 0.74
SNRPA1-203ENST00000540017 HCFC1R1Q9NWW0 138 aa19.69■□□□□ 0.74
SNRPA1-203ENST00000540017 GDAP2Q9NXN4 497 aa19.69■□□□□ 0.74
SNRPA1-203ENST00000540017 AFF4Q9UHB7 1163 aaKnown RBP19.69■□□□□ 0.74
SNRPA1-203ENST00000540017 DSEQ9UL01 958 aa19.69■□□□□ 0.74
SNRPA1-203ENST00000540017 SNX9Q9Y5X1 595 aa19.69■□□□□ 0.74
SNRPA1-203ENST00000540017 CLUHO75153 1309 aa19.69■□□□□ 0.74
SNRPA1-203ENST00000540017 ARHGEF37A1IGU5 675 aa19.68■□□□□ 0.74
SNRPA1-203ENST00000540017 PRRG1O14668 218 aa19.68■□□□□ 0.74
SNRPA1-203ENST00000540017 CD44P16070 742 aaKnown RBP19.68■□□□□ 0.74
SNRPA1-203ENST00000540017 ELF1P32519 619 aa19.68■□□□□ 0.74
SNRPA1-203ENST00000540017 GPR17Q13304 367 aa19.68■□□□□ 0.74
SNRPA1-203ENST00000540017 CCDC149Q6ZUS6 474 aa19.68■□□□□ 0.74
SNRPA1-203ENST00000540017 METTL23Q86XA0 190 aa19.68■□□□□ 0.74
SNRPA1-203ENST00000540017 ADSSL1Q8N142 457 aa19.68■□□□□ 0.74
SNRPA1-203ENST00000540017 EEF2KMTQ96G04 330 aa19.68■□□□□ 0.74
SNRPA1-203ENST00000540017 MUTYHQ9UIF7 546 aa19.68■□□□□ 0.74
SNRPA1-203ENST00000540017 POLIQ9UNA4 740 aa19.68■□□□□ 0.74
SNRPA1-203ENST00000540017 NR2E1Q9Y466 385 aa19.68■□□□□ 0.74
SNRPA1-203ENST00000540017 ADAM9Q13443 819 aa19.67■□□□□ 0.74
SNRPA1-203ENST00000540017 SOWAHAQ2M3V2 549 aa19.67■□□□□ 0.74
SNRPA1-203ENST00000540017 TDRD10Q5VZ19 366 aaKnown RBP19.67■□□□□ 0.74
SNRPA1-203ENST00000540017 CENPPQ6IPU0 288 aa19.67■□□□□ 0.74
SNRPA1-203ENST00000540017 RTL10Q7L3V2 364 aa19.67■□□□□ 0.74
SNRPA1-203ENST00000540017 LIMS2Q7Z4I7 341 aa19.67■□□□□ 0.74
SNRPA1-203ENST00000540017 LRRTM3Q86VH5 581 aa19.67■□□□□ 0.74
SNRPA1-203ENST00000540017 OSTM1Q86WC4 334 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms