RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 ANO6Q4KMQ2 910 aa6.85□□□□□ -1.31
MRE11-209ENST00000540013 SLC45A4Q5BKX6 768 aa6.85□□□□□ -1.31
MRE11-209ENST00000540013 FAM209BQ5JX69 171 aa6.85□□□□□ -1.31
MRE11-209ENST00000540013 FSTL4Q6MZW2 842 aa6.85□□□□□ -1.31
MRE11-209ENST00000540013 CACNA2D3Q8IZS8 1091 aa6.85□□□□□ -1.31
MRE11-209ENST00000540013 ADAMTS18Q8TE60 1221 aa6.85□□□□□ -1.31
MRE11-209ENST00000540013 PHKBQ93100 1093 aa6.85□□□□□ -1.31
MRE11-209ENST00000540013 HVCN1Q96D96 273 aa6.85□□□□□ -1.31
MRE11-209ENST00000540013 FOXB1Q99853 325 aa6.85□□□□□ -1.31
MRE11-209ENST00000540013 TREX2Q9BQ50 279 aaPredicted RBP6.85□□□□□ -1.31
MRE11-209ENST00000540013 SYT3Q9BQG1 590 aa6.85□□□□□ -1.31
MRE11-209ENST00000540013 CHCHD6Q9BRQ6 235 aa6.85□□□□□ -1.31
MRE11-209ENST00000540013 BTBD2Q9BX70 525 aa6.85□□□□□ -1.31
MRE11-209ENST00000540013 TMEM168Q9H0V1 697 aa6.85□□□□□ -1.31
MRE11-209ENST00000540013 ITM2CQ9NQX7 267 aa6.85□□□□□ -1.31
MRE11-209ENST00000540013 KCND1Q9NSA2 647 aa6.85□□□□□ -1.31
MRE11-209ENST00000540013 NSMCE4AQ9NXX6 385 aa6.85□□□□□ -1.31
MRE11-209ENST00000540013 WASF3Q9UPY6 502 aa6.85□□□□□ -1.31
MRE11-209ENST00000540013 NOC2LQ9Y3T9 749 aaKnown RBP6.85□□□□□ -1.31
MRE11-209ENST00000540013 USP32Q8NFA0 1604 aa6.85□□□□□ -1.31
MRE11-209ENST00000540013 ANKARQ7Z5J8 1434 aa6.84□□□□□ -1.31
MRE11-209ENST00000540013 PABPN1LA6NDY0 278 aaKnown RBP6.84□□□□□ -1.31
MRE11-209ENST00000540013 H0Y858 1186 aa6.84□□□□□ -1.31
MRE11-209ENST00000540013 GOLGA6L22H0YM25 854 aa6.84□□□□□ -1.31
MRE11-209ENST00000540013 KPNA5O15131 536 aa6.84□□□□□ -1.31
MRE11-209ENST00000540013 CYP1A1P04798 512 aaPredicted RBP6.84□□□□□ -1.31
MRE11-209ENST00000540013 VEGFAP15692 232 aaPredicted RBP6.84□□□□□ -1.31
MRE11-209ENST00000540013 PDCP20941 246 aa6.84□□□□□ -1.31
MRE11-209ENST00000540013 XPAP23025 273 aaPredicted RBP6.84□□□□□ -1.31
MRE11-209ENST00000540013 GLRBP48167 497 aa6.84□□□□□ -1.31
MRE11-209ENST00000540013 FXR1P51114 621 aaKnown RBP eCLIP6.84□□□□□ -1.31
MRE11-209ENST00000540013 SLURP1P55000 103 aa6.84□□□□□ -1.31
MRE11-209ENST00000540013 KIAA2012Q0VF49 1180 aa6.84□□□□□ -1.31
MRE11-209ENST00000540013 PRKG1Q13976 671 aa6.84□□□□□ -1.31
MRE11-209ENST00000540013 CNN3Q15417 329 aaKnown RBP6.84□□□□□ -1.31
MRE11-209ENST00000540013 SLC10A5Q5PT55 438 aa6.84□□□□□ -1.31
MRE11-209ENST00000540013 TMTC1Q8IUR5 882 aa6.84□□□□□ -1.31
MRE11-209ENST00000540013 PRR18Q8N4B5 295 aa6.84□□□□□ -1.31
MRE11-209ENST00000540013 ESX1Q8N693 406 aa6.84□□□□□ -1.31
MRE11-209ENST00000540013 STPG3Q8N7X2 389 aa6.84□□□□□ -1.31
MRE11-209ENST00000540013 ZNF527Q8NB42 609 aa6.84□□□□□ -1.31
MRE11-209ENST00000540013 ADAMTS17Q8TE56 1095 aa6.84□□□□□ -1.31
MRE11-209ENST00000540013 ZMAT2Q96NC0 199 aaKnown RBP6.84□□□□□ -1.31
MRE11-209ENST00000540013 TOMM22Q9NS69 142 aa6.84□□□□□ -1.31
MRE11-209ENST00000540013 SLC13A4Q9UKG4 626 aa6.84□□□□□ -1.31
MRE11-209ENST00000540013 ITSN1Q15811 1721 aa6.84□□□□□ -1.31
MRE11-209ENST00000540013 EIF3AQ14152 1382 aaKnown RBP6.83□□□□□ -1.32
MRE11-209ENST00000540013 TULP4Q9NRJ4 1543 aa6.83□□□□□ -1.32
MRE11-209ENST00000540013 UBA6A0AVT1 1052 aaPredicted RBP6.83□□□□□ -1.32
MRE11-209ENST00000540013 PRAMEF22A3QJZ6 481 aa6.83□□□□□ -1.32
MRE11-209ENST00000540013 SYNDIG1LA6NDD5 238 aa6.83□□□□□ -1.32
MRE11-209ENST00000540013 F5H0A9 414 aaPredicted RBP6.83□□□□□ -1.32
MRE11-209ENST00000540013 FOXN3O00409 490 aaPredicted RBP6.83□□□□□ -1.32
MRE11-209ENST00000540013 DDX3XO00571 662 aaKnown RBP eCLIP6.83□□□□□ -1.32
MRE11-209ENST00000540013 FRS3O43559 492 aa6.83□□□□□ -1.32
MRE11-209ENST00000540013 CUTAO60888 179 aa6.83□□□□□ -1.32
MRE11-209ENST00000540013 DTNBO60941 627 aa6.83□□□□□ -1.32
MRE11-209ENST00000540013 MAFO75444 373 aaPredicted RBP6.83□□□□□ -1.32
MRE11-209ENST00000540013 KNG1P01042 644 aa6.83□□□□□ -1.32
MRE11-209ENST00000540013 PSMA3P25788 255 aa6.83□□□□□ -1.32
MRE11-209ENST00000540013 CD40P25942 277 aa6.83□□□□□ -1.32
MRE11-209ENST00000540013 CTNNA1P35221 906 aaKnown RBP6.83□□□□□ -1.32
MRE11-209ENST00000540013 MAPK10P53779 464 aa6.83□□□□□ -1.32
MRE11-209ENST00000540013 ROM1Q03395 351 aa6.83□□□□□ -1.32
MRE11-209ENST00000540013 MAP3K12Q12852 859 aa6.83□□□□□ -1.32
MRE11-209ENST00000540013 STARD3Q14849 445 aa6.83□□□□□ -1.32
MRE11-209ENST00000540013 VMACQ2NL98 169 aa6.83□□□□□ -1.32
MRE11-209ENST00000540013 PGS1Q32NB8 556 aa6.83□□□□□ -1.32
MRE11-209ENST00000540013 TTC38Q5R3I4 469 aa6.83□□□□□ -1.32
MRE11-209ENST00000540013 ZNF610Q8N9Z0 462 aa6.83□□□□□ -1.32
MRE11-209ENST00000540013 TP53I13Q8NBR0 393 aaPredicted RBP6.83□□□□□ -1.32
MRE11-209ENST00000540013 BRI3BPQ8WY22 251 aa6.83□□□□□ -1.32
MRE11-209ENST00000540013 ATP6V1E2Q96A05 226 aa6.83□□□□□ -1.32
MRE11-209ENST00000540013 LCORQ96JN0 433 aaPredicted RBP6.83□□□□□ -1.32
MRE11-209ENST00000540013 MYCBPQ99417 103 aaPredicted RBP6.83□□□□□ -1.32
MRE11-209ENST00000540013 ELF4Q99607 663 aaPredicted RBP6.83□□□□□ -1.32
MRE11-209ENST00000540013 TACO1Q9BSH4 297 aaKnown RBP6.83□□□□□ -1.32
MRE11-209ENST00000540013 LRFN3Q9BTN0 628 aa6.83□□□□□ -1.32
MRE11-209ENST00000540013 STK31Q9BXU1 1019 aa6.83□□□□□ -1.32
MRE11-209ENST00000540013 OR10A5Q9H207 317 aa6.83□□□□□ -1.32
MRE11-209ENST00000540013 BRD9Q9H8M2 597 aa6.83□□□□□ -1.32
MRE11-209ENST00000540013 BARX1Q9HBU1 254 aaPredicted RBP6.83□□□□□ -1.32
MRE11-209ENST00000540013 UCKL1Q9NWZ5 548 aa6.83□□□□□ -1.32
MRE11-209ENST00000540013 DNAJC28Q9NX36 388 aa6.83□□□□□ -1.32
MRE11-209ENST00000540013 USP36Q9P275 1121 aaKnown RBP6.83□□□□□ -1.32
MRE11-209ENST00000540013 MAGED2Q9UNF1 606 aaPredicted RBP6.83□□□□□ -1.32
MRE11-209ENST00000540013 GPR45Q9Y5Y3 372 aa6.83□□□□□ -1.32
MRE11-209ENST00000540013 CDK12Q9NYV4 1490 aaPredicted RBP6.83□□□□□ -1.32
MRE11-209ENST00000540013 TNS3Q68CZ2 1445 aa6.83□□□□□ -1.32
MRE11-209ENST00000540013 SPATA31A3Q5VYP0 1347 aa6.82□□□□□ -1.32
MRE11-209ENST00000540013 ABCA3Q99758 1704 aa6.82□□□□□ -1.32
MRE11-209ENST00000540013 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.82□□□□□ -1.32
MRE11-209ENST00000540013 TRPM3Q9HCF6 1732 aaPredicted RBP6.82□□□□□ -1.32
MRE11-209ENST00000540013 TTC36A6NLP5 189 aa6.82□□□□□ -1.32
MRE11-209ENST00000540013 DVL2O14641 736 aa6.82□□□□□ -1.32
MRE11-209ENST00000540013 IRAK2O43187 625 aa6.82□□□□□ -1.32
MRE11-209ENST00000540013 SKAP2O75563 359 aaPredicted RBP6.82□□□□□ -1.32
MRE11-209ENST00000540013 INMTO95050 263 aa6.82□□□□□ -1.32
MRE11-209ENST00000540013 ARIH2O95376 493 aa6.82□□□□□ -1.32
MRE11-209ENST00000540013 TBX18O95935 607 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms