RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 GPC5P78333 572 aa18.01■□□□□ 0.47
COPS3-212ENST00000539941 FBXO47Q5MNV8 452 aa18.01■□□□□ 0.47
COPS3-212ENST00000539941 ACAD10Q6JQN1 1059 aa18.01■□□□□ 0.47
COPS3-212ENST00000539941 SYCE1Q8N0S2 351 aa18.01■□□□□ 0.47
COPS3-212ENST00000539941 LRRC52Q8N7C0 313 aa18.01■□□□□ 0.47
COPS3-212ENST00000539941 CEP112Q8N8E3 955 aa18.01■□□□□ 0.47
COPS3-212ENST00000539941 MNS1Q8NEH6 495 aa18.01■□□□□ 0.47
COPS3-212ENST00000539941 TPCN2Q8NHX9 752 aa18.01■□□□□ 0.47
COPS3-212ENST00000539941 ZMAT2Q96NC0 199 aaKnown RBP18.01■□□□□ 0.47
COPS3-212ENST00000539941 NXF1Q9UBU9 619 aaKnown RBP18.01■□□□□ 0.47
COPS3-212ENST00000539941 GRID2IPA4D2P6 1211 aa18■□□□□ 0.47
COPS3-212ENST00000539941 KBTBD13C9JR72 458 aa18■□□□□ 0.47
COPS3-212ENST00000539941 ENC1O14682 589 aa18■□□□□ 0.47
COPS3-212ENST00000539941 CYP1A1P04798 512 aaPredicted RBP18■□□□□ 0.47
COPS3-212ENST00000539941 UNGP13051 313 aaPredicted RBP18■□□□□ 0.47
COPS3-212ENST00000539941 CYP3A5P20815 502 aa18■□□□□ 0.47
COPS3-212ENST00000539941 ABCB4P21439 1286 aa18■□□□□ 0.47
COPS3-212ENST00000539941 TRIM11Q96F44 468 aa18■□□□□ 0.47
COPS3-212ENST00000539941 TRAIPQ9BWF2 469 aa18■□□□□ 0.47
COPS3-212ENST00000539941 APOL6Q9BWW8 343 aa18■□□□□ 0.47
COPS3-212ENST00000539941 THAP2Q9H0W7 228 aa18■□□□□ 0.47
COPS3-212ENST00000539941 ERVK-5Q9HDB9 667 aa18■□□□□ 0.47
COPS3-212ENST00000539941 STARD7Q9NQZ5 370 aa18■□□□□ 0.47
COPS3-212ENST00000539941 TRMT13Q9NUP7 481 aaKnown RBP18■□□□□ 0.47
COPS3-212ENST00000539941 PARP2Q9UGN5 583 aa18■□□□□ 0.47
COPS3-212ENST00000539941 SNX12Q9UMY4 172 aa18■□□□□ 0.47
COPS3-212ENST00000539941 POLIQ9UNA4 740 aa18■□□□□ 0.47
COPS3-212ENST00000539941 PAEPP09466 180 aa17.99■□□□□ 0.47
COPS3-212ENST00000539941 WEE2P0C1S8 567 aa17.99■□□□□ 0.47
COPS3-212ENST00000539941 ATF7P17544 494 aaPredicted RBP17.99■□□□□ 0.47
COPS3-212ENST00000539941 TCP1P17987 556 aaKnown RBP17.99■□□□□ 0.47
COPS3-212ENST00000539941 CD58P19256 250 aa17.99■□□□□ 0.47
COPS3-212ENST00000539941 AKAP5P24588 427 aa17.99■□□□□ 0.47
COPS3-212ENST00000539941 RAB27AP51159 221 aa17.99■□□□□ 0.47
COPS3-212ENST00000539941 TNNC1P63316 161 aa17.99■□□□□ 0.47
COPS3-212ENST00000539941 CENPCQ03188 943 aa17.99■□□□□ 0.47
COPS3-212ENST00000539941 NFX1Q12986 1120 aaKnown RBP17.99■□□□□ 0.47
COPS3-212ENST00000539941 PAK2Q13177 524 aa17.99■□□□□ 0.47
COPS3-212ENST00000539941 SCARA5Q6ZMJ2 495 aa17.99■□□□□ 0.47
COPS3-212ENST00000539941 SLFN11Q7Z7L1 901 aa17.99■□□□□ 0.47
COPS3-212ENST00000539941 DNAAF5Q86Y56 855 aa17.99■□□□□ 0.47
COPS3-212ENST00000539941 LRRC57Q8N9N7 239 aa17.99■□□□□ 0.47
COPS3-212ENST00000539941 SLC35G2Q8TBE7 412 aa17.99■□□□□ 0.47
COPS3-212ENST00000539941 CARD6Q9BX69 1037 aa17.99■□□□□ 0.47
COPS3-212ENST00000539941 FAM105AQ9NUU6 356 aa17.99■□□□□ 0.47
COPS3-212ENST00000539941 GTF3C4Q9UKN8 822 aa17.99■□□□□ 0.47
COPS3-212ENST00000539941 HYOU1Q9Y4L1 999 aa17.99■□□□□ 0.47
COPS3-212ENST00000539941 SMIM28A0A1B0GU29 152 aa17.99■□□□□ 0.47
COPS3-212ENST00000539941 TLR3O15455 904 aaKnown RBP17.99■□□□□ 0.47
COPS3-212ENST00000539941 THAP12O43422 761 aa17.99■□□□□ 0.47
COPS3-212ENST00000539941 MTA2O94776 668 aa17.99■□□□□ 0.47
COPS3-212ENST00000539941 MYCP01106 439 aaPredicted RBP17.99■□□□□ 0.47
COPS3-212ENST00000539941 MYBL1P10243 752 aa17.99■□□□□ 0.47
COPS3-212ENST00000539941 GUCY2FP51841 1108 aa17.99■□□□□ 0.47
COPS3-212ENST00000539941 MEI1Q5TIA1 1274 aa17.99■□□□□ 0.47
COPS3-212ENST00000539941 ZNF606Q8WXB4 792 aa17.99■□□□□ 0.47
COPS3-212ENST00000539941 TMEM106CQ9BVX2 250 aa17.99■□□□□ 0.47
COPS3-212ENST00000539941 TLR10Q9BXR5 811 aa17.99■□□□□ 0.47
COPS3-212ENST00000539941 ARVCFO00192 962 aa17.98■□□□□ 0.47
COPS3-212ENST00000539941 DNM1LO00429 736 aa17.98■□□□□ 0.47
COPS3-212ENST00000539941 LSM8O95777 96 aaKnown RBP17.98■□□□□ 0.47
COPS3-212ENST00000539941 CYP1A2P05177 515 aa17.98■□□□□ 0.47
COPS3-212ENST00000539941 TUBB4BP68371 445 aa17.98■□□□□ 0.47
COPS3-212ENST00000539941 MTFR1Q15390 333 aa17.98■□□□□ 0.47
COPS3-212ENST00000539941 ARHGEF26Q96DR7 871 aa17.98■□□□□ 0.47
COPS3-212ENST00000539941 VCPIP1Q96JH7 1222 aa17.98■□□□□ 0.47
COPS3-212ENST00000539941 RNF39Q9H2S5 420 aa17.98■□□□□ 0.47
COPS3-212ENST00000539941 AGO3Q9H9G7 860 aaKnown RBP17.98■□□□□ 0.47
COPS3-212ENST00000539941 PAK6Q9NQU5 681 aaPredicted RBP17.98■□□□□ 0.47
COPS3-212ENST00000539941 UVRAGQ9P2Y5 699 aa17.98■□□□□ 0.47
COPS3-212ENST00000539941 TUBGCP4Q9UGJ1 667 aa17.98■□□□□ 0.47
COPS3-212ENST00000539941 PADI3Q9ULW8 664 aa17.98■□□□□ 0.47
COPS3-212ENST00000539941 EFCAB8A8MWE9 144 aa17.97■□□□□ 0.47
COPS3-212ENST00000539941 ZNF623O75123 536 aa17.97■□□□□ 0.47
COPS3-212ENST00000539941 CILPO75339 1184 aa17.97■□□□□ 0.47
COPS3-212ENST00000539941 PNPLA4P41247 253 aa17.97■□□□□ 0.47
COPS3-212ENST00000539941 NSFP46459 744 aaKnown RBP17.97■□□□□ 0.47
COPS3-212ENST00000539941 CKAP4Q07065 602 aaKnown RBP17.97■□□□□ 0.47
COPS3-212ENST00000539941 INCA1Q0VD86 236 aa17.97■□□□□ 0.47
COPS3-212ENST00000539941 LPIN1Q14693 890 aa17.97■□□□□ 0.47
COPS3-212ENST00000539941 C9orf57Q5W0N0 161 aa17.97■□□□□ 0.47
COPS3-212ENST00000539941 MRPL10Q7Z7H8 261 aaKnown RBP17.97■□□□□ 0.47
COPS3-212ENST00000539941 ZNF560Q96MR9 790 aa17.97■□□□□ 0.47
COPS3-212ENST00000539941 ZNF518BQ9C0D4 1074 aa17.97■□□□□ 0.47
COPS3-212ENST00000539941 CXCL16Q9H2A7 254 aa17.97■□□□□ 0.47
COPS3-212ENST00000539941 SMYD3Q9H7B4 428 aa17.97■□□□□ 0.47
COPS3-212ENST00000539941 AVENQ9NQS1 362 aaPredicted RBP17.97■□□□□ 0.47
COPS3-212ENST00000539941 PSD3Q9NYI0 1048 aa17.97■□□□□ 0.47
COPS3-212ENST00000539941 PCDHGC3Q9UN70 934 aa17.97■□□□□ 0.47
COPS3-212ENST00000539941 PIRO00625 290 aa17.96■□□□□ 0.47
COPS3-212ENST00000539941 MED7O43513 233 aa17.96■□□□□ 0.47
COPS3-212ENST00000539941 TADA3O75528 432 aa17.96■□□□□ 0.47
COPS3-212ENST00000539941 GHRP10912 638 aa17.96■□□□□ 0.47
COPS3-212ENST00000539941 SKIP12755 728 aa17.96■□□□□ 0.47
COPS3-212ENST00000539941 ITGA4P13612 1032 aa17.96■□□□□ 0.47
COPS3-212ENST00000539941 CD52P31358 61 aa17.96■□□□□ 0.47
COPS3-212ENST00000539941 NOMO3P69849 1222 aa17.96■□□□□ 0.47
COPS3-212ENST00000539941 DSC3Q14574 896 aa17.96■□□□□ 0.47
COPS3-212ENST00000539941 ELF2Q15723 593 aa17.96■□□□□ 0.47
COPS3-212ENST00000539941 GLRA4Q5JXX5 417 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms