RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 NPTX2P47972 431 aa16.27■□□□□ 0.2
USB1-203ENST00000539737 GRIN1Q05586 938 aa16.27■□□□□ 0.2
USB1-203ENST00000539737 RAD51AP2Q09MP3 1159 aa16.27■□□□□ 0.2
USB1-203ENST00000539737 MRPL58Q14197 206 aaKnown RBP16.27■□□□□ 0.2
USB1-203ENST00000539737 ST3GAL2Q16842 350 aa16.27■□□□□ 0.2
USB1-203ENST00000539737 XKR4Q5GH76 650 aa16.27■□□□□ 0.2
USB1-203ENST00000539737 PKN3Q6P5Z2 889 aa16.27■□□□□ 0.2
USB1-203ENST00000539737 DDX12PQ92771 950 aa16.27■□□□□ 0.2
USB1-203ENST00000539737 UROC1Q96N76 676 aa16.27■□□□□ 0.2
USB1-203ENST00000539737 PNMA5Q96PV4 448 aa16.27■□□□□ 0.2
USB1-203ENST00000539737 TMEM209Q96SK2 561 aa16.27■□□□□ 0.2
USB1-203ENST00000539737 TIPINQ9BVW5 301 aa16.27■□□□□ 0.2
USB1-203ENST00000539737 CCDC94Q9BW85 323 aaPredicted RBP16.27■□□□□ 0.2
USB1-203ENST00000539737 CCSER1Q9C0I3 900 aa16.27■□□□□ 0.2
USB1-203ENST00000539737 DNAJC25Q9H1X3 360 aa16.27■□□□□ 0.2
USB1-203ENST00000539737 SLITRK6Q9H5Y7 841 aa16.27■□□□□ 0.2
USB1-203ENST00000539737 SEMA4GQ9NTN9 838 aa16.27■□□□□ 0.2
USB1-203ENST00000539737 ANKFY1Q9P2R3 1169 aa16.27■□□□□ 0.2
USB1-203ENST00000539737 TNFSF13BQ9Y275 285 aa16.27■□□□□ 0.2
USB1-203ENST00000539737 SLC27A5Q9Y2P5 690 aa16.27■□□□□ 0.2
USB1-203ENST00000539737 YIPF1Q9Y548 306 aa16.27■□□□□ 0.2
USB1-203ENST00000539737 NUB1Q9Y5A7 615 aa16.27■□□□□ 0.2
USB1-203ENST00000539737 PRR5-ARHGAP8B1AHC4 643 aa16.26■□□□□ 0.19
USB1-203ENST00000539737 K7ESF4 209 aa16.26■□□□□ 0.19
USB1-203ENST00000539737 PPEF2O14830 753 aa16.26■□□□□ 0.19
USB1-203ENST00000539737 ZNF263O14978 683 aa16.26■□□□□ 0.19
USB1-203ENST00000539737 SLC16A4O15374 487 aa16.26■□□□□ 0.19
USB1-203ENST00000539737 TRAPPC3O43617 180 aa16.26■□□□□ 0.19
USB1-203ENST00000539737 HIP1RO75146 1068 aa16.26■□□□□ 0.19
USB1-203ENST00000539737 CPB1P15086 417 aa16.26■□□□□ 0.19
USB1-203ENST00000539737 YARSP54577 528 aaKnown RBP16.26■□□□□ 0.19
USB1-203ENST00000539737 ARHGAP8P85298 464 aa16.26■□□□□ 0.19
USB1-203ENST00000539737 MAPK7Q13164 816 aa16.26■□□□□ 0.19
USB1-203ENST00000539737 SF3A2Q15428 464 aaKnown RBP16.26■□□□□ 0.19
USB1-203ENST00000539737 FOXD4L6Q3SYB3 417 aaPredicted RBP16.26■□□□□ 0.19
USB1-203ENST00000539737 CYP4A22Q5TCH4 519 aa16.26■□□□□ 0.19
USB1-203ENST00000539737 FOXD4L3Q6VB84 417 aaPredicted RBP16.26■□□□□ 0.19
USB1-203ENST00000539737 PRR23CQ6ZRP0 262 aa16.26■□□□□ 0.19
USB1-203ENST00000539737 IRF7Q92985 503 aa16.26■□□□□ 0.19
USB1-203ENST00000539737 DRC1Q96MC2 740 aa16.26■□□□□ 0.19
USB1-203ENST00000539737 HAPLN2Q9GZV7 340 aa16.26■□□□□ 0.19
USB1-203ENST00000539737 SMG9Q9H0W8 520 aaKnown RBP16.26■□□□□ 0.19
USB1-203ENST00000539737 GTSE1Q9NYZ3 720 aa16.26■□□□□ 0.19
USB1-203ENST00000539737 KCND2Q9NZV8 630 aa16.26■□□□□ 0.19
USB1-203ENST00000539737 CCDC39Q9UFE4 941 aa16.26■□□□□ 0.19
USB1-203ENST00000539737 KCNG1Q9UIX4 513 aa16.26■□□□□ 0.19
USB1-203ENST00000539737 RAB23Q9ULC3 237 aa16.26■□□□□ 0.19
USB1-203ENST00000539737 ANK1P16157 1881 aa16.25■□□□□ 0.19
USB1-203ENST00000539737 MAN2B1O00754 1011 aa16.25■□□□□ 0.19
USB1-203ENST00000539737 PLCG1P19174 1290 aa16.25■□□□□ 0.19
USB1-203ENST00000539737 CXCL12P48061 93 aa16.25■□□□□ 0.19
USB1-203ENST00000539737 KRT85P78386 507 aa16.25■□□□□ 0.19
USB1-203ENST00000539737 NUCB2P80303 420 aa16.25■□□□□ 0.19
USB1-203ENST00000539737 TNK2Q07912 1038 aa16.25■□□□□ 0.19
USB1-203ENST00000539737 DMP1Q13316 513 aaPredicted RBP16.25■□□□□ 0.19
USB1-203ENST00000539737 KARSQ15046 597 aaKnown RBP16.25■□□□□ 0.19
USB1-203ENST00000539737 SLC10A6Q3KNW5 377 aa16.25■□□□□ 0.19
USB1-203ENST00000539737 LAIR1Q6GTX8 287 aa16.25■□□□□ 0.19
USB1-203ENST00000539737 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.25■□□□□ 0.19
USB1-203ENST00000539737 TMC8Q8IU68 726 aa16.25■□□□□ 0.19
USB1-203ENST00000539737 ZNF512Q96ME7 567 aaPredicted RBP16.25■□□□□ 0.19
USB1-203ENST00000539737 CLIC6Q96NY7 704 aa16.25■□□□□ 0.19
USB1-203ENST00000539737 TCHPQ9BT92 498 aa16.25■□□□□ 0.19
USB1-203ENST00000539737 LRRC3Q9BY71 257 aa16.25■□□□□ 0.19
USB1-203ENST00000539737 ASAH2Q9NR71 780 aa16.25■□□□□ 0.19
USB1-203ENST00000539737 TFIP11Q9UBB9 837 aaKnown RBP16.25■□□□□ 0.19
USB1-203ENST00000539737 ZDHHC9Q9Y397 364 aa16.25■□□□□ 0.19
USB1-203ENST00000539737 SLC30A4O14863 429 aa16.24■□□□□ 0.19
USB1-203ENST00000539737 CUTAO60888 179 aa16.24■□□□□ 0.19
USB1-203ENST00000539737 PLA2G4BP0C869 781 aa16.24■□□□□ 0.19
USB1-203ENST00000539737 CXCL8P10145 99 aa16.24■□□□□ 0.19
USB1-203ENST00000539737 CCR3P51677 355 aa16.24■□□□□ 0.19
USB1-203ENST00000539737 CACNB1Q02641 598 aaPredicted RBP16.24■□□□□ 0.19
USB1-203ENST00000539737 DNM1Q05193 864 aaKnown RBP16.24■□□□□ 0.19
USB1-203ENST00000539737 DUSP4Q13115 394 aa16.24■□□□□ 0.19
USB1-203ENST00000539737 PON2Q15165 354 aa16.24■□□□□ 0.19
USB1-203ENST00000539737 ZNF280DQ6N043 979 aa16.24■□□□□ 0.19
USB1-203ENST00000539737 FAM160A2Q8N612 972 aaPredicted RBP16.24■□□□□ 0.19
USB1-203ENST00000539737 GPR161Q8N6U8 529 aaKnown RBP16.24■□□□□ 0.19
USB1-203ENST00000539737 SYT2Q8N9I0 419 aaPredicted RBP16.24■□□□□ 0.19
USB1-203ENST00000539737 STKLD1Q8NE28 680 aa16.24■□□□□ 0.19
USB1-203ENST00000539737 EPSTI1Q96J88 318 aa16.24■□□□□ 0.19
USB1-203ENST00000539737 SUSD3Q96L08 255 aa16.24■□□□□ 0.19
USB1-203ENST00000539737 ACAP3Q96P50 834 aa16.24■□□□□ 0.19
USB1-203ENST00000539737 PLIN2Q99541 437 aa16.24■□□□□ 0.19
USB1-203ENST00000539737 MKNK1Q9BUB5 465 aa16.24■□□□□ 0.19
USB1-203ENST00000539737 CNTN3Q9P232 1028 aa16.24■□□□□ 0.19
USB1-203ENST00000539737 STK17AQ9UEE5 414 aa16.24■□□□□ 0.19
USB1-203ENST00000539737 RBM19Q9Y4C8 960 aaKnown RBP16.24■□□□□ 0.19
USB1-203ENST00000539737 NPHP3-ACAD11A0A0J9YXS1 232 aa16.23■□□□□ 0.19
USB1-203ENST00000539737 ZNF197O14709 1029 aa16.23■□□□□ 0.19
USB1-203ENST00000539737 SYN3O14994 580 aa16.23■□□□□ 0.19
USB1-203ENST00000539737 EXTL3O43909 919 aa16.23■□□□□ 0.19
USB1-203ENST00000539737 PRAMEF12O95522 483 aa16.23■□□□□ 0.19
USB1-203ENST00000539737 RETP07949 1114 aa16.23■□□□□ 0.19
USB1-203ENST00000539737 KCNE1P15382 129 aa16.23■□□□□ 0.19
USB1-203ENST00000539737 PROZP22891 400 aa16.23■□□□□ 0.19
USB1-203ENST00000539737 GUCY2CP25092 1073 aa16.23■□□□□ 0.19
USB1-203ENST00000539737 TNFSF9P41273 254 aa16.23■□□□□ 0.19
USB1-203ENST00000539737 KPNA1P52294 538 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms