RNA–Protein interactions for RNA: ENST00000539469.6

PDZRN4-203, Transcript of PDZ domain containing ring finger 4, humanhuman

TSL 1 (best) BASIC

Gene PDZRN4, Length 3,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4-203ENST00000539469 SCLT1Q96NL6 688 aa6.53□□□□□ -1.36
PDZRN4-203ENST00000539469 PPP1R16BQ96T49 567 aa6.53□□□□□ -1.36
PDZRN4-203ENST00000539469 SETD4Q9NVD3 440 aa6.53□□□□□ -1.36
PDZRN4-203ENST00000539469 EHD2Q9NZN4 543 aa6.53□□□□□ -1.36
PDZRN4-203ENST00000539469 LARSQ9P2J5 1176 aaKnown RBP6.53□□□□□ -1.36
PDZRN4-203ENST00000539469 IP6K2Q9UHH9 426 aa6.53□□□□□ -1.36
PDZRN4-203ENST00000539469 FOXD3Q9UJU5 478 aaPredicted RBP6.53□□□□□ -1.36
PDZRN4-203ENST00000539469 IPPQ9Y573 584 aa6.53□□□□□ -1.36
PDZRN4-203ENST00000539469 MKI67P46013 3256 aaKnown RBP6.53□□□□□ -1.36
PDZRN4-203ENST00000539469 MACROD2A1Z1Q3 448 aa6.53□□□□□ -1.36
PDZRN4-203ENST00000539469 KCNJ18B7U540 433 aa6.53□□□□□ -1.36
PDZRN4-203ENST00000539469 CLIC2O15247 247 aa6.53□□□□□ -1.36
PDZRN4-203ENST00000539469 KIAA0754O94854 1291 aa6.53□□□□□ -1.36
PDZRN4-203ENST00000539469 GYPCP04921 128 aa6.53□□□□□ -1.36
PDZRN4-203ENST00000539469 SMIM10L2AP0DMW4 78 aa6.53□□□□□ -1.36
PDZRN4-203ENST00000539469 SMIM10L2BP0DMW5 78 aa6.53□□□□□ -1.36
PDZRN4-203ENST00000539469 HOXD10P28358 340 aa6.53□□□□□ -1.36
PDZRN4-203ENST00000539469 CXCR5P32302 372 aa6.53□□□□□ -1.36
PDZRN4-203ENST00000539469 ZNF200P98182 395 aaPredicted RBP6.53□□□□□ -1.36
PDZRN4-203ENST00000539469 GTF2BQ00403 316 aa6.53□□□□□ -1.36
PDZRN4-203ENST00000539469 APBA1Q02410 837 aa6.53□□□□□ -1.36
PDZRN4-203ENST00000539469 DMP1Q13316 513 aaPredicted RBP6.53□□□□□ -1.36
PDZRN4-203ENST00000539469 KCNJ12Q14500 433 aa6.53□□□□□ -1.36
PDZRN4-203ENST00000539469 NR1I3Q14994 352 aa6.53□□□□□ -1.36
PDZRN4-203ENST00000539469 KRT31Q15323 416 aa6.53□□□□□ -1.36
PDZRN4-203ENST00000539469 TM4SF20Q53R12 229 aa6.53□□□□□ -1.36
PDZRN4-203ENST00000539469 TCP11X2Q5H9J9 407 aa6.53□□□□□ -1.36
PDZRN4-203ENST00000539469 SH3PXD2AQ5TCZ1 1133 aa6.53□□□□□ -1.36
PDZRN4-203ENST00000539469 SLC39A4Q6P5W5 647 aa6.53□□□□□ -1.36
PDZRN4-203ENST00000539469 MTHFD1LQ6UB35 978 aa6.53□□□□□ -1.36
PDZRN4-203ENST00000539469 RNF180Q86T96 592 aa6.53□□□□□ -1.36
PDZRN4-203ENST00000539469 PRPF31Q8WWY3 499 aaKnown RBP6.53□□□□□ -1.36
PDZRN4-203ENST00000539469 ARL8AQ96BM9 186 aa6.53□□□□□ -1.36
PDZRN4-203ENST00000539469 AP5M1Q9H0R1 490 aa6.53□□□□□ -1.36
PDZRN4-203ENST00000539469 CAAP1Q9H8G2 361 aa6.53□□□□□ -1.36
PDZRN4-203ENST00000539469 NPHS2Q9NP85 383 aa6.53□□□□□ -1.36
PDZRN4-203ENST00000539469 XPNPEP3Q9NQH7 507 aa6.53□□□□□ -1.36
PDZRN4-203ENST00000539469 TAB2Q9NYJ8 693 aa6.53□□□□□ -1.36
PDZRN4-203ENST00000539469 ARHGAP28Q9P2N2 729 aa6.53□□□□□ -1.36
PDZRN4-203ENST00000539469 TRAF3IP3Q9Y228 551 aa6.53□□□□□ -1.36
PDZRN4-203ENST00000539469 DUSP10Q9Y6W6 482 aa6.53□□□□□ -1.36
PDZRN4-203ENST00000539469 COL1A2P08123 1366 aa6.53□□□□□ -1.36
PDZRN4-203ENST00000539469 UBE4BO95155 1302 aa6.53□□□□□ -1.36
PDZRN4-203ENST00000539469 BICDL2A1A5D9 508 aa6.52□□□□□ -1.36
PDZRN4-203ENST00000539469 DENND3A2RUS2 1198 aa6.52□□□□□ -1.36
PDZRN4-203ENST00000539469 ANKRD63C9JTQ0 380 aa6.52□□□□□ -1.36
PDZRN4-203ENST00000539469 MFAP3LO75121 409 aa6.52□□□□□ -1.36
PDZRN4-203ENST00000539469 GNRH1P01148 92 aa6.52□□□□□ -1.36
PDZRN4-203ENST00000539469 KRT14P02533 472 aa6.52□□□□□ -1.36
PDZRN4-203ENST00000539469 RARBP10826 455 aa6.52□□□□□ -1.36
PDZRN4-203ENST00000539469 KLRC1P26715 233 aa6.52□□□□□ -1.36
PDZRN4-203ENST00000539469 PPP1R2P41236 205 aa6.52□□□□□ -1.36
PDZRN4-203ENST00000539469 CASP4P49662 377 aa6.52□□□□□ -1.36
PDZRN4-203ENST00000539469 PSEN2P49810 448 aa6.52□□□□□ -1.36
PDZRN4-203ENST00000539469 SEC24CP53992 1094 aa6.52□□□□□ -1.36
PDZRN4-203ENST00000539469 RTP1P59025 263 aa6.52□□□□□ -1.36
PDZRN4-203ENST00000539469 NKX3-2P78367 333 aa6.52□□□□□ -1.36
PDZRN4-203ENST00000539469 ZBED6P86452 979 aa6.52□□□□□ -1.36
PDZRN4-203ENST00000539469 LRRC63Q05C16 580 aa6.52□□□□□ -1.36
PDZRN4-203ENST00000539469 PPFIA1Q13136 1202 aa6.52□□□□□ -1.36
PDZRN4-203ENST00000539469 ZNF484Q5JVG2 852 aa6.52□□□□□ -1.36
PDZRN4-203ENST00000539469 DESI1Q6ICB0 168 aa6.52□□□□□ -1.36
PDZRN4-203ENST00000539469 EFCAB12Q6NXP0 572 aa6.52□□□□□ -1.36
PDZRN4-203ENST00000539469 CXCL17Q6UXB2 119 aa6.52□□□□□ -1.36
PDZRN4-203ENST00000539469 RUFY4Q6ZNE9 571 aa6.52□□□□□ -1.36
PDZRN4-203ENST00000539469 MAATS1Q7Z4T9 603 aa6.52□□□□□ -1.36
PDZRN4-203ENST00000539469 MFSD3Q96ES6 412 aa6.52□□□□□ -1.36
PDZRN4-203ENST00000539469 CNOT6LQ96LI5 555 aaKnown RBP6.52□□□□□ -1.36
PDZRN4-203ENST00000539469 LRGUKQ96M69 825 aa6.52□□□□□ -1.36
PDZRN4-203ENST00000539469 NTPCRQ9BSD7 190 aaKnown RBP6.52□□□□□ -1.36
PDZRN4-203ENST00000539469 ST6GALNAC4Q9H4F1 302 aa6.52□□□□□ -1.36
PDZRN4-203ENST00000539469 THAP9Q9H5L6 903 aa6.52□□□□□ -1.36
PDZRN4-203ENST00000539469 KMT5AQ9NQR1 393 aa6.52□□□□□ -1.36
PDZRN4-203ENST00000539469 KLK14Q9P0G3 267 aa6.52□□□□□ -1.36
PDZRN4-203ENST00000539469 LRRIQ4A6NIV6 560 aa6.52□□□□□ -1.37
PDZRN4-203ENST00000539469 N4BP3O15049 544 aa6.52□□□□□ -1.37
PDZRN4-203ENST00000539469 TLR3O15455 904 aaKnown RBP6.52□□□□□ -1.37
PDZRN4-203ENST00000539469 CPP00450 1065 aa6.52□□□□□ -1.37
PDZRN4-203ENST00000539469 VTNP04004 478 aa6.52□□□□□ -1.37
PDZRN4-203ENST00000539469 TNFAIP3P21580 790 aa6.52□□□□□ -1.37
PDZRN4-203ENST00000539469 CALRP27797 417 aaKnown RBP6.52□□□□□ -1.37
PDZRN4-203ENST00000539469 GRK4P32298 578 aa6.52□□□□□ -1.37
PDZRN4-203ENST00000539469 KRT9P35527 623 aa6.52□□□□□ -1.37
PDZRN4-203ENST00000539469 SOX9P48436 509 aa6.52□□□□□ -1.37
PDZRN4-203ENST00000539469 ADAM17P78536 824 aa6.52□□□□□ -1.37
PDZRN4-203ENST00000539469 GUCY1A3Q02108 690 aa6.52□□□□□ -1.37
PDZRN4-203ENST00000539469 LAMTOR4Q0VGL1 99 aa6.52□□□□□ -1.37
PDZRN4-203ENST00000539469 USP4Q13107 963 aa6.52□□□□□ -1.37
PDZRN4-203ENST00000539469 GNASQ5JWF2 1037 aa6.52□□□□□ -1.37
PDZRN4-203ENST00000539469 RHPN2Q8IUC4 686 aa6.52□□□□□ -1.37
PDZRN4-203ENST00000539469 MAP4K3Q8IVH8 894 aa6.52□□□□□ -1.37
PDZRN4-203ENST00000539469 METTL13Q8N6R0 699 aa6.52□□□□□ -1.37
PDZRN4-203ENST00000539469 KLHDC9Q8NEP7 349 aa6.52□□□□□ -1.37
PDZRN4-203ENST00000539469 AGPAT3Q9NRZ7 376 aa6.52□□□□□ -1.37
PDZRN4-203ENST00000539469 LIMA1Q9UHB6 759 aaKnown RBP6.52□□□□□ -1.37
PDZRN4-203ENST00000539469 DDX20Q9UHI6 824 aaKnown RBP6.52□□□□□ -1.37
PDZRN4-203ENST00000539469 TBX20Q9UMR3 447 aa6.52□□□□□ -1.37
PDZRN4-203ENST00000539469 MYH10P35580 1976 aa6.52□□□□□ -1.37
PDZRN4-203ENST00000539469 A0A1B0GTH6 734 aa6.52□□□□□ -1.37
PDZRN4-203ENST00000539469 PDXKO00764 312 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms