RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 C4orf46Q504U0 113 aa3.81□□□□□ -1.8
SNHG1-210ENST00000539303 DGKKQ5KSL6 1271 aa3.81□□□□□ -1.8
SNHG1-210ENST00000539303 METRNLQ641Q3 311 aa3.81□□□□□ -1.8
SNHG1-210ENST00000539303 SLFN13Q68D06 897 aa3.81□□□□□ -1.8
SNHG1-210ENST00000539303 EFCAB12Q6NXP0 572 aa3.81□□□□□ -1.8
SNHG1-210ENST00000539303 APBB1IPQ7Z5R6 666 aaPredicted RBP3.81□□□□□ -1.8
SNHG1-210ENST00000539303 PLEKHH3Q7Z736 793 aa3.81□□□□□ -1.8
SNHG1-210ENST00000539303 FAM83AQ86UY5 434 aa3.81□□□□□ -1.8
SNHG1-210ENST00000539303 ZFPM1Q8IX07 1006 aa3.81□□□□□ -1.8
SNHG1-210ENST00000539303 FITM2Q8N6M3 262 aa3.81□□□□□ -1.8
SNHG1-210ENST00000539303 ATP11CQ8NB49 1132 aa3.81□□□□□ -1.8
SNHG1-210ENST00000539303 RAPGEF4Q8WZA2 1011 aa3.81□□□□□ -1.8
SNHG1-210ENST00000539303 ST8SIA2Q92186 375 aa3.81□□□□□ -1.8
SNHG1-210ENST00000539303 SUCLG2Q96I99 432 aa3.81□□□□□ -1.8
SNHG1-210ENST00000539303 SNX22Q96L94 193 aa3.81□□□□□ -1.8
SNHG1-210ENST00000539303 STK31Q9BXU1 1019 aa3.81□□□□□ -1.8
SNHG1-210ENST00000539303 TEX101Q9BY14 249 aa3.81□□□□□ -1.8
SNHG1-210ENST00000539303 CHST8Q9H2A9 424 aa3.81□□□□□ -1.8
SNHG1-210ENST00000539303 NELFAQ9H3P2 528 aa3.81□□□□□ -1.8
SNHG1-210ENST00000539303 TBC1D23Q9NUY8 699 aa3.81□□□□□ -1.8
SNHG1-210ENST00000539303 RLIMQ9NVW2 624 aa3.81□□□□□ -1.8
SNHG1-210ENST00000539303 POGKQ9P215 609 aa3.81□□□□□ -1.8
SNHG1-210ENST00000539303 ZFR2Q9UPR6 939 aaKnown RBP3.81□□□□□ -1.8
SNHG1-210ENST00000539303 HDAC5Q9UQL6 1122 aa3.81□□□□□ -1.8
SNHG1-210ENST00000539303 CDYLQ9Y232 598 aa3.81□□□□□ -1.8
SNHG1-210ENST00000539303 PCDHGB3Q9Y5G1 929 aa3.81□□□□□ -1.8
SNHG1-210ENST00000539303 MORC2Q9Y6X9 1032 aaPredicted RBP3.81□□□□□ -1.8
SNHG1-210ENST00000539303 ZNF536O15090 1300 aa3.8□□□□□ -1.8
SNHG1-210ENST00000539303 A0A087WWL8 130 aa3.8□□□□□ -1.8
SNHG1-210ENST00000539303 A0A087WZ62 844 aa3.8□□□□□ -1.8
SNHG1-210ENST00000539303 OTOL1A6NHN0 477 aaPredicted RBP3.8□□□□□ -1.8
SNHG1-210ENST00000539303 PYCARD-AS1I3L0S3 204 aa3.8□□□□□ -1.8
SNHG1-210ENST00000539303 PRICKLE3O43900 615 aaPredicted RBP3.8□□□□□ -1.8
SNHG1-210ENST00000539303 NDST3O95803 873 aa3.8□□□□□ -1.8
SNHG1-210ENST00000539303 GNAI2P04899 355 aa3.8□□□□□ -1.8
SNHG1-210ENST00000539303 PIM1P11309 404 aaPredicted RBP3.8□□□□□ -1.8
SNHG1-210ENST00000539303 ALAS1P13196 640 aa3.8□□□□□ -1.8
SNHG1-210ENST00000539303 RPL17P18621 184 aaKnown RBP3.8□□□□□ -1.8
SNHG1-210ENST00000539303 FDXRP22570 491 aa3.8□□□□□ -1.8
SNHG1-210ENST00000539303 CHKAP35790 457 aa3.8□□□□□ -1.8
SNHG1-210ENST00000539303 RPS19P39019 145 aaKnown RBP3.8□□□□□ -1.8
SNHG1-210ENST00000539303 HSPA7P48741 367 aa3.8□□□□□ -1.8
SNHG1-210ENST00000539303 RABGGTBP53611 331 aa3.8□□□□□ -1.8
SNHG1-210ENST00000539303 TNFAIP2Q03169 654 aa3.8□□□□□ -1.8
SNHG1-210ENST00000539303 SLC30A10Q6XR72 485 aa3.8□□□□□ -1.8
SNHG1-210ENST00000539303 Q6ZRM9 215 aa3.8□□□□□ -1.8
SNHG1-210ENST00000539303 LCNL1Q6ZST4 164 aa3.8□□□□□ -1.8
SNHG1-210ENST00000539303 PDSS2Q86YH6 399 aa3.8□□□□□ -1.8
SNHG1-210ENST00000539303 SP8Q8IXZ3 490 aa3.8□□□□□ -1.8
SNHG1-210ENST00000539303 TXLNBQ8N3L3 684 aa3.8□□□□□ -1.8
SNHG1-210ENST00000539303 D2HGDHQ8N465 521 aa3.8□□□□□ -1.8
SNHG1-210ENST00000539303 ZNF808Q8N4W9 903 aaPredicted RBP3.8□□□□□ -1.8
SNHG1-210ENST00000539303 ANKRD42Q8N9B4 389 aa3.8□□□□□ -1.8
SNHG1-210ENST00000539303 MDGA1Q8NFP4 955 aa3.8□□□□□ -1.8
SNHG1-210ENST00000539303 NLGN4YQ8NFZ3 816 aaPredicted RBP3.8□□□□□ -1.8
SNHG1-210ENST00000539303 ZFP28Q8NHY6 868 aa3.8□□□□□ -1.8
SNHG1-210ENST00000539303 ATXN2LQ8WWM7 1075 aaKnown RBP3.8□□□□□ -1.8
SNHG1-210ENST00000539303 LRRC46Q96FV0 321 aa3.8□□□□□ -1.8
SNHG1-210ENST00000539303 MARS2Q96GW9 593 aaKnown RBP3.8□□□□□ -1.8
SNHG1-210ENST00000539303 ZSWIM1Q9BR11 485 aa3.8□□□□□ -1.8
SNHG1-210ENST00000539303 TTLL2Q9BWV7 592 aa3.8□□□□□ -1.8
SNHG1-210ENST00000539303 TTYH3Q9C0H2 523 aa3.8□□□□□ -1.8
SNHG1-210ENST00000539303 MS4A7Q9GZW8 240 aaPredicted RBP3.8□□□□□ -1.8
SNHG1-210ENST00000539303 ARFGAP3Q9NP61 516 aa3.8□□□□□ -1.8
SNHG1-210ENST00000539303 MYO1AQ9UBC5 1043 aa3.8□□□□□ -1.8
SNHG1-210ENST00000539303 HSFX1Q9UBD0 423 aa3.8□□□□□ -1.8
SNHG1-210ENST00000539303 XPR1Q9UBH6 696 aa3.8□□□□□ -1.8
SNHG1-210ENST00000539303 MID2Q9UJV3 735 aa3.8□□□□□ -1.8
SNHG1-210ENST00000539303 ITGB1BP2Q9UKP3 347 aa3.8□□□□□ -1.8
SNHG1-210ENST00000539303 PADI4Q9UM07 663 aa3.8□□□□□ -1.8
SNHG1-210ENST00000539303 MAN2B2Q9Y2E5 1009 aa3.8□□□□□ -1.8
SNHG1-210ENST00000539303 LRCH1Q9Y2L9 728 aa3.8□□□□□ -1.8
SNHG1-210ENST00000539303 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.8□□□□□ -1.8
SNHG1-210ENST00000539303 CCDC189A1A4V9 331 aa3.79□□□□□ -1.8
SNHG1-210ENST00000539303 DCLK1O15075 740 aa3.79□□□□□ -1.8
SNHG1-210ENST00000539303 ZNF185O15231 689 aa3.79□□□□□ -1.8
SNHG1-210ENST00000539303 INHBBP09529 407 aa3.79□□□□□ -1.8
SNHG1-210ENST00000539303 EEF1GP26641 437 aaKnown RBP3.79□□□□□ -1.8
SNHG1-210ENST00000539303 PDIA3P30101 505 aaKnown RBP3.79□□□□□ -1.8
SNHG1-210ENST00000539303 APOBEC3AP31941 199 aaPredicted RBP3.79□□□□□ -1.8
SNHG1-210ENST00000539303 TXKP42681 527 aa3.79□□□□□ -1.8
SNHG1-210ENST00000539303 CARSP49589 748 aaKnown RBP3.79□□□□□ -1.8
SNHG1-210ENST00000539303 MC2RQ01718 297 aa3.79□□□□□ -1.8
SNHG1-210ENST00000539303 BTKQ06187 659 aa3.79□□□□□ -1.8
SNHG1-210ENST00000539303 GALNT1Q10472 559 aaPredicted RBP3.79□□□□□ -1.8
SNHG1-210ENST00000539303 RAB32Q13637 225 aa3.79□□□□□ -1.8
SNHG1-210ENST00000539303 STARD3Q14849 445 aa3.79□□□□□ -1.8
SNHG1-210ENST00000539303 ELF2Q15723 593 aa3.79□□□□□ -1.8
SNHG1-210ENST00000539303 FAM102AQ5T9C2 384 aaPredicted RBP3.79□□□□□ -1.8
SNHG1-210ENST00000539303 LMBRD2Q68DH5 695 aaPredicted RBP3.79□□□□□ -1.8
SNHG1-210ENST00000539303 MFSD5Q6N075 450 aa3.79□□□□□ -1.8
SNHG1-210ENST00000539303 PPP1R32Q7Z5V6 425 aa3.79□□□□□ -1.8
SNHG1-210ENST00000539303 KCTD20Q7Z5Y7 419 aa3.79□□□□□ -1.8
SNHG1-210ENST00000539303 ZNF280BQ86YH2 543 aa3.79□□□□□ -1.8
SNHG1-210ENST00000539303 MYLK4Q86YV6 388 aaPredicted RBP3.79□□□□□ -1.8
SNHG1-210ENST00000539303 DNERQ8NFT8 737 aa3.79□□□□□ -1.8
SNHG1-210ENST00000539303 BRI3BPQ8WY22 251 aa3.79□□□□□ -1.8
SNHG1-210ENST00000539303 SCAMP4Q969E2 229 aa3.79□□□□□ -1.8
SNHG1-210ENST00000539303 IQCDQ96DY2 449 aa3.79□□□□□ -1.8
SNHG1-210ENST00000539303 KCNC2Q96PR1 638 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms