RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 ENOSF1Q7L5Y1 443 aa15.15■□□□□ 0.02
CD4-208ENST00000538827 GPR88Q9GZN0 384 aa15.15■□□□□ 0.02
CD4-208ENST00000538827 TBC1D13Q9NVG8 400 aa15.15■□□□□ 0.02
CD4-208ENST00000538827 THEGQ9P2T0 379 aa15.15■□□□□ 0.02
CD4-208ENST00000538827 MYO6Q9UM54 1294 aa15.15■□□□□ 0.02
CD4-208ENST00000538827 HCN4Q9Y3Q4 1203 aa15.15■□□□□ 0.02
CD4-208ENST00000538827 PCDHB4Q9Y5E5 795 aa15.15■□□□□ 0.02
CD4-208ENST00000538827 ANO9A1A5B4 782 aa15.14■□□□□ 0.01
CD4-208ENST00000538827 INPPL1O15357 1258 aa15.14■□□□□ 0.01
CD4-208ENST00000538827 FGBP02675 491 aa15.14■□□□□ 0.01
CD4-208ENST00000538827 SKILP12757 684 aa15.14■□□□□ 0.01
CD4-208ENST00000538827 FERP16591 822 aa15.14■□□□□ 0.01
CD4-208ENST00000538827 CCZ1BP86790 482 aa15.14■□□□□ 0.01
CD4-208ENST00000538827 CCZ1P86791 482 aaPredicted RBP15.14■□□□□ 0.01
CD4-208ENST00000538827 KLHL30Q0D2K2 578 aa15.14■□□□□ 0.01
CD4-208ENST00000538827 GRIN2CQ14957 1233 aa15.14■□□□□ 0.01
CD4-208ENST00000538827 NAB2Q15742 525 aa15.14■□□□□ 0.01
CD4-208ENST00000538827 PSRC1Q6PGN9 363 aaPredicted RBP15.14■□□□□ 0.01
CD4-208ENST00000538827 TMCO2Q7Z6W1 182 aaPredicted RBP15.14■□□□□ 0.01
CD4-208ENST00000538827 HASPINQ8TF76 798 aa15.14■□□□□ 0.01
CD4-208ENST00000538827 SHC3Q92529 594 aa15.14■□□□□ 0.01
CD4-208ENST00000538827 UROC1Q96N76 676 aa15.14■□□□□ 0.01
CD4-208ENST00000538827 MRPL9Q9BYD2 267 aaKnown RBP15.14■□□□□ 0.01
CD4-208ENST00000538827 KANSL3Q9P2N6 904 aa15.14■□□□□ 0.01
CD4-208ENST00000538827 SNX9Q9Y5X1 595 aa15.14■□□□□ 0.01
CD4-208ENST00000538827 KIAA1671Q9BY89 1806 aa15.14■□□□□ 0.01
CD4-208ENST00000538827 SOWAHDA6NJG2 315 aa15.13■□□□□ 0.01
CD4-208ENST00000538827 FOXN3O00409 490 aaPredicted RBP15.13■□□□□ 0.01
CD4-208ENST00000538827 PIRO00625 290 aa15.13■□□□□ 0.01
CD4-208ENST00000538827 STAU1O95793 577 aaKnown RBP15.13■□□□□ 0.01
CD4-208ENST00000538827 WEE2P0C1S8 567 aa15.13■□□□□ 0.01
CD4-208ENST00000538827 OR1G1P47890 313 aa15.13■□□□□ 0.01
CD4-208ENST00000538827 CYP26C1Q6V0L0 522 aa15.13■□□□□ 0.01
CD4-208ENST00000538827 DSTYKQ6XUX3 929 aa15.13■□□□□ 0.01
CD4-208ENST00000538827 ZNF365Q70YC5 407 aa15.13■□□□□ 0.01
CD4-208ENST00000538827 ZNF280BQ86YH2 543 aa15.13■□□□□ 0.01
CD4-208ENST00000538827 FMNL3Q8IVF7 1028 aa15.13■□□□□ 0.01
CD4-208ENST00000538827 LRRC43Q8N309 656 aa15.13■□□□□ 0.01
CD4-208ENST00000538827 RBBP8NLQ8NC74 664 aaPredicted RBP15.13■□□□□ 0.01
CD4-208ENST00000538827 CASD1Q96PB1 797 aa15.13■□□□□ 0.01
CD4-208ENST00000538827 PAAF1Q9BRP4 392 aa15.13■□□□□ 0.01
CD4-208ENST00000538827 SDCBP2Q9H190 292 aa15.13■□□□□ 0.01
CD4-208ENST00000538827 DEF6Q9H4E7 631 aa15.13■□□□□ 0.01
CD4-208ENST00000538827 VRTNQ9H8Y1 702 aa15.13■□□□□ 0.01
CD4-208ENST00000538827 PRG3Q9Y2Y8 225 aaPredicted RBP15.13■□□□□ 0.01
CD4-208ENST00000538827 COL4A6Q14031 1691 aa15.12■□□□□ 0.01
CD4-208ENST00000538827 KPNA7A9QM74 516 aa15.12■□□□□ 0.01
CD4-208ENST00000538827 SPTLC1O15269 473 aa15.12■□□□□ 0.01
CD4-208ENST00000538827 CYP26A1O43174 497 aa15.12■□□□□ 0.01
CD4-208ENST00000538827 B4GALT3O60512 393 aa15.12■□□□□ 0.01
CD4-208ENST00000538827 DDHD2O94830 711 aa15.12■□□□□ 0.01
CD4-208ENST00000538827 SERPING1P05155 500 aa15.12■□□□□ 0.01
CD4-208ENST00000538827 CCDC172P0C7W6 258 aa15.12■□□□□ 0.01
CD4-208ENST00000538827 RPL9P32969 192 aaKnown RBP15.12■□□□□ 0.01
CD4-208ENST00000538827 EPHB4P54760 987 aa15.12■□□□□ 0.01
CD4-208ENST00000538827 MEA1Q16626 185 aa15.12■□□□□ 0.01
CD4-208ENST00000538827 SPOUT1Q5T280 376 aaKnown RBP15.12■□□□□ 0.01
CD4-208ENST00000538827 TMEM270Q6UE05 265 aa15.12■□□□□ 0.01
CD4-208ENST00000538827 TMEM139Q8IV31 216 aa15.12■□□□□ 0.01
CD4-208ENST00000538827 C3orf58Q8NDZ4 430 aa15.12■□□□□ 0.01
CD4-208ENST00000538827 SYN2Q92777 582 aaPredicted RBP15.12■□□□□ 0.01
CD4-208ENST00000538827 DDX27Q96GQ7 796 aaKnown RBP15.12■□□□□ 0.01
CD4-208ENST00000538827 RNPC3Q96LT9 517 aaKnown RBP15.12■□□□□ 0.01
CD4-208ENST00000538827 GAS2L1Q99501 681 aaPredicted RBP15.12■□□□□ 0.01
CD4-208ENST00000538827 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.12■□□□□ 0.01
CD4-208ENST00000538827 BCO2Q9BYV7 579 aa15.12■□□□□ 0.01
CD4-208ENST00000538827 CISHQ9NSE2 258 aa15.12■□□□□ 0.01
CD4-208ENST00000538827 SEPT11Q9NVA2 429 aaKnown RBP15.12■□□□□ 0.01
CD4-208ENST00000538827 HCSTQ9UBK5 93 aa15.12■□□□□ 0.01
CD4-208ENST00000538827 DNAJB4Q9UDY4 337 aa15.12■□□□□ 0.01
CD4-208ENST00000538827 PUF60Q9UHX1 559 aaKnown RBP15.12■□□□□ 0.01
CD4-208ENST00000538827 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.11■□□□□ 0.01
CD4-208ENST00000538827 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.11■□□□□ 0.01
CD4-208ENST00000538827 HUS1O60921 280 aa15.11■□□□□ 0.01
CD4-208ENST00000538827 B3GAT3O94766 335 aa15.11■□□□□ 0.01
CD4-208ENST00000538827 KIF4AO95239 1232 aa15.11■□□□□ 0.01
CD4-208ENST00000538827 CALCAP01258 141 aa15.11■□□□□ 0.01
CD4-208ENST00000538827 PLEKP08567 350 aaPredicted RBP15.11■□□□□ 0.01
CD4-208ENST00000538827 EIF4A3P38919 411 aaKnown RBP15.11■□□□□ 0.01
CD4-208ENST00000538827 PDE6CP51160 858 aa15.11■□□□□ 0.01
CD4-208ENST00000538827 CDH8P55286 799 aa15.11■□□□□ 0.01
CD4-208ENST00000538827 ORC1Q13415 861 aa15.11■□□□□ 0.01
CD4-208ENST00000538827 MTF1Q14872 753 aa15.11■□□□□ 0.01
CD4-208ENST00000538827 UPP1Q16831 310 aa15.11■□□□□ 0.01
CD4-208ENST00000538827 ZNF394Q53GI3 561 aa15.11■□□□□ 0.01
CD4-208ENST00000538827 WDR59Q6PJI9 974 aa15.11■□□□□ 0.01
CD4-208ENST00000538827 TMTC1Q8IUR5 882 aa15.11■□□□□ 0.01
CD4-208ENST00000538827 COLGALT2Q8IYK4 626 aa15.11■□□□□ 0.01
CD4-208ENST00000538827 FAM71AQ8IYT1 594 aa15.11■□□□□ 0.01
CD4-208ENST00000538827 UBR7Q8N806 425 aa15.11■□□□□ 0.01
CD4-208ENST00000538827 CHP1Q99653 195 aa15.11■□□□□ 0.01
CD4-208ENST00000538827 ZNF576Q9H609 170 aa15.11■□□□□ 0.01
CD4-208ENST00000538827 HAUS4Q9H6D7 363 aa15.11■□□□□ 0.01
CD4-208ENST00000538827 NRDE2Q9H7Z3 1164 aa15.11■□□□□ 0.01
CD4-208ENST00000538827 CYP3A43Q9HB55 503 aa15.11■□□□□ 0.01
CD4-208ENST00000538827 AIPL1Q9NZN9 384 aa15.11■□□□□ 0.01
CD4-208ENST00000538827 F8W810 466 aa15.1■□□□□ 0.01
CD4-208ENST00000538827 I3L4J1 428 aa15.1■□□□□ 0.01
CD4-208ENST00000538827 ARHGAP6O43182 974 aa15.1■□□□□ 0.01
CD4-208ENST00000538827 ACO1P21399 889 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms