RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 VPS9D1Q9Y2B5 631 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 PRG3Q9Y2Y8 225 aaPredicted RBP7.23□□□□□ -1.25
SORT1-209ENST00000538502 KCNQ3O43525 872 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 PRKAB2O43741 272 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 BBOX1O75936 387 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 FDX1P10109 184 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 MLH1P40692 756 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 EIF2B2P49770 351 aaKnown RBP7.23□□□□□ -1.25
SORT1-209ENST00000538502 FMR1Q06787 632 aaKnown RBP eCLIP7.23□□□□□ -1.25
SORT1-209ENST00000538502 DCTN2Q13561 401 aaKnown RBP7.23□□□□□ -1.25
SORT1-209ENST00000538502 DGUOKQ16854 277 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 DSTYKQ6XUX3 929 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 IKBIPQ70UQ0 350 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 LINC00523Q86TU6 105 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 PGBD4Q96DM1 585 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 MAP3K14Q99558 947 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 BTBD10Q9BSF8 475 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 TASP1Q9H6P5 420 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 ARHGEF38Q9NXL2 777 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 ENOPH1Q9UHY7 261 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 COMMD3-BMI1R4GMX3 469 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 HEG1Q9ULI3 1381 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 TET3O43151 1660 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 KRT87PA6NCN2 255 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 KIF28PB7ZC32 967 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 CFAP99D6REC4 459 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 FMO5P49326 533 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 TOP3AQ13472 1001 aaPredicted RBP7.23□□□□□ -1.25
SORT1-209ENST00000538502 TAB1Q15750 504 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 CCDC142Q17RM4 750 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 IZUMO2Q6UXV1 221 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 C4orf33Q8N1A6 199 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 TPCN2Q8NHX9 752 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 PDCD6IPQ8WUM4 868 aaKnown RBP7.23□□□□□ -1.25
SORT1-209ENST00000538502 GLMNQ92990 594 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 VPS50Q96JG6 964 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 BBS2Q9BXC9 721 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 BSDC1Q9NW68 430 aaPredicted RBP7.23□□□□□ -1.25
SORT1-209ENST00000538502 DDX20Q9UHI6 824 aaKnown RBP7.23□□□□□ -1.25
SORT1-209ENST00000538502 USP6P35125 1406 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 F8VZ95 297 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 HUS1O60921 280 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 OCM2P0CE71 109 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 OCMP0CE72 109 aaPredicted RBP7.22□□□□□ -1.25
SORT1-209ENST00000538502 ATP6V1B1P15313 513 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 STAT3P40763 770 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 IL12RB1P42701 662 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 QARSP47897 775 aaKnown RBP7.22□□□□□ -1.25
SORT1-209ENST00000538502 HSD17B4P51659 736 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 EFNA5P52803 228 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 C21orf59P57076 290 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 PSMC5P62195 406 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 ROR2Q01974 943 aaKnown RBP7.22□□□□□ -1.25
SORT1-209ENST00000538502 KRT33BQ14525 404 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 EPHA7Q15375 998 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 USPL1Q5W0Q7 1092 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 C1orf228Q6PIY5 440 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 ELMSAN1Q6PJG2 1045 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 NOA1Q8NC60 698 aaKnown RBP7.22□□□□□ -1.25
SORT1-209ENST00000538502 RIN2Q8WYP3 895 aaPredicted RBP7.22□□□□□ -1.25
SORT1-209ENST00000538502 ZFYVE19Q96K21 471 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 EVPLLA8MZ36 301 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 WFS1O76024 890 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 STIP1P31948 543 aaKnown RBP7.22□□□□□ -1.25
SORT1-209ENST00000538502 COPB2P35606 906 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 NUDT2P50583 147 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 MTMR1Q13613 665 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 OASLQ15646 514 aaKnown RBP7.22□□□□□ -1.25
SORT1-209ENST00000538502 FAM102AQ5T9C2 384 aaPredicted RBP7.22□□□□□ -1.25
SORT1-209ENST00000538502 PLEKHA7Q6IQ23 1121 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 IYDQ6PHW0 289 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 THNSL1Q8IYQ7 743 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 ABI1Q8IZP0 508 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 DLG3Q92796 817 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 FAM213AQ9BRX8 229 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 AP5M1Q9H0R1 490 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 HMG20AQ9NP66 347 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 STK32BQ9NY57 414 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 RSL24D1Q9UHA3 163 aaKnown RBP7.22□□□□□ -1.25
SORT1-209ENST00000538502 HAO1Q9UJM8 370 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 POTEMA6NI47 508 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 PPEF1O14829 653 aaPredicted RBP7.22□□□□□ -1.25
SORT1-209ENST00000538502 KCNA6P17658 529 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 TBL3Q12788 808 aaKnown RBP7.22□□□□□ -1.25
SORT1-209ENST00000538502 USP10Q14694 798 aaKnown RBP7.22□□□□□ -1.25
SORT1-209ENST00000538502 C19orf18Q8NEA5 215 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 OR2W6PQ8NHA6 318 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 CABLES1Q8TDN4 633 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 OXER1Q8TDS5 423 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 PLEKHA8Q96JA3 519 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 ELMO2Q96JJ3 720 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 PRRG3Q9BZD7 231 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 GOLPH3Q9H4A6 298 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 WDR70Q9NW82 654 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 PCDHB8Q9UN66 801 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 AREL1O15033 823 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 TLR2O60603 784 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 MED26O95402 600 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 TSPY1Q01534 308 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 DUOXA2Q1HG44 320 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms