RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 SOWAHAQ2M3V2 549 aa14.09□□□□□ -0.15
CHFR-216ENST00000538235 DCAF17Q5H9S7 520 aaPredicted RBP14.09□□□□□ -0.15
CHFR-216ENST00000538235 SYCE2Q6PIF2 218 aa14.09□□□□□ -0.15
CHFR-216ENST00000538235 SPATA31D4Q6ZUB0 917 aa14.09□□□□□ -0.15
CHFR-216ENST00000538235 FILIP1Q7Z7B0 1213 aa14.09□□□□□ -0.15
CHFR-216ENST00000538235 PDCL2Q8N4E4 241 aa14.09□□□□□ -0.15
CHFR-216ENST00000538235 TTC9BQ8N6N2 239 aa14.09□□□□□ -0.15
CHFR-216ENST00000538235 EFHBQ8N7U6 833 aa14.09□□□□□ -0.15
CHFR-216ENST00000538235 CNOT6LQ96LI5 555 aaKnown RBP14.09□□□□□ -0.15
CHFR-216ENST00000538235 LPIN3Q9BQK8 851 aa14.09□□□□□ -0.15
CHFR-216ENST00000538235 MRPL45Q9BRJ2 306 aaKnown RBP14.09□□□□□ -0.15
CHFR-216ENST00000538235 GTPBP4Q9BZE4 634 aaKnown RBP14.09□□□□□ -0.15
CHFR-216ENST00000538235 TLE6Q9H808 572 aa14.09□□□□□ -0.15
CHFR-216ENST00000538235 HMGXB4Q9UGU5 601 aa14.09□□□□□ -0.15
CHFR-216ENST00000538235 PUF60Q9UHX1 559 aaKnown RBP14.09□□□□□ -0.15
CHFR-216ENST00000538235 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.08□□□□□ -0.16
CHFR-216ENST00000538235 BICDL2A1A5D9 508 aa14.08□□□□□ -0.16
CHFR-216ENST00000538235 NRG2O14511 850 aaPredicted RBP14.08□□□□□ -0.16
CHFR-216ENST00000538235 CYB561D2O14569 222 aa14.08□□□□□ -0.16
CHFR-216ENST00000538235 SYN3O14994 580 aa14.08□□□□□ -0.16
CHFR-216ENST00000538235 SLC34A2O95436 690 aa14.08□□□□□ -0.16
CHFR-216ENST00000538235 RBP5P82980 135 aa14.08□□□□□ -0.16
CHFR-216ENST00000538235 ROR1Q01973 937 aa14.08□□□□□ -0.16
CHFR-216ENST00000538235 NCOA4Q13772 614 aa14.08□□□□□ -0.16
CHFR-216ENST00000538235 STX1AQ16623 288 aa14.08□□□□□ -0.16
CHFR-216ENST00000538235 ANO6Q4KMQ2 910 aa14.08□□□□□ -0.16
CHFR-216ENST00000538235 LILRA6Q6PI73 481 aa14.08□□□□□ -0.16
CHFR-216ENST00000538235 C12orf76Q8N812 135 aaPredicted RBP14.08□□□□□ -0.16
CHFR-216ENST00000538235 HPDLQ96IR7 371 aa14.08□□□□□ -0.16
CHFR-216ENST00000538235 MSLNLQ96KJ4 702 aa14.08□□□□□ -0.16
CHFR-216ENST00000538235 PKMYT1Q99640 499 aa14.08□□□□□ -0.16
CHFR-216ENST00000538235 ARID3AQ99856 593 aa14.08□□□□□ -0.16
CHFR-216ENST00000538235 UBE2ZQ9H832 354 aaPredicted RBP14.08□□□□□ -0.16
CHFR-216ENST00000538235 TMEM8AQ9HCN3 771 aa14.08□□□□□ -0.16
CHFR-216ENST00000538235 MRPL17Q9NRX2 175 aaKnown RBP14.08□□□□□ -0.16
CHFR-216ENST00000538235 TMLHEQ9NVH6 421 aa14.08□□□□□ -0.16
CHFR-216ENST00000538235 GDAP2Q9NXN4 497 aa14.08□□□□□ -0.16
CHFR-216ENST00000538235 SNX9Q9Y5X1 595 aa14.08□□□□□ -0.16
CHFR-216ENST00000538235 CDY1Q9Y6F8 540 aa14.08□□□□□ -0.16
CHFR-216ENST00000538235 MYH10P35580 1976 aa14.08□□□□□ -0.16
CHFR-216ENST00000538235 MYO16Q9Y6X6 1858 aa14.08□□□□□ -0.16
CHFR-216ENST00000538235 CARNS1A5YM72 827 aa14.07□□□□□ -0.16
CHFR-216ENST00000538235 H3BQ06 376 aaPredicted RBP14.07□□□□□ -0.16
CHFR-216ENST00000538235 TGM5O43548 720 aa14.07□□□□□ -0.16
CHFR-216ENST00000538235 OAZ2O95190 189 aa14.07□□□□□ -0.16
CHFR-216ENST00000538235 SEC24AO95486 1093 aa14.07□□□□□ -0.16
CHFR-216ENST00000538235 STAU1O95793 577 aaKnown RBP14.07□□□□□ -0.16
CHFR-216ENST00000538235 ASS1P00966 412 aaKnown RBP14.07□□□□□ -0.16
CHFR-216ENST00000538235 TYMPP19971 482 aa14.07□□□□□ -0.16
CHFR-216ENST00000538235 ACAT1P24752 427 aaKnown RBP14.07□□□□□ -0.16
CHFR-216ENST00000538235 ERCC5P28715 1186 aaPredicted RBP14.07□□□□□ -0.16
CHFR-216ENST00000538235 OR1D2P34982 312 aa14.07□□□□□ -0.16
CHFR-216ENST00000538235 ASPAP45381 313 aa14.07□□□□□ -0.16
CHFR-216ENST00000538235 MXI1P50539 228 aa14.07□□□□□ -0.16
CHFR-216ENST00000538235 APBA1Q02410 837 aa14.07□□□□□ -0.16
CHFR-216ENST00000538235 ENPEPQ07075 957 aa14.07□□□□□ -0.16
CHFR-216ENST00000538235 ELAVL2Q12926 359 aaKnown RBP14.07□□□□□ -0.16
CHFR-216ENST00000538235 BIRC3Q13489 604 aa14.07□□□□□ -0.16
CHFR-216ENST00000538235 CLUL1Q15846 466 aa14.07□□□□□ -0.16
CHFR-216ENST00000538235 ZSCAN23Q3MJ62 389 aa14.07□□□□□ -0.16
CHFR-216ENST00000538235 SV2CQ496J9 727 aa14.07□□□□□ -0.16
CHFR-216ENST00000538235 MIIPQ5JXC2 388 aa14.07□□□□□ -0.16
CHFR-216ENST00000538235 CDKAL1Q5VV42 579 aa14.07□□□□□ -0.16
CHFR-216ENST00000538235 SLC8B1Q6J4K2 584 aa14.07□□□□□ -0.16
CHFR-216ENST00000538235 PDE12Q6L8Q7 609 aaKnown RBP14.07□□□□□ -0.16
CHFR-216ENST00000538235 DSTYKQ6XUX3 929 aa14.07□□□□□ -0.16
CHFR-216ENST00000538235 SCARA5Q6ZMJ2 495 aa14.07□□□□□ -0.16
CHFR-216ENST00000538235 FRMD5Q7Z6J6 570 aa14.07□□□□□ -0.16
CHFR-216ENST00000538235 LRRTM3Q86VH5 581 aa14.07□□□□□ -0.16
CHFR-216ENST00000538235 PALB2Q86YC2 1186 aa14.07□□□□□ -0.16
CHFR-216ENST00000538235 LMO3Q8TAP4 145 aa14.07□□□□□ -0.16
CHFR-216ENST00000538235 CACTINQ8WUQ7 758 aaKnown RBP14.07□□□□□ -0.16
CHFR-216ENST00000538235 PABPC5Q96DU9 382 aaKnown RBP14.07□□□□□ -0.16
CHFR-216ENST00000538235 ZNF560Q96MR9 790 aa14.07□□□□□ -0.16
CHFR-216ENST00000538235 APOL5Q9BWW9 433 aa14.07□□□□□ -0.16
CHFR-216ENST00000538235 VRTNQ9H8Y1 702 aa14.07□□□□□ -0.16
CHFR-216ENST00000538235 CLDND1Q9NY35 253 aa14.07□□□□□ -0.16
CHFR-216ENST00000538235 FNIP2Q9P278 1114 aa14.07□□□□□ -0.16
CHFR-216ENST00000538235 ARMCX3Q9UH62 379 aaPredicted RBP14.07□□□□□ -0.16
CHFR-216ENST00000538235 FBXW11Q9UKB1 542 aa14.07□□□□□ -0.16
CHFR-216ENST00000538235 BACE2Q9Y5Z0 518 aa14.07□□□□□ -0.16
CHFR-216ENST00000538235 ANAPC1Q9H1A4 1944 aa14.07□□□□□ -0.16
CHFR-216ENST00000538235 GRXCR2A6NFK2 248 aa14.06□□□□□ -0.16
CHFR-216ENST00000538235 GABRDO14764 452 aa14.06□□□□□ -0.16
CHFR-216ENST00000538235 IKBKBO14920 756 aa14.06□□□□□ -0.16
CHFR-216ENST00000538235 ATP2C2O75185 946 aa14.06□□□□□ -0.16
CHFR-216ENST00000538235 RFPL2O75678 378 aa14.06□□□□□ -0.16
CHFR-216ENST00000538235 WEE2P0C1S8 567 aa14.06□□□□□ -0.16
CHFR-216ENST00000538235 ODC1P11926 461 aa14.06□□□□□ -0.16
CHFR-216ENST00000538235 KRT13P13646 458 aa14.06□□□□□ -0.16
CHFR-216ENST00000538235 LMO2P25791 158 aa14.06□□□□□ -0.16
CHFR-216ENST00000538235 PIK3CAP42336 1068 aa14.06□□□□□ -0.16
CHFR-216ENST00000538235 FMO5P49326 533 aa14.06□□□□□ -0.16
CHFR-216ENST00000538235 NDUFV1P49821 464 aa14.06□□□□□ -0.16
CHFR-216ENST00000538235 KCNQ1P51787 676 aa14.06□□□□□ -0.16
CHFR-216ENST00000538235 CDH8P55286 799 aa14.06□□□□□ -0.16
CHFR-216ENST00000538235 CCDC40Q4G0X9 1142 aa14.06□□□□□ -0.16
CHFR-216ENST00000538235 CTXN3Q4LDR2 81 aa14.06□□□□□ -0.16
CHFR-216ENST00000538235 TCERG1LQ5VWI1 586 aa14.06□□□□□ -0.16
CHFR-216ENST00000538235 OVOS1Q6IE37 1185 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms