RNA–Protein interactions for RNA: ENST00000537849.1

SPARC-207, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 218 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-207ENST00000537849 SCARA5Q6ZMJ2 495 aa12.54□□□□□ -0.4
SPARC-207ENST00000537849 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.54□□□□□ -0.4
SPARC-207ENST00000537849 RBBP8NLQ8NC74 664 aaPredicted RBP12.54□□□□□ -0.4
SPARC-207ENST00000537849 EPS8L1Q8TE68 723 aa12.54□□□□□ -0.4
SPARC-207ENST00000537849 CASD1Q96PB1 797 aa12.54□□□□□ -0.4
SPARC-207ENST00000537849 PCDHB18PQ96TA0 734 aa12.54□□□□□ -0.4
SPARC-207ENST00000537849 PAAF1Q9BRP4 392 aa12.54□□□□□ -0.4
SPARC-207ENST00000537849 DEF6Q9H4E7 631 aa12.54□□□□□ -0.4
SPARC-207ENST00000537849 FAM124BQ9H5Z6 455 aaPredicted RBP12.54□□□□□ -0.4
SPARC-207ENST00000537849 CACNG4Q9UBN1 327 aa12.54□□□□□ -0.4
SPARC-207ENST00000537849 INPP5FQ9Y2H2 1132 aa12.54□□□□□ -0.4
SPARC-207ENST00000537849 PCDHA13Q9Y5I0 950 aa12.54□□□□□ -0.4
SPARC-207ENST00000537849 RCCD1A6NED2 376 aa12.53□□□□□ -0.4
SPARC-207ENST00000537849 ZSCAN12O43309 604 aa12.53□□□□□ -0.4
SPARC-207ENST00000537849 B4GALT3O60512 393 aa12.53□□□□□ -0.4
SPARC-207ENST00000537849 CILPO75339 1184 aa12.53□□□□□ -0.4
SPARC-207ENST00000537849 ABL1P00519 1130 aa12.53□□□□□ -0.4
SPARC-207ENST00000537849 CCDC175P0C221 793 aa12.53□□□□□ -0.4
SPARC-207ENST00000537849 CSF2RAP15509 400 aa12.53□□□□□ -0.4
SPARC-207ENST00000537849 CD58P19256 250 aa12.53□□□□□ -0.4
SPARC-207ENST00000537849 ARHGAP25P42331 645 aa12.53□□□□□ -0.4
SPARC-207ENST00000537849 MAGEA1P43355 309 aa12.53□□□□□ -0.4
SPARC-207ENST00000537849 CLCNKBP51801 687 aa12.53□□□□□ -0.4
SPARC-207ENST00000537849 RAD23BP54727 409 aa12.53□□□□□ -0.4
SPARC-207ENST00000537849 YWHAEP62258 255 aaKnown RBP12.53□□□□□ -0.4
SPARC-207ENST00000537849 KRT83P78385 493 aa12.53□□□□□ -0.4
SPARC-207ENST00000537849 FMO1Q01740 532 aa12.53□□□□□ -0.4
SPARC-207ENST00000537849 CDR2Q01850 454 aa12.53□□□□□ -0.4
SPARC-207ENST00000537849 DSC1Q08554 894 aa12.53□□□□□ -0.4
SPARC-207ENST00000537849 INCA1Q0VD86 236 aa12.53□□□□□ -0.4
SPARC-207ENST00000537849 TUSC3Q13454 348 aa12.53□□□□□ -0.4
SPARC-207ENST00000537849 SOWAHAQ2M3V2 549 aa12.53□□□□□ -0.4
SPARC-207ENST00000537849 ZNF662Q6ZS27 426 aa12.53□□□□□ -0.4
SPARC-207ENST00000537849 ZNF280BQ86YH2 543 aa12.53□□□□□ -0.4
SPARC-207ENST00000537849 RPUSD2Q8IZ73 545 aaKnown RBP12.53□□□□□ -0.4
SPARC-207ENST00000537849 DDX27Q96GQ7 796 aaKnown RBP12.53□□□□□ -0.4
SPARC-207ENST00000537849 PPP1R13BQ96KQ4 1090 aa12.53□□□□□ -0.4
SPARC-207ENST00000537849 ZSWIM1Q9BR11 485 aa12.53□□□□□ -0.4
SPARC-207ENST00000537849 MRPL45Q9BRJ2 306 aaKnown RBP12.53□□□□□ -0.4
SPARC-207ENST00000537849 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.53□□□□□ -0.4
SPARC-207ENST00000537849 ELOVL4Q9GZR5 314 aa12.53□□□□□ -0.4
SPARC-207ENST00000537849 PRDM5Q9NQX1 630 aaPredicted RBP12.53□□□□□ -0.4
SPARC-207ENST00000537849 KANSL3Q9P2N6 904 aa12.53□□□□□ -0.4
SPARC-207ENST00000537849 NAGPAQ9UK23 515 aa12.53□□□□□ -0.4
SPARC-207ENST00000537849 BARX2Q9UMQ3 279 aaPredicted RBP12.53□□□□□ -0.4
SPARC-207ENST00000537849 NME7Q9Y5B8 376 aa12.53□□□□□ -0.4
SPARC-207ENST00000537849 SNX9Q9Y5X1 595 aa12.53□□□□□ -0.4
SPARC-207ENST00000537849 LTBP2Q14767 1821 aa12.53□□□□□ -0.4
SPARC-207ENST00000537849 ABHD14A-ACY1A0A1B0GW23 586 aa12.52□□□□□ -0.41
SPARC-207ENST00000537849 CASTOR2A6NHX0 329 aa12.52□□□□□ -0.41
SPARC-207ENST00000537849 PODXLO00592 558 aa12.52□□□□□ -0.41
SPARC-207ENST00000537849 PJA2O43164 708 aa12.52□□□□□ -0.41
SPARC-207ENST00000537849 TACC1O75410 805 aa12.52□□□□□ -0.41
SPARC-207ENST00000537849 MMEP08473 750 aa12.52□□□□□ -0.41
SPARC-207ENST00000537849 AARSP49588 968 aaKnown RBP eCLIP12.52□□□□□ -0.41
SPARC-207ENST00000537849 GATMP50440 423 aa12.52□□□□□ -0.41
SPARC-207ENST00000537849 TNNC1P63316 161 aa12.52□□□□□ -0.41
SPARC-207ENST00000537849 SPA17Q15506 151 aa12.52□□□□□ -0.41
SPARC-207ENST00000537849 SV2CQ496J9 727 aa12.52□□□□□ -0.41
SPARC-207ENST00000537849 ALKBH5Q6P6C2 394 aaKnown RBP12.52□□□□□ -0.41
SPARC-207ENST00000537849 DCLRE1AQ6PJP8 1040 aa12.52□□□□□ -0.41
SPARC-207ENST00000537849 C16orf59Q7L2K0 433 aa12.52□□□□□ -0.41
SPARC-207ENST00000537849 DPH6Q7L8W6 267 aa12.52□□□□□ -0.41
SPARC-207ENST00000537849 ZNF677Q86XU0 584 aa12.52□□□□□ -0.41
SPARC-207ENST00000537849 PALB2Q86YC2 1186 aa12.52□□□□□ -0.41
SPARC-207ENST00000537849 NPAS4Q8IUM7 802 aa12.52□□□□□ -0.41
SPARC-207ENST00000537849 GLYCTKQ8IVS8 523 aa12.52□□□□□ -0.41
SPARC-207ENST00000537849 COLGALT2Q8IYK4 626 aa12.52□□□□□ -0.41
SPARC-207ENST00000537849 TMEM199Q8N511 208 aa12.52□□□□□ -0.41
SPARC-207ENST00000537849 TTC39CQ8N584 583 aa12.52□□□□□ -0.41
SPARC-207ENST00000537849 SLC4A11Q8NBS3 891 aa12.52□□□□□ -0.41
SPARC-207ENST00000537849 C3orf58Q8NDZ4 430 aa12.52□□□□□ -0.41
SPARC-207ENST00000537849 ZNF606Q8WXB4 792 aa12.52□□□□□ -0.41
SPARC-207ENST00000537849 RABGGTAQ92696 567 aa12.52□□□□□ -0.41
SPARC-207ENST00000537849 ZNF560Q96MR9 790 aa12.52□□□□□ -0.41
SPARC-207ENST00000537849 UROC1Q96N76 676 aa12.52□□□□□ -0.41
SPARC-207ENST00000537849 TWNKQ96RR1 684 aa12.52□□□□□ -0.41
SPARC-207ENST00000537849 MMS19Q96T76 1030 aa12.52□□□□□ -0.41
SPARC-207ENST00000537849 LACRTQ9GZZ8 138 aa12.52□□□□□ -0.41
SPARC-207ENST00000537849 TBC1D13Q9NVG8 400 aa12.52□□□□□ -0.41
SPARC-207ENST00000537849 LRFN2Q9ULH4 789 aa12.52□□□□□ -0.41
SPARC-207ENST00000537849 TFR2Q9UP52 801 aa12.52□□□□□ -0.41
SPARC-207ENST00000537849 CCP110O43303 1012 aa12.51□□□□□ -0.41
SPARC-207ENST00000537849 CLSTN1O94985 981 aa12.51□□□□□ -0.41
SPARC-207ENST00000537849 CFHP08603 1231 aa12.51□□□□□ -0.41
SPARC-207ENST00000537849 PAEPP09466 180 aa12.51□□□□□ -0.41
SPARC-207ENST00000537849 GZMAP12544 262 aa12.51□□□□□ -0.41
SPARC-207ENST00000537849 VAV2P52735 878 aa12.51□□□□□ -0.41
SPARC-207ENST00000537849 ZNF394Q53GI3 561 aa12.51□□□□□ -0.41
SPARC-207ENST00000537849 CCDC122Q5T0U0 273 aa12.51□□□□□ -0.41
SPARC-207ENST00000537849 C10orf76Q5T2E6 689 aa12.51□□□□□ -0.41
SPARC-207ENST00000537849 TAF3Q5VWG9 929 aa12.51□□□□□ -0.41
SPARC-207ENST00000537849 VPS36Q86VN1 386 aa12.51□□□□□ -0.41
SPARC-207ENST00000537849 DNAAF5Q86Y56 855 aa12.51□□□□□ -0.41
SPARC-207ENST00000537849 URGCPQ8TCY9 931 aa12.51□□□□□ -0.41
SPARC-207ENST00000537849 KBTBD7Q8WVZ9 684 aa12.51□□□□□ -0.41
SPARC-207ENST00000537849 TFAP2BQ92481 460 aa12.51□□□□□ -0.41
SPARC-207ENST00000537849 TMEM176AQ96HP8 235 aa12.51□□□□□ -0.41
SPARC-207ENST00000537849 SENP8Q96LD8 212 aa12.51□□□□□ -0.41
SPARC-207ENST00000537849 ISCUQ9H1K1 167 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms