RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 EIF3BP55884 814 aaKnown RBP16.64■□□□□ 0.25
MKS1-204ENST00000537529 GNGT1P63211 74 aa16.64■□□□□ 0.25
MKS1-204ENST00000537529 CCL15Q16663 113 aa16.64■□□□□ 0.25
MKS1-204ENST00000537529 GJC2Q5T442 439 aaPredicted RBP16.64■□□□□ 0.25
MKS1-204ENST00000537529 EMC10Q5UCC4 262 aa16.64■□□□□ 0.25
MKS1-204ENST00000537529 SYDE1Q6ZW31 735 aaPredicted RBP16.64■□□□□ 0.25
MKS1-204ENST00000537529 KATNAL2Q8IYT4 538 aa16.64■□□□□ 0.25
MKS1-204ENST00000537529 LINC01465Q8N7H1 131 aa16.64■□□□□ 0.25
MKS1-204ENST00000537529 CEP120Q8N960 986 aa16.64■□□□□ 0.25
MKS1-204ENST00000537529 OR2W6PQ8NHA6 318 aa16.64■□□□□ 0.25
MKS1-204ENST00000537529 AFG1LQ8WV93 481 aa16.64■□□□□ 0.25
MKS1-204ENST00000537529 IFT122Q9HBG6 1241 aa16.64■□□□□ 0.25
MKS1-204ENST00000537529 MORF4L1Q9UBU8 362 aa16.64■□□□□ 0.25
MKS1-204ENST00000537529 PCDHGC3Q9UN70 934 aa16.64■□□□□ 0.25
MKS1-204ENST00000537529 AKT3Q9Y243 479 aa16.64■□□□□ 0.25
MKS1-204ENST00000537529 SCN4AP35499 1836 aa16.63■□□□□ 0.25
MKS1-204ENST00000537529 BTBD19C9JJ37 291 aa16.63■□□□□ 0.25
MKS1-204ENST00000537529 TMOD1P28289 359 aa16.63■□□□□ 0.25
MKS1-204ENST00000537529 PPP1R7Q15435 360 aa16.63■□□□□ 0.25
MKS1-204ENST00000537529 KYAT1Q16773 422 aa16.63■□□□□ 0.25
MKS1-204ENST00000537529 AGBL2Q5U5Z8 902 aa16.63■□□□□ 0.25
MKS1-204ENST00000537529 DNAJC24Q6P3W2 148 aa16.63■□□□□ 0.25
MKS1-204ENST00000537529 MAMDC4Q6UXC1 1216 aa16.63■□□□□ 0.25
MKS1-204ENST00000537529 ANKRD23Q86SG2 305 aa16.63■□□□□ 0.25
MKS1-204ENST00000537529 CDR2LQ86X02 465 aaPredicted RBP16.63■□□□□ 0.25
MKS1-204ENST00000537529 CCDC50Q8IVM0 306 aa16.63■□□□□ 0.25
MKS1-204ENST00000537529 FBXO25Q8TCJ0 367 aa16.63■□□□□ 0.25
MKS1-204ENST00000537529 GRK7Q8WTQ7 553 aa16.63■□□□□ 0.25
MKS1-204ENST00000537529 C1orf54Q8WWF1 131 aa16.63■□□□□ 0.25
MKS1-204ENST00000537529 HOMER3Q9NSC5 361 aa16.63■□□□□ 0.25
MKS1-204ENST00000537529 CLEC11AQ9Y240 323 aa16.63■□□□□ 0.25
MKS1-204ENST00000537529 PTPN22Q9Y2R2 807 aa16.63■□□□□ 0.25
MKS1-204ENST00000537529 PLXNB2O15031 1838 aa16.63■□□□□ 0.25
MKS1-204ENST00000537529 ZEB2O60315 1214 aa16.63■□□□□ 0.25
MKS1-204ENST00000537529 WEE2P0C1S8 567 aa16.63■□□□□ 0.25
MKS1-204ENST00000537529 PMS2P54278 862 aa16.63■□□□□ 0.25
MKS1-204ENST00000537529 TAP1Q03518 808 aa16.63■□□□□ 0.25
MKS1-204ENST00000537529 ZNF394Q53GI3 561 aa16.63■□□□□ 0.25
MKS1-204ENST00000537529 FAXDC2Q96IV6 333 aa16.63■□□□□ 0.25
MKS1-204ENST00000537529 MS4A4AQ96JQ5 239 aa16.63■□□□□ 0.25
MKS1-204ENST00000537529 CENPHQ9H3R5 247 aa16.63■□□□□ 0.25
MKS1-204ENST00000537529 ZSWIM8A7E2V4 1837 aa16.63■□□□□ 0.25
MKS1-204ENST00000537529 A0A087WZ62 844 aa16.62■□□□□ 0.25
MKS1-204ENST00000537529 GPR25O00155 361 aa16.62■□□□□ 0.25
MKS1-204ENST00000537529 EIF3HO15372 352 aaKnown RBP eCLIP16.62■□□□□ 0.25
MKS1-204ENST00000537529 KRT19P08727 400 aa16.62■□□□□ 0.25
MKS1-204ENST00000537529 IQCF3P0C7M6 154 aa16.62■□□□□ 0.25
MKS1-204ENST00000537529 ZNF286BP0CG31 522 aa16.62■□□□□ 0.25
MKS1-204ENST00000537529 STAG3L1P0CL83 205 aa16.62■□□□□ 0.25
MKS1-204ENST00000537529 EIF4BP23588 611 aaKnown RBP16.62■□□□□ 0.25
MKS1-204ENST00000537529 CDH5P33151 784 aaPredicted RBP16.62■□□□□ 0.25
MKS1-204ENST00000537529 CETN2P41208 172 aa16.62■□□□□ 0.25
MKS1-204ENST00000537529 ADCYAP1R1P41586 468 aa16.62■□□□□ 0.25
MKS1-204ENST00000537529 SSR1P43307 286 aaKnown RBP16.62■□□□□ 0.25
MKS1-204ENST00000537529 KCNJ1P48048 391 aa16.62■□□□□ 0.25
MKS1-204ENST00000537529 TAS2R40P59535 323 aa16.62■□□□□ 0.25
MKS1-204ENST00000537529 IFFO1Q0D2I5 559 aa16.62■□□□□ 0.25
MKS1-204ENST00000537529 ZNF667Q5HYK9 610 aa16.62■□□□□ 0.25
MKS1-204ENST00000537529 ARFGAP2Q8N6H7 521 aa16.62■□□□□ 0.25
MKS1-204ENST00000537529 EXD1Q8NHP7 514 aa16.62■□□□□ 0.25
MKS1-204ENST00000537529 FDXACB1Q9BRP7 624 aaPredicted RBP16.62■□□□□ 0.25
MKS1-204ENST00000537529 PDZD7Q9H5P4 517 aa16.62■□□□□ 0.25
MKS1-204ENST00000537529 NXF1Q9UBU9 619 aaKnown RBP16.62■□□□□ 0.25
MKS1-204ENST00000537529 FEZ2Q9UHY8 353 aaPredicted RBP16.62■□□□□ 0.25
MKS1-204ENST00000537529 USTQ9Y2C2 406 aa16.62■□□□□ 0.25
MKS1-204ENST00000537529 TMEM191CA6NGB0 347 aa16.61■□□□□ 0.25
MKS1-204ENST00000537529 MED7O43513 233 aa16.61■□□□□ 0.25
MKS1-204ENST00000537529 PPFIA4O75335 1185 aa16.61■□□□□ 0.25
MKS1-204ENST00000537529 NFICP08651 508 aa16.61■□□□□ 0.25
MKS1-204ENST00000537529 LACTBP83111 547 aaPredicted RBP16.61■□□□□ 0.25
MKS1-204ENST00000537529 KRT17Q04695 432 aa16.61■□□□□ 0.25
MKS1-204ENST00000537529 CALCOCO2Q13137 446 aa16.61■□□□□ 0.25
MKS1-204ENST00000537529 AMHR2Q16671 573 aa16.61■□□□□ 0.25
MKS1-204ENST00000537529 TMEM192Q8IY95 271 aa16.61■□□□□ 0.25
MKS1-204ENST00000537529 ART4Q93070 314 aa16.61■□□□□ 0.25
MKS1-204ENST00000537529 BCO2Q9BYV7 579 aa16.61■□□□□ 0.25
MKS1-204ENST00000537529 DCLK3Q9C098 648 aa16.61■□□□□ 0.25
MKS1-204ENST00000537529 KATNBL1Q9H079 304 aa16.61■□□□□ 0.25
MKS1-204ENST00000537529 PABPC3Q9H361 631 aaKnown RBP16.61■□□□□ 0.25
MKS1-204ENST00000537529 POLIQ9UNA4 740 aa16.61■□□□□ 0.25
MKS1-204ENST00000537529 LACTBL1A8MY62 500 aa16.61■□□□□ 0.25
MKS1-204ENST00000537529 GRIN2DO15399 1336 aa16.61■□□□□ 0.25
MKS1-204ENST00000537529 GAS8O95995 478 aa16.61■□□□□ 0.25
MKS1-204ENST00000537529 NUDT17P0C025 328 aa16.61■□□□□ 0.25
MKS1-204ENST00000537529 RALAP11233 206 aa16.61■□□□□ 0.25
MKS1-204ENST00000537529 ATP1A2P50993 1020 aa16.61■□□□□ 0.25
MKS1-204ENST00000537529 SNX1Q13596 522 aa16.61■□□□□ 0.25
MKS1-204ENST00000537529 SLMAPQ14BN4 828 aa16.61■□□□□ 0.25
MKS1-204ENST00000537529 LLGL1Q15334 1064 aa16.61■□□□□ 0.25
MKS1-204ENST00000537529 KRT71Q3SY84 523 aa16.61■□□□□ 0.25
MKS1-204ENST00000537529 DENND2CQ68D51 928 aa16.61■□□□□ 0.25
MKS1-204ENST00000537529 MTHFD1LQ6UB35 978 aa16.61■□□□□ 0.25
MKS1-204ENST00000537529 HOOK3Q86VS8 718 aa16.61■□□□□ 0.25
MKS1-204ENST00000537529 ERICH1Q86X53 443 aa16.61■□□□□ 0.25
MKS1-204ENST00000537529 BRI3BPQ8WY22 251 aa16.61■□□□□ 0.25
MKS1-204ENST00000537529 TFAP2BQ92481 460 aa16.61■□□□□ 0.25
MKS1-204ENST00000537529 C16orf70Q9BSU1 422 aa16.61■□□□□ 0.25
MKS1-204ENST00000537529 WHRNQ9P202 907 aa16.61■□□□□ 0.25
MKS1-204ENST00000537529 SIX4Q9UIU6 781 aa16.61■□□□□ 0.25
MKS1-204ENST00000537529 PLXNA1Q9UIW2 1896 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms