RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 SLC28A3Q9HAS3 691 aa25.98■■□□□ 1.75
HMGA2-208ENST00000537429 FBXL5Q9UKA1 691 aa25.98■■□□□ 1.75
HMGA2-208ENST00000537429 CHD9Q3L8U1 2897 aa25.98■■□□□ 1.75
HMGA2-208ENST00000537429 C5orf67F2Z3F1 127 aa25.98■■□□□ 1.75
HMGA2-208ENST00000537429 HUS1O60921 280 aa25.98■■□□□ 1.75
HMGA2-208ENST00000537429 FGF18O76093 207 aa25.98■■□□□ 1.75
HMGA2-208ENST00000537429 TBXAS1P24557 533 aaPredicted RBP25.98■■□□□ 1.75
HMGA2-208ENST00000537429 DNAJB2P25686 324 aa25.98■■□□□ 1.75
HMGA2-208ENST00000537429 PLCB3Q01970 1234 aa25.98■■□□□ 1.75
HMGA2-208ENST00000537429 ELAVL2Q12926 359 aaKnown RBP25.98■■□□□ 1.75
HMGA2-208ENST00000537429 LRIT3Q3SXY7 679 aa25.98■■□□□ 1.75
HMGA2-208ENST00000537429 SPECC1LQ69YQ0 1117 aa25.98■■□□□ 1.75
HMGA2-208ENST00000537429 TOP6BLQ8N6T0 577 aa25.98■■□□□ 1.75
HMGA2-208ENST00000537429 KAT5Q92993 513 aa25.98■■□□□ 1.75
HMGA2-208ENST00000537429 FAM81BQ96LP2 452 aa25.98■■□□□ 1.75
HMGA2-208ENST00000537429 KREMEN1Q96MU8 473 aa25.98■■□□□ 1.75
HMGA2-208ENST00000537429 TGS1Q96RS0 853 aaKnown RBP25.98■■□□□ 1.75
HMGA2-208ENST00000537429 ARID3AQ99856 593 aa25.98■■□□□ 1.75
HMGA2-208ENST00000537429 NAA15Q9BXJ9 866 aaKnown RBP25.98■■□□□ 1.75
HMGA2-208ENST00000537429 L1RE1Q9UN81 338 aa25.98■■□□□ 1.75
HMGA2-208ENST00000537429 ERVK-21P61565 698 aa25.97■■□□□ 1.75
HMGA2-208ENST00000537429 FIGNQ5HY92 759 aa25.97■■□□□ 1.75
HMGA2-208ENST00000537429 IQCEQ6IPM2 695 aa25.97■■□□□ 1.75
HMGA2-208ENST00000537429 SCARA5Q6ZMJ2 495 aa25.97■■□□□ 1.75
HMGA2-208ENST00000537429 KLHL23Q8NBE8 558 aa25.97■■□□□ 1.75
HMGA2-208ENST00000537429 APPL2Q8NEU8 664 aa25.97■■□□□ 1.75
HMGA2-208ENST00000537429 TIFAQ96CG3 184 aa25.97■■□□□ 1.75
HMGA2-208ENST00000537429 VN1R3Q9BXE9 311 aa25.97■■□□□ 1.75
HMGA2-208ENST00000537429 SDCBP2Q9H190 292 aa25.97■■□□□ 1.75
HMGA2-208ENST00000537429 SMYD3Q9H7B4 428 aa25.97■■□□□ 1.75
HMGA2-208ENST00000537429 CYP3A43Q9HB55 503 aa25.97■■□□□ 1.75
HMGA2-208ENST00000537429 DNAJC12Q9UKB3 198 aa25.97■■□□□ 1.75
HMGA2-208ENST00000537429 AJAP1Q9UKB5 411 aaPredicted RBP25.97■■□□□ 1.75
HMGA2-208ENST00000537429 PCDHB8Q9UN66 801 aa25.97■■□□□ 1.75
HMGA2-208ENST00000537429 DAAM1Q9Y4D1 1078 aa25.97■■□□□ 1.75
HMGA2-208ENST00000537429 FHOD1Q9Y613 1164 aa25.97■■□□□ 1.75
HMGA2-208ENST00000537429 CYP11A1P05108 521 aa25.96■■□□□ 1.75
HMGA2-208ENST00000537429 RB1P06400 928 aa25.96■■□□□ 1.75
HMGA2-208ENST00000537429 WEE2P0C1S8 567 aa25.96■■□□□ 1.75
HMGA2-208ENST00000537429 FAM163BP0C2L3 166 aa25.96■■□□□ 1.75
HMGA2-208ENST00000537429 ODC1P11926 461 aa25.96■■□□□ 1.75
HMGA2-208ENST00000537429 TRIM21P19474 475 aaKnown RBP25.96■■□□□ 1.75
HMGA2-208ENST00000537429 RFX1P22670 979 aa25.96■■□□□ 1.75
HMGA2-208ENST00000537429 CDH8P55286 799 aa25.96■■□□□ 1.75
HMGA2-208ENST00000537429 FAM171A1Q5VUB5 890 aa25.96■■□□□ 1.75
HMGA2-208ENST00000537429 ENOSF1Q7L5Y1 443 aa25.96■■□□□ 1.75
HMGA2-208ENST00000537429 PDCL2Q8N4E4 241 aa25.96■■□□□ 1.75
HMGA2-208ENST00000537429 JAKMIP2Q96AA8 810 aa25.96■■□□□ 1.75
HMGA2-208ENST00000537429 NUP58Q9BVL2 599 aa25.96■■□□□ 1.75
HMGA2-208ENST00000537429 TTYH3Q9C0H2 523 aa25.96■■□□□ 1.75
HMGA2-208ENST00000537429 CHD7Q9P2D1 2997 aa25.96■■□□□ 1.75
HMGA2-208ENST00000537429 ARHGEF37A1IGU5 675 aa25.95■■□□□ 1.74
HMGA2-208ENST00000537429 SYN3O14994 580 aa25.95■■□□□ 1.74
HMGA2-208ENST00000537429 TACC1O75410 805 aa25.95■■□□□ 1.74
HMGA2-208ENST00000537429 FGFR3P22607 806 aa25.95■■□□□ 1.74
HMGA2-208ENST00000537429 MFAP3P55082 362 aa25.95■■□□□ 1.74
HMGA2-208ENST00000537429 POLR2FP61218 127 aaKnown RBP25.95■■□□□ 1.74
HMGA2-208ENST00000537429 KRT17Q04695 432 aa25.95■■□□□ 1.74
HMGA2-208ENST00000537429 WSCD1Q658N2 575 aa25.95■■□□□ 1.74
HMGA2-208ENST00000537429 TAS1R1Q7RTX1 841 aa25.95■■□□□ 1.74
HMGA2-208ENST00000537429 DDX53Q86TM3 631 aaKnown RBP25.95■■□□□ 1.74
HMGA2-208ENST00000537429 TIMM13Q9Y5L4 95 aaPredicted RBP25.95■■□□□ 1.74
HMGA2-208ENST00000537429 TYMPP19971 482 aa25.94■■□□□ 1.74
HMGA2-208ENST00000537429 TKTP29401 623 aaKnown RBP25.94■■□□□ 1.74
HMGA2-208ENST00000537429 CDC25BP30305 580 aa25.94■■□□□ 1.74
HMGA2-208ENST00000537429 RAP1GAPP47736 663 aa25.94■■□□□ 1.74
HMGA2-208ENST00000537429 TMEM86AQ8N2M4 240 aa25.94■■□□□ 1.74
HMGA2-208ENST00000537429 KBTBD7Q8WVZ9 684 aa25.94■■□□□ 1.74
HMGA2-208ENST00000537429 MRPL45Q9BRJ2 306 aaKnown RBP25.94■■□□□ 1.74
HMGA2-208ENST00000537429 FAM124BQ9H5Z6 455 aaPredicted RBP25.94■■□□□ 1.74
HMGA2-208ENST00000537429 CERS4Q9HA82 394 aa25.94■■□□□ 1.74
HMGA2-208ENST00000537429 CEP72Q9P209 647 aa25.94■■□□□ 1.74
HMGA2-208ENST00000537429 STK39Q9UEW8 545 aa25.94■■□□□ 1.74
HMGA2-208ENST00000537429 DSEQ9UL01 958 aa25.94■■□□□ 1.74
HMGA2-208ENST00000537429 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25.94■■□□□ 1.74
HMGA2-208ENST00000537429 SOD2P04179 222 aa25.93■■□□□ 1.74
HMGA2-208ENST00000537429 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.93■■□□□ 1.74
HMGA2-208ENST00000537429 ADGRF2Q8IZF7 708 aa25.93■■□□□ 1.74
HMGA2-208ENST00000537429 UBR7Q8N806 425 aa25.93■■□□□ 1.74
HMGA2-208ENST00000537429 IQCDQ96DY2 449 aa25.93■■□□□ 1.74
HMGA2-208ENST00000537429 EDEM3Q9BZQ6 932 aa25.93■■□□□ 1.74
HMGA2-208ENST00000537429 NLRC4Q9NPP4 1024 aa25.93■■□□□ 1.74
HMGA2-208ENST00000537429 CHST7Q9NS84 486 aa25.93■■□□□ 1.74
HMGA2-208ENST00000537429 CISHQ9NSE2 258 aa25.93■■□□□ 1.74
HMGA2-208ENST00000537429 VWA8A3KMH1 1905 aa25.93■■□□□ 1.74
HMGA2-208ENST00000537429 PLXNA4Q9HCM2 1894 aa25.93■■□□□ 1.74
HMGA2-208ENST00000537429 TSC2P49815 1807 aa25.93■■□□□ 1.74
HMGA2-208ENST00000537429 GABRDO14764 452 aa25.93■■□□□ 1.74
HMGA2-208ENST00000537429 ACO1P21399 889 aaKnown RBP25.93■■□□□ 1.74
HMGA2-208ENST00000537429 WARSP23381 471 aaKnown RBP25.93■■□□□ 1.74
HMGA2-208ENST00000537429 ARHGAP44Q17R89 818 aa25.93■■□□□ 1.74
HMGA2-208ENST00000537429 USP41Q3LFD5 358 aa25.93■■□□□ 1.74
HMGA2-208ENST00000537429 TMC6Q7Z403 805 aa25.93■■□□□ 1.74
HMGA2-208ENST00000537429 SPATA18Q8TC71 538 aa25.93■■□□□ 1.74
HMGA2-208ENST00000537429 STK33Q9BYT3 514 aa25.93■■□□□ 1.74
HMGA2-208ENST00000537429 GPR88Q9GZN0 384 aa25.93■■□□□ 1.74
HMGA2-208ENST00000537429 LZTS1Q9Y250 596 aa25.93■■□□□ 1.74
HMGA2-208ENST00000537429 GYPCP04921 128 aa25.92■■□□□ 1.74
HMGA2-208ENST00000537429 INCA1Q0VD86 236 aa25.92■■□□□ 1.74
HMGA2-208ENST00000537429 RAPGEF1Q13905 1077 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms