RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 PCDHGA8Q9Y5G5 932 aa6.9□□□□□ -1.3
CCDC7-208ENST00000537047 PCDHGA7Q9Y5G6 932 aa6.9□□□□□ -1.3
CCDC7-208ENST00000537047 PCDHGA6Q9Y5G7 932 aa6.9□□□□□ -1.3
CCDC7-208ENST00000537047 PCDHGA3Q9Y5H0 932 aa6.9□□□□□ -1.3
CCDC7-208ENST00000537047 WDR27A2RRH5 827 aa6.89□□□□□ -1.31
CCDC7-208ENST00000537047 HTRA2O43464 458 aaPredicted RBP6.89□□□□□ -1.31
CCDC7-208ENST00000537047 CELA2AP08217 269 aa6.89□□□□□ -1.31
CCDC7-208ENST00000537047 NBPF8Q3BBV2 869 aa6.89□□□□□ -1.31
CCDC7-208ENST00000537047 TAPT1Q6NXT6 567 aa6.89□□□□□ -1.31
CCDC7-208ENST00000537047 SLC30A10Q6XR72 485 aa6.89□□□□□ -1.31
CCDC7-208ENST00000537047 MICALCLQ6ZW33 695 aa6.89□□□□□ -1.31
CCDC7-208ENST00000537047 C1orf162Q8NEQ5 155 aaPredicted RBP6.89□□□□□ -1.31
CCDC7-208ENST00000537047 HASPINQ8TF76 798 aa6.89□□□□□ -1.31
CCDC7-208ENST00000537047 USP35Q9P2H5 1018 aa6.89□□□□□ -1.31
CCDC7-208ENST00000537047 TMA7Q9Y2S6 64 aaKnown RBP6.89□□□□□ -1.31
CCDC7-208ENST00000537047 ADGRA2Q96PE1 1338 aa6.88□□□□□ -1.31
CCDC7-208ENST00000537047 ORC4O43929 436 aa6.88□□□□□ -1.31
CCDC7-208ENST00000537047 TLE1Q04724 770 aa6.88□□□□□ -1.31
CCDC7-208ENST00000537047 B3GALNT2Q8NCR0 500 aa6.88□□□□□ -1.31
CCDC7-208ENST00000537047 HDAC10Q969S8 669 aa6.88□□□□□ -1.31
CCDC7-208ENST00000537047 CLPTM1LQ96KA5 538 aa6.88□□□□□ -1.31
CCDC7-208ENST00000537047 HAPLN3Q96S86 360 aa6.88□□□□□ -1.31
CCDC7-208ENST00000537047 C1QTNF7Q9BXJ2 289 aa6.88□□□□□ -1.31
CCDC7-208ENST00000537047 SAP30BPQ9UHR5 308 aaKnown RBP6.88□□□□□ -1.31
CCDC7-208ENST00000537047 CCDC154A6NI56 674 aa6.87□□□□□ -1.31
CCDC7-208ENST00000537047 TFF2Q03403 129 aa6.87□□□□□ -1.31
CCDC7-208ENST00000537047 TMEM119Q4V9L6 283 aa6.87□□□□□ -1.31
CCDC7-208ENST00000537047 FCRLBQ6BAA4 426 aa6.87□□□□□ -1.31
CCDC7-208ENST00000537047 TRIB1Q96RU8 372 aa6.87□□□□□ -1.31
CCDC7-208ENST00000537047 SMOC2Q9H3U7 446 aa6.87□□□□□ -1.31
CCDC7-208ENST00000537047 ZNF70Q9UC06 446 aaPredicted RBP6.87□□□□□ -1.31
CCDC7-208ENST00000537047 SERPINB13Q9UIV8 391 aa6.87□□□□□ -1.31
CCDC7-208ENST00000537047 NEU2Q9Y3R4 380 aa6.87□□□□□ -1.31
CCDC7-208ENST00000537047 WNT6Q9Y6F9 365 aa6.87□□□□□ -1.31
CCDC7-208ENST00000537047 LPOP22079 712 aaPredicted RBP6.86□□□□□ -1.31
CCDC7-208ENST00000537047 NPTX2P47972 431 aa6.86□□□□□ -1.31
CCDC7-208ENST00000537047 ZNF782Q6ZMW2 699 aaPredicted RBP6.86□□□□□ -1.31
CCDC7-208ENST00000537047 DDX42Q86XP3 938 aaKnown RBP eCLIP6.86□□□□□ -1.31
CCDC7-208ENST00000537047 CAMKK1Q8N5S9 505 aa6.86□□□□□ -1.31
CCDC7-208ENST00000537047 VRK1Q99986 396 aaPredicted RBP6.86□□□□□ -1.31
CCDC7-208ENST00000537047 MKS1Q9NXB0 559 aa6.86□□□□□ -1.31
CCDC7-208ENST00000537047 SLC5A4Q9NY91 659 aa6.86□□□□□ -1.31
CCDC7-208ENST00000537047 DKK3Q9UBP4 350 aa6.86□□□□□ -1.31
CCDC7-208ENST00000537047 NR2E3Q9Y5X4 410 aa6.86□□□□□ -1.31
CCDC7-208ENST00000537047 PRKCGP05129 697 aa6.85□□□□□ -1.31
CCDC7-208ENST00000537047 HLXQ14774 488 aaPredicted RBP6.85□□□□□ -1.31
CCDC7-208ENST00000537047 ABCB5Q2M3G0 1257 aa6.85□□□□□ -1.31
CCDC7-208ENST00000537047 GADL1Q6ZQY3 521 aa6.85□□□□□ -1.31
CCDC7-208ENST00000537047 PTF1AQ7RTS3 328 aa6.85□□□□□ -1.31
CCDC7-208ENST00000537047 FAM9AQ8IZU1 332 aaPredicted RBP6.85□□□□□ -1.31
CCDC7-208ENST00000537047 RFKQ969G6 155 aa6.85□□□□□ -1.31
CCDC7-208ENST00000537047 FAXDC2Q96IV6 333 aa6.85□□□□□ -1.31
CCDC7-208ENST00000537047 KLC4Q9NSK0 619 aa6.85□□□□□ -1.31
CCDC7-208ENST00000537047 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.85□□□□□ -1.31
CCDC7-208ENST00000537047 SGTAO43765 313 aa6.84□□□□□ -1.31
CCDC7-208ENST00000537047 NR2F6P10588 404 aa6.84□□□□□ -1.31
CCDC7-208ENST00000537047 PSMC1P62191 440 aaKnown RBP6.84□□□□□ -1.31
CCDC7-208ENST00000537047 KIF23Q02241 960 aaPredicted RBP6.84□□□□□ -1.31
CCDC7-208ENST00000537047 PIGFQ07326 219 aa6.84□□□□□ -1.31
CCDC7-208ENST00000537047 ZNF425Q6IV72 752 aa6.84□□□□□ -1.31
CCDC7-208ENST00000537047 POC1BQ8TC44 478 aa6.84□□□□□ -1.31
CCDC7-208ENST00000537047 SSH1Q8WYL5 1049 aa6.84□□□□□ -1.31
CCDC7-208ENST00000537047 SMOQ99835 787 aa6.84□□□□□ -1.31
CCDC7-208ENST00000537047 SERGEFQ9UGK8 458 aa6.84□□□□□ -1.31
CCDC7-208ENST00000537047 A0A0B4J269 797 aa6.83□□□□□ -1.32
CCDC7-208ENST00000537047 LRRC14BA6NHZ5 514 aa6.83□□□□□ -1.32
CCDC7-208ENST00000537047 F5H697 171 aa6.83□□□□□ -1.32
CCDC7-208ENST00000537047 F2RL2O00254 374 aa6.83□□□□□ -1.32
CCDC7-208ENST00000537047 XPOTO43592 962 aaKnown RBP6.83□□□□□ -1.32
CCDC7-208ENST00000537047 CHRM3P20309 590 aa6.83□□□□□ -1.32
CCDC7-208ENST00000537047 NXPH1P58417 271 aa6.83□□□□□ -1.32
CCDC7-208ENST00000537047 POU6F2P78424 691 aaPredicted RBP6.83□□□□□ -1.32
CCDC7-208ENST00000537047 ITIH3Q06033 890 aa6.83□□□□□ -1.32
CCDC7-208ENST00000537047 TUBB3Q13509 450 aa6.83□□□□□ -1.32
CCDC7-208ENST00000537047 RAB39AQ14964 217 aa6.83□□□□□ -1.32
CCDC7-208ENST00000537047 PCBP2Q15366 365 aaKnown RBP eCLIP6.83□□□□□ -1.32
CCDC7-208ENST00000537047 SRSF7Q16629 238 aaKnown RBP eCLIP6.83□□□□□ -1.32
CCDC7-208ENST00000537047 KHDC1Q4VXA5 237 aaKnown RBP6.83□□□□□ -1.32
CCDC7-208ENST00000537047 CCDC93Q567U6 631 aa6.83□□□□□ -1.32
CCDC7-208ENST00000537047 VGLL2Q8N8G2 317 aa6.83□□□□□ -1.32
CCDC7-208ENST00000537047 COA7Q96BR5 231 aa6.83□□□□□ -1.32
CCDC7-208ENST00000537047 CCDC8Q9H0W5 538 aaPredicted RBP6.83□□□□□ -1.32
CCDC7-208ENST00000537047 PRSS29PA6NIE9 313 aa6.82□□□□□ -1.32
CCDC7-208ENST00000537047 FZD9O00144 591 aa6.82□□□□□ -1.32
CCDC7-208ENST00000537047 POLRMTO00411 1230 aaKnown RBP6.82□□□□□ -1.32
CCDC7-208ENST00000537047 URI1O94763 535 aaPredicted RBP6.82□□□□□ -1.32
CCDC7-208ENST00000537047 PHKA1P46020 1223 aa6.82□□□□□ -1.32
CCDC7-208ENST00000537047 SLC16A1P53985 500 aa6.82□□□□□ -1.32
CCDC7-208ENST00000537047 SNAPC2Q13487 334 aa6.82□□□□□ -1.32
CCDC7-208ENST00000537047 TPSD1Q9BZJ3 242 aa6.82□□□□□ -1.32
CCDC7-208ENST00000537047 ETAA1Q9NY74 926 aa6.82□□□□□ -1.32
CCDC7-208ENST00000537047 PADI4Q9UM07 663 aa6.82□□□□□ -1.32
CCDC7-208ENST00000537047 AGAP1Q9UPQ3 857 aa6.82□□□□□ -1.32
CCDC7-208ENST00000537047 KLHL33A6NCF5 533 aa6.81□□□□□ -1.32
CCDC7-208ENST00000537047 ZNF785A8K8V0 405 aa6.81□□□□□ -1.32
CCDC7-208ENST00000537047 NT5C1B-RDH14C9J2C7 533 aa6.81□□□□□ -1.32
CCDC7-208ENST00000537047 PROB1E7EW31 1015 aa6.81□□□□□ -1.32
CCDC7-208ENST00000537047 VPS4BO75351 444 aa6.81□□□□□ -1.32
CCDC7-208ENST00000537047 PDHA1P08559 390 aa6.81□□□□□ -1.32
CCDC7-208ENST00000537047 EBLN1P0CF75 366 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms