RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 MCPH1Q8NEM0 835 aa7.79□□□□□ -1.16
YBX3-206ENST00000536823 GPR152Q8TDT2 470 aa7.79□□□□□ -1.16
YBX3-206ENST00000536823 POF1BQ8WVV4 589 aa7.79□□□□□ -1.16
YBX3-206ENST00000536823 PPP2R3CQ969Q6 453 aa7.79□□□□□ -1.16
YBX3-206ENST00000536823 PABPC5Q96DU9 382 aaKnown RBP7.79□□□□□ -1.16
YBX3-206ENST00000536823 CCDC51Q96ER9 411 aa7.79□□□□□ -1.16
YBX3-206ENST00000536823 ZNF558Q96NG5 402 aa7.79□□□□□ -1.16
YBX3-206ENST00000536823 SLC38A3Q99624 504 aa7.79□□□□□ -1.16
YBX3-206ENST00000536823 MRPL9Q9BYD2 267 aaKnown RBP7.79□□□□□ -1.16
YBX3-206ENST00000536823 NFKBIZQ9BYH8 718 aa7.79□□□□□ -1.16
YBX3-206ENST00000536823 POLR3FQ9H1D9 316 aaPredicted RBP7.79□□□□□ -1.16
YBX3-206ENST00000536823 FAM105AQ9NUU6 356 aa7.79□□□□□ -1.16
YBX3-206ENST00000536823 SMC3Q9UQE7 1217 aa7.79□□□□□ -1.16
YBX3-206ENST00000536823 LZTS1Q9Y250 596 aa7.79□□□□□ -1.16
YBX3-206ENST00000536823 PCDHB6Q9Y5E3 794 aa7.79□□□□□ -1.16
YBX3-206ENST00000536823 A0A087WWV3 80 aa7.78□□□□□ -1.16
YBX3-206ENST00000536823 ARHGEF35A5YM69 484 aa7.78□□□□□ -1.16
YBX3-206ENST00000536823 H3BQV1 296 aa7.78□□□□□ -1.16
YBX3-206ENST00000536823 INO80B-WBP1J3KQ70 363 aa7.78□□□□□ -1.16
YBX3-206ENST00000536823 TSPAN1O60635 241 aa7.78□□□□□ -1.16
YBX3-206ENST00000536823 ERLIN2O94905 339 aa7.78□□□□□ -1.16
YBX3-206ENST00000536823 KIF4AO95239 1232 aa7.78□□□□□ -1.16
YBX3-206ENST00000536823 GLRA2P23416 452 aa7.78□□□□□ -1.16
YBX3-206ENST00000536823 AXLP30530 894 aa7.78□□□□□ -1.16
YBX3-206ENST00000536823 HOXA11P31270 313 aaPredicted RBP7.78□□□□□ -1.16
YBX3-206ENST00000536823 ADMP35318 185 aa7.78□□□□□ -1.16
YBX3-206ENST00000536823 CCT6AP40227 531 aaKnown RBP7.78□□□□□ -1.16
YBX3-206ENST00000536823 CUL4AQ13619 759 aa7.78□□□□□ -1.16
YBX3-206ENST00000536823 PLCL1Q15111 1095 aa7.78□□□□□ -1.16
YBX3-206ENST00000536823 RILPL1Q5EBL4 403 aa7.78□□□□□ -1.16
YBX3-206ENST00000536823 NOMO2Q5JPE7 1267 aa7.78□□□□□ -1.16
YBX3-206ENST00000536823 UBXN11Q5T124 520 aa7.78□□□□□ -1.16
YBX3-206ENST00000536823 CDCA2Q69YH5 1023 aaPredicted RBP7.78□□□□□ -1.16
YBX3-206ENST00000536823 KCNT2Q6UVM3 1135 aa7.78□□□□□ -1.16
YBX3-206ENST00000536823 GLB1LQ6UWU2 654 aa7.78□□□□□ -1.16
YBX3-206ENST00000536823 XKR5Q6UX68 686 aa7.78□□□□□ -1.16
YBX3-206ENST00000536823 MRPL10Q7Z7H8 261 aaKnown RBP7.78□□□□□ -1.16
YBX3-206ENST00000536823 ADGRD2Q7Z7M1 963 aa7.78□□□□□ -1.16
YBX3-206ENST00000536823 ZAR1Q86SH2 424 aa7.78□□□□□ -1.16
YBX3-206ENST00000536823 IGSF22Q8N9C0 903 aa7.78□□□□□ -1.16
YBX3-206ENST00000536823 LPPQ93052 612 aa7.78□□□□□ -1.16
YBX3-206ENST00000536823 NECAB3Q96P71 396 aaPredicted RBP7.78□□□□□ -1.16
YBX3-206ENST00000536823 BACH2Q9BYV9 841 aa7.78□□□□□ -1.16
YBX3-206ENST00000536823 RAB34Q9BZG1 259 aa7.78□□□□□ -1.16
YBX3-206ENST00000536823 GPRC5CQ9NQ84 441 aa7.78□□□□□ -1.16
YBX3-206ENST00000536823 TLR9Q9NR96 1032 aa7.78□□□□□ -1.16
YBX3-206ENST00000536823 CLDND1Q9NY35 253 aa7.78□□□□□ -1.16
YBX3-206ENST00000536823 SPG21Q9NZD8 308 aa7.78□□□□□ -1.16
YBX3-206ENST00000536823 LRWD1Q9UFC0 647 aa7.78□□□□□ -1.16
YBX3-206ENST00000536823 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.78□□□□□ -1.16
YBX3-206ENST00000536823 PCDHB2Q9Y5E7 798 aa7.78□□□□□ -1.16
YBX3-206ENST00000536823 CNTNAP2Q9UHC6 1331 aa7.78□□□□□ -1.16
YBX3-206ENST00000536823 FSD2A1L4K1 749 aa7.77□□□□□ -1.17
YBX3-206ENST00000536823 LRRIQ4A6NIV6 560 aa7.77□□□□□ -1.17
YBX3-206ENST00000536823 MEIS3P2A8K0S8 358 aa7.77□□□□□ -1.17
YBX3-206ENST00000536823 H3BQ06 376 aaPredicted RBP7.77□□□□□ -1.17
YBX3-206ENST00000536823 TBX10O75333 385 aa7.77□□□□□ -1.17
YBX3-206ENST00000536823 CYP11B2P19099 503 aa7.77□□□□□ -1.17
YBX3-206ENST00000536823 NCLP19338 710 aaKnown RBP7.77□□□□□ -1.17
YBX3-206ENST00000536823 GTF2F1P35269 517 aaKnown RBP eCLIP7.77□□□□□ -1.17
YBX3-206ENST00000536823 LTBRP36941 435 aa7.77□□□□□ -1.17
YBX3-206ENST00000536823 PBX3P40426 434 aa7.77□□□□□ -1.17
YBX3-206ENST00000536823 ATP2C1P98194 919 aaPredicted RBP7.77□□□□□ -1.17
YBX3-206ENST00000536823 PLCB3Q01970 1234 aa7.77□□□□□ -1.17
YBX3-206ENST00000536823 MBTD1Q05BQ5 628 aa7.77□□□□□ -1.17
YBX3-206ENST00000536823 PDIA5Q14554 519 aa7.77□□□□□ -1.17
YBX3-206ENST00000536823 PDE12Q6L8Q7 609 aaKnown RBP7.77□□□□□ -1.17
YBX3-206ENST00000536823 NOTUMQ6P988 496 aa7.77□□□□□ -1.17
YBX3-206ENST00000536823 AGMOQ6ZNB7 445 aa7.77□□□□□ -1.17
YBX3-206ENST00000536823 EP400NLQ6ZTU2 488 aa7.77□□□□□ -1.17
YBX3-206ENST00000536823 SLC39A11Q8N1S5 342 aa7.77□□□□□ -1.17
YBX3-206ENST00000536823 EFHBQ8N7U6 833 aa7.77□□□□□ -1.17
YBX3-206ENST00000536823 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.77□□□□□ -1.17
YBX3-206ENST00000536823 URGCPQ8TCY9 931 aa7.77□□□□□ -1.17
YBX3-206ENST00000536823 SNX29Q8TEQ0 813 aa7.77□□□□□ -1.17
YBX3-206ENST00000536823 MRPS27Q92552 414 aaKnown RBP7.77□□□□□ -1.17
YBX3-206ENST00000536823 PGBD4Q96DM1 585 aa7.77□□□□□ -1.17
YBX3-206ENST00000536823 CSRNP2Q9H175 543 aa7.77□□□□□ -1.17
YBX3-206ENST00000536823 RSAD1Q9HA92 442 aa7.77□□□□□ -1.17
YBX3-206ENST00000536823 TBC1D13Q9NVG8 400 aa7.77□□□□□ -1.17
YBX3-206ENST00000536823 ZC3H7BQ9UGR2 993 aaKnown RBP7.77□□□□□ -1.17
YBX3-206ENST00000536823 INPP5FQ9Y2H2 1132 aa7.77□□□□□ -1.17
YBX3-206ENST00000536823 PCDHGC5Q9Y5F6 944 aa7.77□□□□□ -1.17
YBX3-206ENST00000536823 NCANO14594 1321 aa7.77□□□□□ -1.17
YBX3-206ENST00000536823 ZDBF2Q9HCK1 2354 aa7.76□□□□□ -1.17
YBX3-206ENST00000536823 ZMYM2Q9UBW7 1377 aa7.76□□□□□ -1.17
YBX3-206ENST00000536823 FAM170BA6NMN3 283 aa7.76□□□□□ -1.17
YBX3-206ENST00000536823 PP2D1A8MPX8 630 aa7.76□□□□□ -1.17
YBX3-206ENST00000536823 INPPL1O15357 1258 aa7.76□□□□□ -1.17
YBX3-206ENST00000536823 LINC01565O15544 149 aa7.76□□□□□ -1.17
YBX3-206ENST00000536823 ZC3H11AO75152 810 aaKnown RBP eCLIP7.76□□□□□ -1.177e-6■■□□□ 13.7
YBX3-206ENST00000536823 OFD1O75665 1012 aa7.76□□□□□ -1.17
YBX3-206ENST00000536823 ARF4P18085 180 aaPredicted RBP7.76□□□□□ -1.17
YBX3-206ENST00000536823 NRIP1P48552 1158 aa7.76□□□□□ -1.17
YBX3-206ENST00000536823 NDUFV1P49821 464 aa7.76□□□□□ -1.17
YBX3-206ENST00000536823 BCAR1P56945 870 aa7.76□□□□□ -1.17
YBX3-206ENST00000536823 ERVFC1P60507 584 aa7.76□□□□□ -1.17
YBX3-206ENST00000536823 RNASELQ05823 741 aaKnown RBP7.76□□□□□ -1.17
YBX3-206ENST00000536823 NCBP1Q09161 790 aaKnown RBP7.76□□□□□ -1.17
YBX3-206ENST00000536823 ADAM15Q13444 863 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms