RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 RFX1P22670 979 aa12.34□□□□□ -0.43
CDCA3-206ENST00000536241 USP8P40818 1118 aa12.34□□□□□ -0.43
CDCA3-206ENST00000536241 STAT1P42224 750 aa12.34□□□□□ -0.43
CDCA3-206ENST00000536241 RABGGTBP53611 331 aa12.34□□□□□ -0.43
CDCA3-206ENST00000536241 SOWAHAQ2M3V2 549 aa12.34□□□□□ -0.43
CDCA3-206ENST00000536241 ENOSF1Q7L5Y1 443 aa12.34□□□□□ -0.43
CDCA3-206ENST00000536241 CNGA4Q8IV77 575 aa12.34□□□□□ -0.43
CDCA3-206ENST00000536241 SHC3Q92529 594 aa12.34□□□□□ -0.43
CDCA3-206ENST00000536241 MRPL45Q9BRJ2 306 aaKnown RBP12.34□□□□□ -0.43
CDCA3-206ENST00000536241 SMYD3Q9H7B4 428 aa12.34□□□□□ -0.43
CDCA3-206ENST00000536241 CYP3A43Q9HB55 503 aa12.34□□□□□ -0.43
CDCA3-206ENST00000536241 DAAM1Q9Y4D1 1078 aa12.34□□□□□ -0.43
CDCA3-206ENST00000536241 PCDHB4Q9Y5E5 795 aa12.34□□□□□ -0.43
CDCA3-206ENST00000536241 TIMM13Q9Y5L4 95 aaPredicted RBP12.34□□□□□ -0.43
CDCA3-206ENST00000536241 MRPL42Q9Y6G3 142 aaKnown RBP12.34□□□□□ -0.43
CDCA3-206ENST00000536241 F8VZ95 297 aa12.33□□□□□ -0.44
CDCA3-206ENST00000536241 HUS1O60921 280 aa12.33□□□□□ -0.44
CDCA3-206ENST00000536241 GFPT2O94808 682 aa12.33□□□□□ -0.44
CDCA3-206ENST00000536241 SOX5P35711 763 aa12.33□□□□□ -0.44
CDCA3-206ENST00000536241 AARSP49588 968 aaKnown RBP eCLIP12.33□□□□□ -0.44
CDCA3-206ENST00000536241 GSDMDP57764 484 aa12.33□□□□□ -0.44
CDCA3-206ENST00000536241 ARID5AQ03989 594 aa12.33□□□□□ -0.44
CDCA3-206ENST00000536241 TSR1Q2NL82 804 aaKnown RBP12.33□□□□□ -0.44
CDCA3-206ENST00000536241 ZNF394Q53GI3 561 aa12.33□□□□□ -0.44
CDCA3-206ENST00000536241 SFMBT2Q5VUG0 894 aa12.33□□□□□ -0.44
CDCA3-206ENST00000536241 WSCD1Q658N2 575 aa12.33□□□□□ -0.44
CDCA3-206ENST00000536241 E4F1Q66K89 784 aaPredicted RBP12.33□□□□□ -0.44
CDCA3-206ENST00000536241 TMEM270Q6UE05 265 aa12.33□□□□□ -0.44
CDCA3-206ENST00000536241 KCNT2Q6UVM3 1135 aa12.33□□□□□ -0.44
CDCA3-206ENST00000536241 DPH6Q7L8W6 267 aa12.33□□□□□ -0.44
CDCA3-206ENST00000536241 FIBCD1Q8N539 461 aa12.33□□□□□ -0.44
CDCA3-206ENST00000536241 UBR7Q8N806 425 aa12.33□□□□□ -0.44
CDCA3-206ENST00000536241 JAKMIP2Q96AA8 810 aa12.33□□□□□ -0.44
CDCA3-206ENST00000536241 CISHQ9NSE2 258 aa12.33□□□□□ -0.44
CDCA3-206ENST00000536241 ABHD10Q9NUJ1 306 aa12.33□□□□□ -0.44
CDCA3-206ENST00000536241 AIPL1Q9NZN9 384 aa12.33□□□□□ -0.44
CDCA3-206ENST00000536241 MYO6Q9UM54 1294 aa12.33□□□□□ -0.44
CDCA3-206ENST00000536241 LCHNA4D1U4 455 aa12.32□□□□□ -0.44
CDCA3-206ENST00000536241 TMEM189-UBE2V1I3L0A0 370 aa12.32□□□□□ -0.44
CDCA3-206ENST00000536241 CYP26A1O43174 497 aa12.32□□□□□ -0.44
CDCA3-206ENST00000536241 SKILP12757 684 aa12.32□□□□□ -0.44
CDCA3-206ENST00000536241 KRT5P13647 590 aa12.32□□□□□ -0.44
CDCA3-206ENST00000536241 MYOGP15173 224 aa12.32□□□□□ -0.44
CDCA3-206ENST00000536241 CLCN1P35523 988 aa12.32□□□□□ -0.44
CDCA3-206ENST00000536241 FAM109BQ6ICB4 259 aaPredicted RBP12.32□□□□□ -0.44
CDCA3-206ENST00000536241 WDR59Q6PJI9 974 aa12.32□□□□□ -0.44
CDCA3-206ENST00000536241 LIMS2Q7Z4I7 341 aa12.32□□□□□ -0.44
CDCA3-206ENST00000536241 IRF2BP2Q7Z5L9 587 aa12.32□□□□□ -0.44
CDCA3-206ENST00000536241 TMEM173Q86WV6 379 aaPredicted RBP12.32□□□□□ -0.44
CDCA3-206ENST00000536241 LRRC8AQ8IWT6 810 aa12.32□□□□□ -0.44
CDCA3-206ENST00000536241 FAM71AQ8IYT1 594 aa12.32□□□□□ -0.44
CDCA3-206ENST00000536241 APPL2Q8NEU8 664 aa12.32□□□□□ -0.44
CDCA3-206ENST00000536241 OR6B3Q8NGW1 331 aa12.32□□□□□ -0.44
CDCA3-206ENST00000536241 WHAMMQ8TF30 809 aa12.32□□□□□ -0.44
CDCA3-206ENST00000536241 SUSD3Q96L08 255 aa12.32□□□□□ -0.44
CDCA3-206ENST00000536241 DNAJC7Q99615 494 aa12.32□□□□□ -0.44
CDCA3-206ENST00000536241 GPR62Q9BZJ7 368 aa12.32□□□□□ -0.44
CDCA3-206ENST00000536241 NUCKS1Q9H1E3 243 aaKnown RBP12.32□□□□□ -0.44
CDCA3-206ENST00000536241 ACP6Q9NPH0 428 aa12.32□□□□□ -0.44
CDCA3-206ENST00000536241 MARCH5Q9NX47 278 aa12.32□□□□□ -0.44
CDCA3-206ENST00000536241 ADAM28Q9UKQ2 775 aa12.32□□□□□ -0.44
CDCA3-206ENST00000536241 L1RE1Q9UN81 338 aa12.32□□□□□ -0.44
CDCA3-206ENST00000536241 COL4A6Q14031 1691 aa12.32□□□□□ -0.44
CDCA3-206ENST00000536241 M0QZQ0 153 aa12.31□□□□□ -0.44
CDCA3-206ENST00000536241 TACC1O75410 805 aa12.31□□□□□ -0.44
CDCA3-206ENST00000536241 CALCAP01258 141 aa12.31□□□□□ -0.44
CDCA3-206ENST00000536241 PDGFRBP09619 1106 aa12.31□□□□□ -0.44
CDCA3-206ENST00000536241 PAX3P23760 479 aa12.31□□□□□ -0.44
CDCA3-206ENST00000536241 LMO2P25791 158 aa12.31□□□□□ -0.44
CDCA3-206ENST00000536241 HNRNPH3P31942 346 aaKnown RBP12.31□□□□□ -0.44
CDCA3-206ENST00000536241 GNL1P36915 607 aaPredicted RBP12.31□□□□□ -0.44
CDCA3-206ENST00000536241 NDST1P52848 882 aa12.31□□□□□ -0.44
CDCA3-206ENST00000536241 YWHAEP62258 255 aaKnown RBP12.31□□□□□ -0.44
CDCA3-206ENST00000536241 PDCL2Q8N4E4 241 aa12.31□□□□□ -0.44
CDCA3-206ENST00000536241 TOP6BLQ8N6T0 577 aa12.31□□□□□ -0.44
CDCA3-206ENST00000536241 COLGALT1Q8NBJ5 622 aa12.31□□□□□ -0.44
CDCA3-206ENST00000536241 BCL7CQ8WUZ0 217 aaPredicted RBP12.31□□□□□ -0.44
CDCA3-206ENST00000536241 KBTBD7Q8WVZ9 684 aa12.31□□□□□ -0.44
CDCA3-206ENST00000536241 SYN2Q92777 582 aaPredicted RBP12.31□□□□□ -0.44
CDCA3-206ENST00000536241 ZNF830Q96NB3 372 aaPredicted RBP12.31□□□□□ -0.44
CDCA3-206ENST00000536241 ZNF558Q96NG5 402 aa12.31□□□□□ -0.44
CDCA3-206ENST00000536241 PANX2Q96RD6 677 aa12.31□□□□□ -0.44
CDCA3-206ENST00000536241 CHP1Q99653 195 aa12.31□□□□□ -0.44
CDCA3-206ENST00000536241 ZNHIT6Q9NWK9 470 aaKnown RBP12.31□□□□□ -0.44
CDCA3-206ENST00000536241 BARX2Q9UMQ3 279 aaPredicted RBP12.31□□□□□ -0.44
CDCA3-206ENST00000536241 CNTN6Q9UQ52 1028 aa12.31□□□□□ -0.44
CDCA3-206ENST00000536241 NME7Q9Y5B8 376 aa12.31□□□□□ -0.44
CDCA3-206ENST00000536241 GABRDO14764 452 aa12.3□□□□□ -0.44
CDCA3-206ENST00000536241 HCRTO43612 131 aa12.3□□□□□ -0.44
CDCA3-206ENST00000536241 TRAPPC3O43617 180 aa12.3□□□□□ -0.44
CDCA3-206ENST00000536241 CILPO75339 1184 aa12.3□□□□□ -0.44
CDCA3-206ENST00000536241 FAM163BP0C2L3 166 aa12.3□□□□□ -0.44
CDCA3-206ENST00000536241 LINC00271P0C7V0 271 aa12.3□□□□□ -0.44
CDCA3-206ENST00000536241 FERP16591 822 aa12.3□□□□□ -0.44
CDCA3-206ENST00000536241 LAG3P18627 525 aa12.3□□□□□ -0.44
CDCA3-206ENST00000536241 DEKP35659 375 aaKnown RBP12.3□□□□□ -0.44
CDCA3-206ENST00000536241 RAD23BP54727 409 aa12.3□□□□□ -0.44
CDCA3-206ENST00000536241 ORC1Q13415 861 aa12.3□□□□□ -0.44
CDCA3-206ENST00000536241 ASIC2Q16515 512 aa12.3□□□□□ -0.44
CDCA3-206ENST00000536241 FAM171A1Q5VUB5 890 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms