RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 TAS2R40P59535 323 aa14.21□□□□□ -0.13
VPS33B-202ENST00000535906 C1QBPQ07021 282 aaKnown RBP14.21□□□□□ -0.13
VPS33B-202ENST00000535906 SCARA5Q6ZMJ2 495 aa14.21□□□□□ -0.13
VPS33B-202ENST00000535906 TADA2BQ86TJ2 420 aa14.21□□□□□ -0.13
VPS33B-202ENST00000535906 NLRP14Q86W24 1093 aa14.21□□□□□ -0.13
VPS33B-202ENST00000535906 TMEM130Q8N3G9 435 aa14.21□□□□□ -0.13
VPS33B-202ENST00000535906 PPP1R16BQ96T49 567 aa14.21□□□□□ -0.13
VPS33B-202ENST00000535906 CDT1Q9H211 546 aa14.21□□□□□ -0.13
VPS33B-202ENST00000535906 MRPL47Q9HD33 250 aaKnown RBP14.21□□□□□ -0.13
VPS33B-202ENST00000535906 PNMA3Q9UL41 463 aa14.21□□□□□ -0.13
VPS33B-202ENST00000535906 PLXNA1Q9UIW2 1896 aa14.21□□□□□ -0.13
VPS33B-202ENST00000535906 GPR25O00155 361 aa14.21□□□□□ -0.14
VPS33B-202ENST00000535906 PDHXO00330 501 aa14.21□□□□□ -0.14
VPS33B-202ENST00000535906 TLR3O15455 904 aaKnown RBP14.21□□□□□ -0.14
VPS33B-202ENST00000535906 B4GALT4O60513 344 aa14.21□□□□□ -0.14
VPS33B-202ENST00000535906 CXCL8P10145 99 aa14.21□□□□□ -0.14
VPS33B-202ENST00000535906 MMP8P22894 467 aa14.21□□□□□ -0.14
VPS33B-202ENST00000535906 RPL7AP62424 266 aaKnown RBP14.21□□□□□ -0.14
VPS33B-202ENST00000535906 MKRN3Q13064 507 aaKnown RBP14.21□□□□□ -0.14
VPS33B-202ENST00000535906 SGO2Q562F6 1265 aa14.21□□□□□ -0.14
VPS33B-202ENST00000535906 ZNF473Q8WTR7 871 aaKnown RBP14.21□□□□□ -0.14
VPS33B-202ENST00000535906 EPB41L4BQ9H329 900 aa14.21□□□□□ -0.14
VPS33B-202ENST00000535906 ZNF408Q9H9D4 720 aa14.21□□□□□ -0.14
VPS33B-202ENST00000535906 CHST7Q9NS84 486 aa14.21□□□□□ -0.14
VPS33B-202ENST00000535906 BCCIPQ9P287 314 aaKnown RBP eCLIP14.21□□□□□ -0.14
VPS33B-202ENST00000535906 TNFSF13BQ9Y275 285 aa14.21□□□□□ -0.14
VPS33B-202ENST00000535906 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.21□□□□□ -0.14
VPS33B-202ENST00000535906 ASAP2O43150 1006 aa14.2□□□□□ -0.14
VPS33B-202ENST00000535906 CPP00450 1065 aa14.2□□□□□ -0.14
VPS33B-202ENST00000535906 ASPAP45381 313 aa14.2□□□□□ -0.14
VPS33B-202ENST00000535906 PPP2R2AP63151 447 aa14.2□□□□□ -0.14
VPS33B-202ENST00000535906 SNX1Q13596 522 aa14.2□□□□□ -0.14
VPS33B-202ENST00000535906 LAMC2Q13753 1193 aa14.2□□□□□ -0.14
VPS33B-202ENST00000535906 ZNF699Q32M78 642 aa14.2□□□□□ -0.14
VPS33B-202ENST00000535906 KRT71Q3SY84 523 aa14.2□□□□□ -0.14
VPS33B-202ENST00000535906 MYCBPAPQ8TBZ2 947 aa14.2□□□□□ -0.14
VPS33B-202ENST00000535906 ATG4AQ8WYN0 398 aa14.2□□□□□ -0.14
VPS33B-202ENST00000535906 TFAP2BQ92481 460 aa14.2□□□□□ -0.14
VPS33B-202ENST00000535906 CCT8L2Q96SF2 557 aa14.2□□□□□ -0.14
VPS33B-202ENST00000535906 PARVAQ9NVD7 372 aa14.2□□□□□ -0.14
VPS33B-202ENST00000535906 SCINQ9Y6U3 715 aa14.2□□□□□ -0.14
VPS33B-202ENST00000535906 A0A087WZ62 844 aa14.2□□□□□ -0.14
VPS33B-202ENST00000535906 GLTPD2A6NH11 291 aa14.2□□□□□ -0.14
VPS33B-202ENST00000535906 FAM107AO95990 144 aa14.2□□□□□ -0.14
VPS33B-202ENST00000535906 GBP1P32455 592 aa14.2□□□□□ -0.14
VPS33B-202ENST00000535906 SEC24CP53992 1094 aa14.2□□□□□ -0.14
VPS33B-202ENST00000535906 ODF2Q5BJF6 829 aa14.2□□□□□ -0.14
VPS33B-202ENST00000535906 FEZF2Q8TBJ5 459 aa14.2□□□□□ -0.14
VPS33B-202ENST00000535906 AFG1LQ8WV93 481 aa14.2□□□□□ -0.14
VPS33B-202ENST00000535906 ANKRD36BP1Q96IX9 119 aa14.2□□□□□ -0.14
VPS33B-202ENST00000535906 MS4A4AQ96JQ5 239 aa14.2□□□□□ -0.14
VPS33B-202ENST00000535906 FDXACB1Q9BRP7 624 aaPredicted RBP14.2□□□□□ -0.14
VPS33B-202ENST00000535906 NFKBIZQ9BYH8 718 aa14.2□□□□□ -0.14
VPS33B-202ENST00000535906 NOVA2Q9UNW9 492 aaKnown RBP14.2□□□□□ -0.14
VPS33B-202ENST00000535906 USTQ9Y2C2 406 aa14.2□□□□□ -0.14
VPS33B-202ENST00000535906 MEFVO15553 781 aaPredicted RBP14.19□□□□□ -0.14
VPS33B-202ENST00000535906 ECEL1O95672 775 aa14.19□□□□□ -0.14
VPS33B-202ENST00000535906 TNNC2P02585 160 aa14.19□□□□□ -0.14
VPS33B-202ENST00000535906 NUDT17P0C025 328 aa14.19□□□□□ -0.14
VPS33B-202ENST00000535906 ZNF286BP0CG31 522 aa14.19□□□□□ -0.14
VPS33B-202ENST00000535906 ADCYAP1R1P41586 468 aa14.19□□□□□ -0.14
VPS33B-202ENST00000535906 IFFO1Q0D2I5 559 aa14.19□□□□□ -0.14
VPS33B-202ENST00000535906 ZNF484Q5JVG2 852 aa14.19□□□□□ -0.14
VPS33B-202ENST00000535906 RHOT1Q8IXI2 618 aa14.19□□□□□ -0.14
VPS33B-202ENST00000535906 WDTC1Q8N5D0 677 aa14.19□□□□□ -0.14
VPS33B-202ENST00000535906 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.19□□□□□ -0.14
VPS33B-202ENST00000535906 RUNDC3BQ96NL0 473 aa14.19□□□□□ -0.14
VPS33B-202ENST00000535906 HEMGNQ9BXL5 484 aa14.19□□□□□ -0.14
VPS33B-202ENST00000535906 PABPC3Q9H361 631 aaKnown RBP14.19□□□□□ -0.14
VPS33B-202ENST00000535906 RPF1Q9H9Y2 349 aaKnown RBP14.19□□□□□ -0.14
VPS33B-202ENST00000535906 NXF1Q9UBU9 619 aaKnown RBP14.19□□□□□ -0.14
VPS33B-202ENST00000535906 POLIQ9UNA4 740 aa14.19□□□□□ -0.14
VPS33B-202ENST00000535906 PASKQ96RG2 1323 aa14.19□□□□□ -0.14
VPS33B-202ENST00000535906 PLXNB2O15031 1838 aa14.19□□□□□ -0.14
VPS33B-202ENST00000535906 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.19□□□□□ -0.14
VPS33B-202ENST00000535906 BTBD19C9JJ37 291 aa14.19□□□□□ -0.14
VPS33B-202ENST00000535906 E7EVH7 732 aa14.19□□□□□ -0.14
VPS33B-202ENST00000535906 GH1P01241 217 aa14.19□□□□□ -0.14
VPS33B-202ENST00000535906 VTNP04004 478 aa14.19□□□□□ -0.14
VPS33B-202ENST00000535906 NFICP08651 508 aa14.19□□□□□ -0.14
VPS33B-202ENST00000535906 KRT19P08727 400 aa14.19□□□□□ -0.14
VPS33B-202ENST00000535906 RALAP11233 206 aa14.19□□□□□ -0.14
VPS33B-202ENST00000535906 PMS2P54278 862 aa14.19□□□□□ -0.14
VPS33B-202ENST00000535906 CCNA1P78396 465 aa14.19□□□□□ -0.14
VPS33B-202ENST00000535906 AMHR2Q16671 573 aa14.19□□□□□ -0.14
VPS33B-202ENST00000535906 MICALCLQ6ZW33 695 aa14.19□□□□□ -0.14
VPS33B-202ENST00000535906 ANKS1BQ7Z6G8 1248 aa14.19□□□□□ -0.14
VPS33B-202ENST00000535906 CCDC50Q8IVM0 306 aa14.19□□□□□ -0.14
VPS33B-202ENST00000535906 LINC01465Q8N7H1 131 aa14.19□□□□□ -0.14
VPS33B-202ENST00000535906 PPTC7Q8NI37 304 aa14.19□□□□□ -0.14
VPS33B-202ENST00000535906 SLCO2A1Q92959 643 aa14.19□□□□□ -0.14
VPS33B-202ENST00000535906 PRMT7Q9NVM4 692 aaPredicted RBP14.19□□□□□ -0.14
VPS33B-202ENST00000535906 PARP2Q9UGN5 583 aa14.19□□□□□ -0.14
VPS33B-202ENST00000535906 SIX4Q9UIU6 781 aa14.19□□□□□ -0.14
VPS33B-202ENST00000535906 R3HDM2Q9Y2K5 976 aaKnown RBP14.19□□□□□ -0.14
VPS33B-202ENST00000535906 TCRBV5S1A1TA0A578 114 aa14.18□□□□□ -0.14
VPS33B-202ENST00000535906 PSTPIP1O43586 416 aa14.18□□□□□ -0.14
VPS33B-202ENST00000535906 SHBGP04278 402 aa14.18□□□□□ -0.14
VPS33B-202ENST00000535906 TCF4P15884 667 aa14.18□□□□□ -0.14
VPS33B-202ENST00000535906 GJC1P36383 396 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms