RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 IGFLR1Q9H665 355 aa12.97□□□□□ -0.33
CHD4-203ENST00000535717 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.97□□□□□ -0.33
CHD4-203ENST00000535717 SAMSN1Q9NSI8 373 aaKnown RBP12.97□□□□□ -0.33
CHD4-203ENST00000535717 FNIP2Q9P278 1114 aa12.97□□□□□ -0.33
CHD4-203ENST00000535717 MTRRQ9UBK8 725 aa12.97□□□□□ -0.33
CHD4-203ENST00000535717 NFE2L3Q9Y4A8 694 aa12.97□□□□□ -0.33
CHD4-203ENST00000535717 LINC01565O15544 149 aa12.96□□□□□ -0.33
CHD4-203ENST00000535717 ADAM12O43184 909 aa12.96□□□□□ -0.33
CHD4-203ENST00000535717 TBC1D4O60343 1298 aa12.96□□□□□ -0.33
CHD4-203ENST00000535717 OAZ2O95190 189 aa12.96□□□□□ -0.33
CHD4-203ENST00000535717 TYMPP19971 482 aa12.96□□□□□ -0.33
CHD4-203ENST00000535717 ATICP31939 592 aa12.96□□□□□ -0.33
CHD4-203ENST00000535717 PIK3CAP42336 1068 aa12.96□□□□□ -0.33
CHD4-203ENST00000535717 MXI1P50539 228 aa12.96□□□□□ -0.33
CHD4-203ENST00000535717 RBM10P98175 930 aaKnown RBP12.96□□□□□ -0.33
CHD4-203ENST00000535717 CREMQ03060 361 aa12.96□□□□□ -0.33
CHD4-203ENST00000535717 COL19A1Q14993 1142 aa12.96□□□□□ -0.33
CHD4-203ENST00000535717 SOWAHAQ2M3V2 549 aa12.96□□□□□ -0.33
CHD4-203ENST00000535717 SGSM1Q2NKQ1 1148 aa12.96□□□□□ -0.33
CHD4-203ENST00000535717 ZNF699Q32M78 642 aa12.96□□□□□ -0.33
CHD4-203ENST00000535717 WDR72Q3MJ13 1102 aa12.96□□□□□ -0.33
CHD4-203ENST00000535717 HSP90AA4PQ58FG1 418 aa12.96□□□□□ -0.33
CHD4-203ENST00000535717 WSCD1Q658N2 575 aa12.96□□□□□ -0.33
CHD4-203ENST00000535717 LIMS2Q7Z4I7 341 aa12.96□□□□□ -0.33
CHD4-203ENST00000535717 CREBRFQ8IUR6 639 aa12.96□□□□□ -0.33
CHD4-203ENST00000535717 PDCL2Q8N4E4 241 aa12.96□□□□□ -0.33
CHD4-203ENST00000535717 VN1R2Q8NFZ6 395 aa12.96□□□□□ -0.33
CHD4-203ENST00000535717 SEMA4DQ92854 862 aa12.96□□□□□ -0.33
CHD4-203ENST00000535717 CDCA3Q99618 268 aaPredicted RBP12.96□□□□□ -0.33
CHD4-203ENST00000535717 VRTNQ9H8Y1 702 aa12.96□□□□□ -0.33
CHD4-203ENST00000535717 L1RE1Q9UN81 338 aa12.96□□□□□ -0.33
CHD4-203ENST00000535717 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.96□□□□□ -0.33
CHD4-203ENST00000535717 SNX9Q9Y5X1 595 aa12.96□□□□□ -0.33
CHD4-203ENST00000535717 BACE2Q9Y5Z0 518 aa12.96□□□□□ -0.33
CHD4-203ENST00000535717 XIRP2A4UGR9 3374 aa12.95□□□□□ -0.34
CHD4-203ENST00000535717 BRWD1Q9NSI6 2320 aa12.95□□□□□ -0.34
CHD4-203ENST00000535717 TSC2P49815 1807 aa12.95□□□□□ -0.34
CHD4-203ENST00000535717 ARHGEF37A1IGU5 675 aa12.95□□□□□ -0.34
CHD4-203ENST00000535717 H7C4K7 107 aa12.95□□□□□ -0.34
CHD4-203ENST00000535717 HUS1O60921 280 aa12.95□□□□□ -0.34
CHD4-203ENST00000535717 LRRN2O75325 713 aa12.95□□□□□ -0.34
CHD4-203ENST00000535717 ASS1P00966 412 aaKnown RBP12.95□□□□□ -0.34
CHD4-203ENST00000535717 ADH1AP07327 375 aa12.95□□□□□ -0.34
CHD4-203ENST00000535717 KLRC2P26717 231 aa12.95□□□□□ -0.34
CHD4-203ENST00000535717 OR1D2P34982 312 aa12.95□□□□□ -0.34
CHD4-203ENST00000535717 FMO5P49326 533 aa12.95□□□□□ -0.34
CHD4-203ENST00000535717 NDUFV1P49821 464 aa12.95□□□□□ -0.34
CHD4-203ENST00000535717 MYL5Q02045 173 aa12.95□□□□□ -0.34
CHD4-203ENST00000535717 YWHAHQ04917 246 aaPredicted RBP12.95□□□□□ -0.34
CHD4-203ENST00000535717 KCNH2Q12809 1159 aa12.95□□□□□ -0.34
CHD4-203ENST00000535717 ADAM15Q13444 863 aa12.95□□□□□ -0.34
CHD4-203ENST00000535717 KCNC3Q14003 757 aa12.95□□□□□ -0.34
CHD4-203ENST00000535717 NCAPHQ15003 741 aa12.95□□□□□ -0.34
CHD4-203ENST00000535717 CTXN3Q4LDR2 81 aa12.95□□□□□ -0.34
CHD4-203ENST00000535717 CDKAL1Q5VV42 579 aa12.95□□□□□ -0.34
CHD4-203ENST00000535717 OVOS1Q6IE37 1185 aa12.95□□□□□ -0.34
CHD4-203ENST00000535717 ZNF280DQ6N043 979 aa12.95□□□□□ -0.34
CHD4-203ENST00000535717 GLYCTKQ8IVS8 523 aa12.95□□□□□ -0.34
CHD4-203ENST00000535717 FAM114A1Q8IWE2 563 aa12.95□□□□□ -0.34
CHD4-203ENST00000535717 AOPEPQ8N6M6 819 aa12.95□□□□□ -0.34
CHD4-203ENST00000535717 TOP6BLQ8N6T0 577 aa12.95□□□□□ -0.34
CHD4-203ENST00000535717 EFHBQ8N7U6 833 aa12.95□□□□□ -0.34
CHD4-203ENST00000535717 SLC22A17Q8WUG5 538 aa12.95□□□□□ -0.34
CHD4-203ENST00000535717 TAF4BQ92750 862 aa12.95□□□□□ -0.34
CHD4-203ENST00000535717 BPIFA3Q9BQP9 254 aa12.95□□□□□ -0.34
CHD4-203ENST00000535717 RTP3Q9BQQ7 232 aa12.95□□□□□ -0.34
CHD4-203ENST00000535717 PI4K2AQ9BTU6 479 aa12.95□□□□□ -0.34
CHD4-203ENST00000535717 NAT10Q9H0A0 1025 aaKnown RBP12.95□□□□□ -0.34
CHD4-203ENST00000535717 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.95□□□□□ -0.34
CHD4-203ENST00000535717 FANCLQ9NW38 375 aa12.95□□□□□ -0.34
CHD4-203ENST00000535717 NXF1Q9UBU9 619 aaKnown RBP12.95□□□□□ -0.34
CHD4-203ENST00000535717 FBXL5Q9UKA1 691 aa12.95□□□□□ -0.34
CHD4-203ENST00000535717 DSEQ9UL01 958 aa12.95□□□□□ -0.34
CHD4-203ENST00000535717 POLIQ9UNA4 740 aa12.95□□□□□ -0.34
CHD4-203ENST00000535717 COQ4Q9Y3A0 265 aa12.95□□□□□ -0.34
CHD4-203ENST00000535717 CDY1Q9Y6F8 540 aa12.95□□□□□ -0.34
CHD4-203ENST00000535717 KCNJ18B7U540 433 aa12.94□□□□□ -0.34
CHD4-203ENST00000535717 PMM2O15305 246 aa12.94□□□□□ -0.34
CHD4-203ENST00000535717 GLP2RO95838 553 aa12.94□□□□□ -0.34
CHD4-203ENST00000535717 AFPP02771 609 aaKnown RBP12.94□□□□□ -0.34
CHD4-203ENST00000535717 MTIF2P46199 727 aaKnown RBP12.94□□□□□ -0.34
CHD4-203ENST00000535717 CLCN4P51793 760 aa12.94□□□□□ -0.34
CHD4-203ENST00000535717 TNNC1P63316 161 aa12.94□□□□□ -0.34
CHD4-203ENST00000535717 MYL7Q01449 175 aa12.94□□□□□ -0.34
CHD4-203ENST00000535717 KCNJ12Q14500 433 aa12.94□□□□□ -0.34
CHD4-203ENST00000535717 SKIV2LQ15477 1246 aaKnown RBP12.94□□□□□ -0.34
CHD4-203ENST00000535717 CTC1Q2NKJ3 1217 aa12.94□□□□□ -0.34
CHD4-203ENST00000535717 ZNF667Q5HYK9 610 aa12.94□□□□□ -0.34
CHD4-203ENST00000535717 SPOPLQ6IQ16 392 aa12.94□□□□□ -0.34
CHD4-203ENST00000535717 SLC8B1Q6J4K2 584 aa12.94□□□□□ -0.34
CHD4-203ENST00000535717 LLGL2Q6P1M3 1020 aa12.94□□□□□ -0.34
CHD4-203ENST00000535717 OSTM1Q86WC4 334 aa12.94□□□□□ -0.34
CHD4-203ENST00000535717 METTL23Q86XA0 190 aa12.94□□□□□ -0.34
CHD4-203ENST00000535717 PALB2Q86YC2 1186 aa12.94□□□□□ -0.34
CHD4-203ENST00000535717 FBXL13Q8NEE6 735 aa12.94□□□□□ -0.34
CHD4-203ENST00000535717 KBTBD7Q8WVZ9 684 aa12.94□□□□□ -0.34
CHD4-203ENST00000535717 MMS19Q96T76 1030 aa12.94□□□□□ -0.34
CHD4-203ENST00000535717 APOBEC3GQ9HC16 384 aaKnown RBP12.94□□□□□ -0.34
CHD4-203ENST00000535717 RAB20Q9NX57 234 aa12.94□□□□□ -0.34
CHD4-203ENST00000535717 MAGEC2Q9UBF1 373 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms