RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 Q8NA96 180 aa6.54□□□□□ -1.36
PRKDC-205ENST00000535375 MTFMTQ96DP5 389 aaKnown RBP6.54□□□□□ -1.36
PRKDC-205ENST00000535375 C1GALT1C1Q96EU7 318 aa6.54□□□□□ -1.36
PRKDC-205ENST00000535375 CDK5RAP3Q96JB5 506 aa6.54□□□□□ -1.36
PRKDC-205ENST00000535375 AIFM2Q9BRQ8 373 aa6.54□□□□□ -1.36
PRKDC-205ENST00000535375 C1orf43Q9BWL3 253 aa6.54□□□□□ -1.36
PRKDC-205ENST00000535375 RHOBTB2Q9BYZ6 727 aa6.54□□□□□ -1.36
PRKDC-205ENST00000535375 INTS13Q9NVM9 706 aa6.54□□□□□ -1.36
PRKDC-205ENST00000535375 LRIT1Q9P2V4 623 aa6.54□□□□□ -1.36
PRKDC-205ENST00000535375 ZNHIT2Q9UHR6 403 aa6.54□□□□□ -1.36
PRKDC-205ENST00000535375 ZDHHC8Q9ULC8 765 aa6.54□□□□□ -1.36
PRKDC-205ENST00000535375 AP1G1O43747 822 aa6.53□□□□□ -1.36
PRKDC-205ENST00000535375 ZFPL1O95159 310 aa6.53□□□□□ -1.36
PRKDC-205ENST00000535375 S100BP04271 92 aaPredicted RBP6.53□□□□□ -1.36
PRKDC-205ENST00000535375 RARBP10826 455 aa6.53□□□□□ -1.36
PRKDC-205ENST00000535375 TYRP14679 529 aa6.53□□□□□ -1.36
PRKDC-205ENST00000535375 HSPA6P17066 643 aa6.53□□□□□ -1.36
PRKDC-205ENST00000535375 BMP5P22003 454 aa6.53□□□□□ -1.36
PRKDC-205ENST00000535375 ANXA11P50995 505 aaKnown RBP6.53□□□□□ -1.36
PRKDC-205ENST00000535375 DYRK1AQ13627 763 aa6.53□□□□□ -1.36
PRKDC-205ENST00000535375 CD300EQ496F6 205 aaPredicted RBP6.53□□□□□ -1.36
PRKDC-205ENST00000535375 ATAT1Q5SQI0 421 aa6.53□□□□□ -1.36
PRKDC-205ENST00000535375 TAPT1Q6NXT6 567 aa6.53□□□□□ -1.36
PRKDC-205ENST00000535375 FAM90A1Q86YD7 464 aa6.53□□□□□ -1.36
PRKDC-205ENST00000535375 BRIX1Q8TDN6 353 aaKnown RBP6.53□□□□□ -1.36
PRKDC-205ENST00000535375 LRGUKQ96M69 825 aa6.53□□□□□ -1.36
PRKDC-205ENST00000535375 CNPPD1Q9BV87 410 aa6.53□□□□□ -1.36
PRKDC-205ENST00000535375 MRPL46Q9H2W6 279 aaKnown RBP6.53□□□□□ -1.36
PRKDC-205ENST00000535375 ZIM2Q9NZV7 527 aa6.53□□□□□ -1.36
PRKDC-205ENST00000535375 CTTNBP2NLQ9P2B4 639 aa6.53□□□□□ -1.36
PRKDC-205ENST00000535375 PCDHA1Q9Y5I3 950 aa6.53□□□□□ -1.36
PRKDC-205ENST00000535375 NR2E3Q9Y5X4 410 aa6.53□□□□□ -1.36
PRKDC-205ENST00000535375 PEX1O43933 1283 aa6.52□□□□□ -1.37
PRKDC-205ENST00000535375 SUN1O94901 812 aa6.52□□□□□ -1.37
PRKDC-205ENST00000535375 LMNAP02545 664 aaKnown RBP6.52□□□□□ -1.37
PRKDC-205ENST00000535375 CXCR5P32302 372 aa6.52□□□□□ -1.37
PRKDC-205ENST00000535375 MPLP40238 635 aa6.52□□□□□ -1.37
PRKDC-205ENST00000535375 FOXI1Q12951 378 aa6.52□□□□□ -1.37
PRKDC-205ENST00000535375 KIF22Q14807 665 aa6.52□□□□□ -1.37
PRKDC-205ENST00000535375 SF3B3Q15393 1217 aaKnown RBP6.52□□□□□ -1.37
PRKDC-205ENST00000535375 OLFML1Q6UWY5 402 aa6.52□□□□□ -1.37
PRKDC-205ENST00000535375 SLC30A10Q6XR72 485 aa6.52□□□□□ -1.37
PRKDC-205ENST00000535375 LNX2Q8N448 690 aa6.52□□□□□ -1.37
PRKDC-205ENST00000535375 SSH3Q8TE77 659 aa6.52□□□□□ -1.37
PRKDC-205ENST00000535375 SNX19Q92543 992 aa6.52□□□□□ -1.37
PRKDC-205ENST00000535375 DDX17Q92841 729 aaKnown RBP6.52□□□□□ -1.37
PRKDC-205ENST00000535375 SLC35A4Q96G79 324 aa6.52□□□□□ -1.37
PRKDC-205ENST00000535375 CAMKK2Q96RR4 588 aa6.52□□□□□ -1.37
PRKDC-205ENST00000535375 RIOX1Q9H6W3 641 aa6.52□□□□□ -1.37
PRKDC-205ENST00000535375 SARS2Q9NP81 518 aaKnown RBP6.52□□□□□ -1.37
PRKDC-205ENST00000535375 NMRK2Q9NPI5 230 aa6.52□□□□□ -1.37
PRKDC-205ENST00000535375 KCTD5Q9NXV2 234 aa6.52□□□□□ -1.37
PRKDC-205ENST00000535375 E7ENX8 843 aa6.51□□□□□ -1.37
PRKDC-205ENST00000535375 PPFIA2O75334 1257 aa6.51□□□□□ -1.37
PRKDC-205ENST00000535375 NUDT3O95989 172 aa6.51□□□□□ -1.37
PRKDC-205ENST00000535375 PLA2G5P39877 138 aa6.51□□□□□ -1.37
PRKDC-205ENST00000535375 IL12RB1P42701 662 aa6.51□□□□□ -1.37
PRKDC-205ENST00000535375 MRPS35P82673 323 aaKnown RBP6.51□□□□□ -1.37
PRKDC-205ENST00000535375 TAP2Q03519 686 aa6.51□□□□□ -1.37
PRKDC-205ENST00000535375 HABP2Q14520 560 aaPredicted RBP6.51□□□□□ -1.37
PRKDC-205ENST00000535375 ZNF267Q14586 743 aaPredicted RBP6.51□□□□□ -1.37
PRKDC-205ENST00000535375 PLS1Q14651 629 aa6.51□□□□□ -1.37
PRKDC-205ENST00000535375 STRIP1Q5VSL9 837 aa6.51□□□□□ -1.37
PRKDC-205ENST00000535375 MICALCLQ6ZW33 695 aa6.51□□□□□ -1.37
PRKDC-205ENST00000535375 CGRRF1Q99675 332 aa6.51□□□□□ -1.37
PRKDC-205ENST00000535375 RTFDC1Q9BY42 306 aaPredicted RBP6.51□□□□□ -1.37
PRKDC-205ENST00000535375 GPR35Q9HC97 309 aa6.51□□□□□ -1.37
PRKDC-205ENST00000535375 CNNM1Q9NRU3 951 aa6.51□□□□□ -1.37
PRKDC-205ENST00000535375 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.51□□□□□ -1.37
PRKDC-205ENST00000535375 STXBP5LQ9Y2K9 1186 aa6.51□□□□□ -1.37
PRKDC-205ENST00000535375 E9PLN8 166 aa6.5□□□□□ -1.37
PRKDC-205ENST00000535375 OVOL3O00110 214 aa6.5□□□□□ -1.37
PRKDC-205ENST00000535375 YY2O15391 372 aa6.5□□□□□ -1.37
PRKDC-205ENST00000535375 VPS4BO75351 444 aa6.5□□□□□ -1.37
PRKDC-205ENST00000535375 MATN4O95460 622 aa6.5□□□□□ -1.37
PRKDC-205ENST00000535375 AHSGP02765 367 aa6.5□□□□□ -1.37
PRKDC-205ENST00000535375 ALDH2P05091 517 aa6.5□□□□□ -1.37
PRKDC-205ENST00000535375 MC2RQ01718 297 aa6.5□□□□□ -1.37
PRKDC-205ENST00000535375 GTF2H3Q13889 308 aa6.5□□□□□ -1.37
PRKDC-205ENST00000535375 HLXQ14774 488 aaPredicted RBP6.5□□□□□ -1.37
PRKDC-205ENST00000535375 PLEKHG6Q3KR16 790 aa6.5□□□□□ -1.37
PRKDC-205ENST00000535375 TPH2Q8IWU9 490 aa6.5□□□□□ -1.37
PRKDC-205ENST00000535375 ANKRD13AQ8IZ07 590 aa6.5□□□□□ -1.37
PRKDC-205ENST00000535375 ADGRG5Q8IZF4 528 aa6.5□□□□□ -1.37
PRKDC-205ENST00000535375 TOR1AIP2Q8NFQ8 470 aa6.5□□□□□ -1.37
PRKDC-205ENST00000535375 CAGE1Q8TC20 777 aa6.5□□□□□ -1.37
PRKDC-205ENST00000535375 FBXL20Q96IG2 436 aa6.5□□□□□ -1.37
PRKDC-205ENST00000535375 AIFM3Q96NN9 605 aa6.5□□□□□ -1.37
PRKDC-205ENST00000535375 VKORC1Q9BQB6 163 aa6.5□□□□□ -1.37
PRKDC-205ENST00000535375 CDH19Q9H159 772 aa6.5□□□□□ -1.37
PRKDC-205ENST00000535375 SLC12A5Q9H2X9 1139 aa6.5□□□□□ -1.37
PRKDC-205ENST00000535375 ARMT1Q9H993 441 aa6.5□□□□□ -1.37
PRKDC-205ENST00000535375 VSX1Q9NZR4 365 aaPredicted RBP6.5□□□□□ -1.37
PRKDC-205ENST00000535375 F5H697 171 aa6.49□□□□□ -1.37
PRKDC-205ENST00000535375 KIAA0355O15063 1070 aa6.49□□□□□ -1.37
PRKDC-205ENST00000535375 ORC4O43929 436 aa6.49□□□□□ -1.37
PRKDC-205ENST00000535375 RFPL1O75677 317 aa6.49□□□□□ -1.37
PRKDC-205ENST00000535375 U2AF1L5P0DN76 240 aaPredicted RBP6.49□□□□□ -1.37
PRKDC-205ENST00000535375 SRGNP10124 158 aa6.49□□□□□ -1.37
PRKDC-205ENST00000535375 GATA3P23771 443 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms