RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 SOX4Q06945 474 aaPredicted RBP9.12□□□□□ -0.95
CLIP1-206ENST00000535290 PPP2R5CQ13362 524 aa9.12□□□□□ -0.95
CLIP1-206ENST00000535290 CTTNQ14247 550 aaKnown RBP9.12□□□□□ -0.95
CLIP1-206ENST00000535290 CTXN3Q4LDR2 81 aa9.12□□□□□ -0.95
CLIP1-206ENST00000535290 GPR158Q5T848 1215 aa9.12□□□□□ -0.95
CLIP1-206ENST00000535290 TRIM68Q6AZZ1 485 aa9.12□□□□□ -0.95
CLIP1-206ENST00000535290 RNF19BQ6ZMZ0 732 aa9.12□□□□□ -0.95
CLIP1-206ENST00000535290 ARMCX6Q7L4S7 300 aa9.12□□□□□ -0.95
CLIP1-206ENST00000535290 OTUD6AQ7L8S5 288 aa9.12□□□□□ -0.95
CLIP1-206ENST00000535290 ZNF605Q86T29 641 aa9.12□□□□□ -0.95
CLIP1-206ENST00000535290 C11orf74Q86VG3 221 aa9.12□□□□□ -0.95
CLIP1-206ENST00000535290 BICD2Q8TD16 824 aa9.12□□□□□ -0.95
CLIP1-206ENST00000535290 ADAMTS14Q8WXS8 1223 aa9.12□□□□□ -0.95
CLIP1-206ENST00000535290 CAMK1GQ96NX5 476 aa9.12□□□□□ -0.95
CLIP1-206ENST00000535290 UBL7Q96S82 380 aaPredicted RBP9.12□□□□□ -0.95
CLIP1-206ENST00000535290 FAM83CQ9BQN1 747 aa9.12□□□□□ -0.95
CLIP1-206ENST00000535290 POLR3CQ9BUI4 534 aaPredicted RBP9.12□□□□□ -0.95
CLIP1-206ENST00000535290 SLKQ9H2G2 1235 aaPredicted RBP9.12□□□□□ -0.95
CLIP1-206ENST00000535290 CRISPLD1Q9H336 500 aa9.12□□□□□ -0.95
CLIP1-206ENST00000535290 EBF3Q9H4W6 596 aa9.12□□□□□ -0.95
CLIP1-206ENST00000535290 VPS54Q9P1Q0 977 aa9.12□□□□□ -0.95
CLIP1-206ENST00000535290 RAI2Q9Y5P3 530 aa9.12□□□□□ -0.95
CLIP1-206ENST00000535290 NUP205Q92621 2012 aa9.12□□□□□ -0.95
CLIP1-206ENST00000535290 PDCD11Q14690 1871 aaKnown RBP9.11□□□□□ -0.95
CLIP1-206ENST00000535290 KALRNO60229 2985 aa9.11□□□□□ -0.95
CLIP1-206ENST00000535290 KLF18A0A0U1RQI7 1052 aa9.11□□□□□ -0.95
CLIP1-206ENST00000535290 H7C4K7 107 aa9.11□□□□□ -0.95
CLIP1-206ENST00000535290 SYN3O14994 580 aa9.11□□□□□ -0.95
CLIP1-206ENST00000535290 PRPF3O43395 683 aaKnown RBP9.11□□□□□ -0.95
CLIP1-206ENST00000535290 SLC37A4O43826 429 aa9.11□□□□□ -0.95
CLIP1-206ENST00000535290 CD59P13987 128 aa9.11□□□□□ -0.95
CLIP1-206ENST00000535290 MCM2P49736 904 aa9.11□□□□□ -0.95
CLIP1-206ENST00000535290 EXOSC10Q01780 885 aaKnown RBP9.11□□□□□ -0.95
CLIP1-206ENST00000535290 CYP4A11Q02928 519 aa9.11□□□□□ -0.95
CLIP1-206ENST00000535290 RUNX3Q13761 415 aa9.11□□□□□ -0.95
CLIP1-206ENST00000535290 PTPAQ15257 358 aa9.11□□□□□ -0.95
CLIP1-206ENST00000535290 TTC22Q5TAA0 569 aa9.11□□□□□ -0.95
CLIP1-206ENST00000535290 EEF1DP3Q658K8 133 aa9.11□□□□□ -0.95
CLIP1-206ENST00000535290 CREB3L3Q68CJ9 461 aa9.11□□□□□ -0.95
CLIP1-206ENST00000535290 ANO7Q6IWH7 933 aa9.11□□□□□ -0.95
CLIP1-206ENST00000535290 SLC23A3Q6PIS1 610 aa9.11□□□□□ -0.95
CLIP1-206ENST00000535290 HDDC3Q8N4P3 179 aa9.11□□□□□ -0.95
CLIP1-206ENST00000535290 TSTD1Q8NFU3 115 aa9.11□□□□□ -0.95
CLIP1-206ENST00000535290 OR2I1PQ8NGU4 316 aa9.11□□□□□ -0.95
CLIP1-206ENST00000535290 RLN3Q8WXF3 142 aa9.11□□□□□ -0.95
CLIP1-206ENST00000535290 DYDC2Q96IM9 177 aa9.11□□□□□ -0.95
CLIP1-206ENST00000535290 UROC1Q96N76 676 aa9.11□□□□□ -0.95
CLIP1-206ENST00000535290 GTPBP2Q9BX10 602 aaKnown RBP9.11□□□□□ -0.95
CLIP1-206ENST00000535290 ATXN3LQ9H3M9 355 aa9.11□□□□□ -0.95
CLIP1-206ENST00000535290 FZD8Q9H461 694 aa9.11□□□□□ -0.95
CLIP1-206ENST00000535290 DDX25Q9UHL0 483 aaKnown RBP9.11□□□□□ -0.95
CLIP1-206ENST00000535290 TPCN1Q9ULQ1 816 aa9.11□□□□□ -0.95
CLIP1-206ENST00000535290 MAFFQ9ULX9 164 aa9.11□□□□□ -0.95
CLIP1-206ENST00000535290 ATXN2Q99700 1313 aaKnown RBP9.1□□□□□ -0.95
CLIP1-206ENST00000535290 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.1□□□□□ -0.95
CLIP1-206ENST00000535290 SMIM28A0A1B0GU29 152 aa9.1□□□□□ -0.95
CLIP1-206ENST00000535290 ANTXRLA6NF34 631 aa9.1□□□□□ -0.95
CLIP1-206ENST00000535290 LRRIQ4A6NIV6 560 aa9.1□□□□□ -0.95
CLIP1-206ENST00000535290 TK2O00142 265 aa9.1□□□□□ -0.95
CLIP1-206ENST00000535290 TNFRSF10BO14763 440 aa9.1□□□□□ -0.95
CLIP1-206ENST00000535290 N4BP3O15049 544 aa9.1□□□□□ -0.95
CLIP1-206ENST00000535290 EDN1P05305 212 aa9.1□□□□□ -0.95
CLIP1-206ENST00000535290 FTH1P19P0C7X4 201 aa9.1□□□□□ -0.95
CLIP1-206ENST00000535290 ARSAP15289 507 aa9.1□□□□□ -0.95
CLIP1-206ENST00000535290 DRD1P21728 446 aa9.1□□□□□ -0.95
CLIP1-206ENST00000535290 DUSP4Q13115 394 aa9.1□□□□□ -0.95
CLIP1-206ENST00000535290 EPHA7Q15375 998 aa9.1□□□□□ -0.95
CLIP1-206ENST00000535290 TRIP6Q15654 476 aaKnown RBP9.1□□□□□ -0.95
CLIP1-206ENST00000535290 FBXO43Q4G163 708 aa9.1□□□□□ -0.95
CLIP1-206ENST00000535290 DNAJB7Q7Z6W7 309 aaPredicted RBP9.1□□□□□ -0.95
CLIP1-206ENST00000535290 RASSF3Q86WH2 238 aa9.1□□□□□ -0.95
CLIP1-206ENST00000535290 SYT12Q8IV01 421 aa9.1□□□□□ -0.95
CLIP1-206ENST00000535290 TPH2Q8IWU9 490 aa9.1□□□□□ -0.95
CLIP1-206ENST00000535290 TMEFF1Q8IYR6 380 aa9.1□□□□□ -0.95
CLIP1-206ENST00000535290 ZNF843Q8N446 348 aa9.1□□□□□ -0.95
CLIP1-206ENST00000535290 FRMD1Q8N878 549 aa9.1□□□□□ -0.95
CLIP1-206ENST00000535290 MDGA1Q8NFP4 955 aa9.1□□□□□ -0.95
CLIP1-206ENST00000535290 PRIMPOLQ96LW4 560 aa9.1□□□□□ -0.95
CLIP1-206ENST00000535290 PGLYRP2Q96PD5 576 aa9.1□□□□□ -0.95
CLIP1-206ENST00000535290 FNBP1Q96RU3 617 aa9.1□□□□□ -0.95
CLIP1-206ENST00000535290 P2RY13Q9BPV8 354 aa9.1□□□□□ -0.95
CLIP1-206ENST00000535290 LSG1Q9H089 658 aaKnown RBP9.1□□□□□ -0.95
CLIP1-206ENST00000535290 POLR3FQ9H1D9 316 aaPredicted RBP9.1□□□□□ -0.95
CLIP1-206ENST00000535290 RWDD1Q9H446 243 aaPredicted RBP9.1□□□□□ -0.95
CLIP1-206ENST00000535290 TASP1Q9H6P5 420 aa9.1□□□□□ -0.95
CLIP1-206ENST00000535290 ZSWIM4Q9H7M6 989 aa9.1□□□□□ -0.95
CLIP1-206ENST00000535290 GPRC5CQ9NQ84 441 aa9.1□□□□□ -0.95
CLIP1-206ENST00000535290 PRMT7Q9NVM4 692 aaPredicted RBP9.1□□□□□ -0.95
CLIP1-206ENST00000535290 THG1LQ9NWX6 298 aaKnown RBP9.1□□□□□ -0.95
CLIP1-206ENST00000535290 NAP1L2Q9ULW6 460 aaPredicted RBP9.1□□□□□ -0.95
CLIP1-206ENST00000535290 USP9XQ93008 2570 aaPredicted RBP9.09□□□□□ -0.95
CLIP1-206ENST00000535290 A0A087WV48 116 aa9.09□□□□□ -0.95
CLIP1-206ENST00000535290 A0A087WWV3 80 aa9.09□□□□□ -0.95
CLIP1-206ENST00000535290 J3QKU1 62 aa9.09□□□□□ -0.95
CLIP1-206ENST00000535290 PODXLO00592 558 aa9.09□□□□□ -0.95
CLIP1-206ENST00000535290 ATXN7O15265 892 aaPredicted RBP9.09□□□□□ -0.95
CLIP1-206ENST00000535290 SH3BP5O60239 455 aa9.09□□□□□ -0.95
CLIP1-206ENST00000535290 OPHN1O60890 802 aa9.09□□□□□ -0.95
CLIP1-206ENST00000535290 DGAT1O75907 488 aa9.09□□□□□ -0.95
CLIP1-206ENST00000535290 SOAT2O75908 522 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms