RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 PARVGQ9HBI0 331 aa10.96□□□□□ -0.65
CLSTN3-203ENST00000534830 HCFC1R1Q9NWW0 138 aa10.96□□□□□ -0.65
CLSTN3-203ENST00000534830 ANKFY1Q9P2R3 1169 aa10.96□□□□□ -0.65
CLSTN3-203ENST00000534830 TUBGCP4Q9UGJ1 667 aa10.96□□□□□ -0.65
CLSTN3-203ENST00000534830 FBXO2Q9UK22 296 aaPredicted RBP10.96□□□□□ -0.65
CLSTN3-203ENST00000534830 SRPRBQ9Y5M8 271 aaKnown RBP10.96□□□□□ -0.65
CLSTN3-203ENST00000534830 STYXL1Q9Y6J8 313 aa10.96□□□□□ -0.65
CLSTN3-203ENST00000534830 A0A0B4J269 797 aa10.95□□□□□ -0.66
CLSTN3-203ENST00000534830 VPS37CA5D8V6 355 aaPredicted RBP10.95□□□□□ -0.66
CLSTN3-203ENST00000534830 LACTBL1A8MY62 500 aa10.95□□□□□ -0.66
CLSTN3-203ENST00000534830 OGTO15294 1046 aa10.95□□□□□ -0.66
CLSTN3-203ENST00000534830 XYLBO75191 536 aa10.95□□□□□ -0.66
CLSTN3-203ENST00000534830 FAM13AO94988 1023 aa10.95□□□□□ -0.66
CLSTN3-203ENST00000534830 HARSP12081 509 aaKnown RBP10.95□□□□□ -0.66
CLSTN3-203ENST00000534830 MARCKSP29966 332 aaPredicted RBP10.95□□□□□ -0.66
CLSTN3-203ENST00000534830 CCR3P51677 355 aa10.95□□□□□ -0.66
CLSTN3-203ENST00000534830 SRSF5Q13243 272 aaKnown RBP10.95□□□□□ -0.66
CLSTN3-203ENST00000534830 DHX8Q14562 1220 aaKnown RBP10.95□□□□□ -0.66
CLSTN3-203ENST00000534830 ENOX2Q16206 610 aaKnown RBP10.95□□□□□ -0.66
CLSTN3-203ENST00000534830 KYAT1Q16773 422 aa10.95□□□□□ -0.66
CLSTN3-203ENST00000534830 UNQ6494/PRO21346Q6UXR6 183 aa10.95□□□□□ -0.66
CLSTN3-203ENST00000534830 MAP4K3Q8IVH8 894 aa10.95□□□□□ -0.66
CLSTN3-203ENST00000534830 TCEAL8Q8IYN2 117 aa10.95□□□□□ -0.66
CLSTN3-203ENST00000534830 ING5Q8WYH8 240 aa10.95□□□□□ -0.66
CLSTN3-203ENST00000534830 CHRDQ9H2X0 955 aa10.95□□□□□ -0.66
CLSTN3-203ENST00000534830 FBXL5Q9UKA1 691 aa10.95□□□□□ -0.66
CLSTN3-203ENST00000534830 CPSF3Q9UKF6 684 aaKnown RBP10.95□□□□□ -0.66
CLSTN3-203ENST00000534830 KCNH3Q9ULD8 1083 aa10.95□□□□□ -0.66
CLSTN3-203ENST00000534830 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.95□□□□□ -0.66
CLSTN3-203ENST00000534830 CEP295Q9C0D2 2601 aa10.95□□□□□ -0.66
CLSTN3-203ENST00000534830 SPEGQ15772 3267 aa10.94□□□□□ -0.66
CLSTN3-203ENST00000534830 TCHHQ07283 1943 aa10.94□□□□□ -0.66
CLSTN3-203ENST00000534830 TSC2P49815 1807 aa10.94□□□□□ -0.66
CLSTN3-203ENST00000534830 H7C4K7 107 aa10.94□□□□□ -0.66
CLSTN3-203ENST00000534830 K7ENM7 598 aa10.94□□□□□ -0.66
CLSTN3-203ENST00000534830 HRO43593 1189 aa10.94□□□□□ -0.66
CLSTN3-203ENST00000534830 PPP1R37O75864 691 aa10.94□□□□□ -0.66
CLSTN3-203ENST00000534830 OAZ2O95190 189 aa10.94□□□□□ -0.66
CLSTN3-203ENST00000534830 SEC24AO95486 1093 aa10.94□□□□□ -0.66
CLSTN3-203ENST00000534830 RHOP08100 348 aa10.94□□□□□ -0.66
CLSTN3-203ENST00000534830 NMT1P30419 496 aaKnown RBP10.94□□□□□ -0.66
CLSTN3-203ENST00000534830 ABCD1P33897 745 aa10.94□□□□□ -0.66
CLSTN3-203ENST00000534830 LIG4P49917 911 aa10.94□□□□□ -0.66
CLSTN3-203ENST00000534830 SPAG1Q07617 926 aa10.94□□□□□ -0.66
CLSTN3-203ENST00000534830 SF3A2Q15428 464 aaKnown RBP10.94□□□□□ -0.66
CLSTN3-203ENST00000534830 TPGS2Q68CL5 300 aa10.94□□□□□ -0.66
CLSTN3-203ENST00000534830 FAM173BQ6P4H8 233 aa10.94□□□□□ -0.66
CLSTN3-203ENST00000534830 ZNF720Q7Z2F6 126 aa10.94□□□□□ -0.66
CLSTN3-203ENST00000534830 C12orf50Q8NA57 414 aaPredicted RBP10.94□□□□□ -0.66
CLSTN3-203ENST00000534830 BEST2Q8NFU1 509 aa10.94□□□□□ -0.66
CLSTN3-203ENST00000534830 DNAJC19Q96DA6 116 aa10.94□□□□□ -0.66
CLSTN3-203ENST00000534830 KIF12Q96FN5 646 aa10.94□□□□□ -0.66
CLSTN3-203ENST00000534830 BICD1Q96G01 975 aa10.94□□□□□ -0.66
CLSTN3-203ENST00000534830 CLIC6Q96NY7 704 aa10.94□□□□□ -0.66
CLSTN3-203ENST00000534830 PLA2G2FQ9BZM2 168 aa10.94□□□□□ -0.66
CLSTN3-203ENST00000534830 LMAN1LQ9HAT1 526 aa10.94□□□□□ -0.66
CLSTN3-203ENST00000534830 STK17AQ9UEE5 414 aa10.94□□□□□ -0.66
CLSTN3-203ENST00000534830 MAFFQ9ULX9 164 aa10.94□□□□□ -0.66
CLSTN3-203ENST00000534830 UBQLN1Q9UMX0 589 aaKnown RBP10.94□□□□□ -0.66
CLSTN3-203ENST00000534830 PCDHB8Q9UN66 801 aa10.94□□□□□ -0.66
CLSTN3-203ENST00000534830 MTMR6Q9Y217 621 aa10.94□□□□□ -0.66
CLSTN3-203ENST00000534830 ZZEF1O43149 2961 aa10.94□□□□□ -0.66
CLSTN3-203ENST00000534830 MYMKA6NI61 221 aa10.93□□□□□ -0.66
CLSTN3-203ENST00000534830 SOBPA7XYQ1 873 aa10.93□□□□□ -0.66
CLSTN3-203ENST00000534830 CHURC1-FNTBB4DL54 471 aa10.93□□□□□ -0.66
CLSTN3-203ENST00000534830 ANKRD63C9JTQ0 380 aa10.93□□□□□ -0.66
CLSTN3-203ENST00000534830 MAN2B1O00754 1011 aa10.93□□□□□ -0.66
CLSTN3-203ENST00000534830 HNRNPDLO14979 420 aaKnown RBP10.93□□□□□ -0.66
CLSTN3-203ENST00000534830 VNN2O95498 520 aa10.93□□□□□ -0.66
CLSTN3-203ENST00000534830 MCM4P33991 863 aa10.93□□□□□ -0.66
CLSTN3-203ENST00000534830 CXCL12P48061 93 aa10.93□□□□□ -0.66
CLSTN3-203ENST00000534830 FNTBP49356 437 aa10.93□□□□□ -0.66
CLSTN3-203ENST00000534830 LIMK1P53667 647 aa10.93□□□□□ -0.66
CLSTN3-203ENST00000534830 SATB1Q01826 763 aa10.93□□□□□ -0.66
CLSTN3-203ENST00000534830 POU5F1Q01860 360 aaKnown RBP10.93□□□□□ -0.66
CLSTN3-203ENST00000534830 SLC39A14Q15043 492 aa10.93□□□□□ -0.66
CLSTN3-203ENST00000534830 CCDC6Q16204 474 aa10.93□□□□□ -0.66
CLSTN3-203ENST00000534830 SLC5A9Q2M3M2 681 aa10.93□□□□□ -0.66
CLSTN3-203ENST00000534830 CTXN3Q4LDR2 81 aa10.93□□□□□ -0.66
CLSTN3-203ENST00000534830 PABPC1LQ4VXU2 614 aaKnown RBP10.93□□□□□ -0.66
CLSTN3-203ENST00000534830 ZC2HC1CQ53FD0 456 aaPredicted RBP10.93□□□□□ -0.66
CLSTN3-203ENST00000534830 PRSS36Q5K4E3 855 aa10.93□□□□□ -0.66
CLSTN3-203ENST00000534830 SPATA1Q5VX52 437 aa10.93□□□□□ -0.66
CLSTN3-203ENST00000534830 HEATR6Q6AI08 1181 aaKnown RBP10.93□□□□□ -0.66
CLSTN3-203ENST00000534830 CEP68Q76N32 757 aa10.93□□□□□ -0.66
CLSTN3-203ENST00000534830 CD302Q8IX05 232 aa10.93□□□□□ -0.66
CLSTN3-203ENST00000534830 NPAS3Q8IXF0 933 aa10.93□□□□□ -0.66
CLSTN3-203ENST00000534830 FAM160A2Q8N612 972 aaPredicted RBP10.93□□□□□ -0.66
CLSTN3-203ENST00000534830 APPL2Q8NEU8 664 aa10.93□□□□□ -0.66
CLSTN3-203ENST00000534830 MCRS1Q96EZ8 462 aa10.93□□□□□ -0.66
CLSTN3-203ENST00000534830 USP28Q96RU2 1077 aa10.93□□□□□ -0.66
CLSTN3-203ENST00000534830 IER2Q9BTL4 223 aa10.93□□□□□ -0.66
CLSTN3-203ENST00000534830 RPF1Q9H9Y2 349 aaKnown RBP10.93□□□□□ -0.66
CLSTN3-203ENST00000534830 AFF4Q9UHB7 1163 aaKnown RBP10.93□□□□□ -0.66
CLSTN3-203ENST00000534830 NUB1Q9Y5A7 615 aa10.93□□□□□ -0.66
CLSTN3-203ENST00000534830 GREB1Q4ZG55 1949 aa10.93□□□□□ -0.66
CLSTN3-203ENST00000534830 A0A087X0B3 334 aa10.92□□□□□ -0.66
CLSTN3-203ENST00000534830 ANO9A1A5B4 782 aa10.92□□□□□ -0.66
CLSTN3-203ENST00000534830 FRMD3A2A2Y4 597 aa10.92□□□□□ -0.66
CLSTN3-203ENST00000534830 SHISA7A6NL88 538 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms