RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 FUBP1Q96AE4 644 aaKnown RBP4.52□□□□□ -1.69
USP48-215ENST00000534705 WDR11Q9BZH6 1224 aa4.52□□□□□ -1.69
USP48-215ENST00000534705 PRDM13Q9H4Q3 707 aa4.52□□□□□ -1.69
USP48-215ENST00000534705 MAN1C1Q9NR34 630 aa4.52□□□□□ -1.69
USP48-215ENST00000534705 SYBUQ9NX95 663 aa4.52□□□□□ -1.69
USP48-215ENST00000534705 KCNE5Q9UJ90 142 aa4.52□□□□□ -1.69
USP48-215ENST00000534705 CASKIN1Q8WXD9 1431 aa4.52□□□□□ -1.69
USP48-215ENST00000534705 A0A1B0GTW7 788 aa4.51□□□□□ -1.69
USP48-215ENST00000534705 IKBKBO14920 756 aa4.51□□□□□ -1.69
USP48-215ENST00000534705 ALDH1L1O75891 902 aa4.51□□□□□ -1.69
USP48-215ENST00000534705 ABLIM3O94929 683 aa4.51□□□□□ -1.69
USP48-215ENST00000534705 FTH1P19P0C7X4 201 aa4.51□□□□□ -1.69
USP48-215ENST00000534705 HKR1P10072 659 aa4.51□□□□□ -1.69
USP48-215ENST00000534705 DDX6P26196 483 aaKnown RBP eCLIP4.51□□□□□ -1.69
USP48-215ENST00000534705 PTTG1IPP53801 180 aa4.51□□□□□ -1.69
USP48-215ENST00000534705 MAPK7Q13164 816 aa4.51□□□□□ -1.69
USP48-215ENST00000534705 IL10RAQ13651 578 aa4.51□□□□□ -1.69
USP48-215ENST00000534705 LCE1AQ5T7P2 110 aa4.51□□□□□ -1.69
USP48-215ENST00000534705 GADL1Q6ZQY3 521 aa4.51□□□□□ -1.69
USP48-215ENST00000534705 PRR18Q8N4B5 295 aa4.51□□□□□ -1.69
USP48-215ENST00000534705 BOLLQ8N9W6 283 aaKnown RBP4.51□□□□□ -1.69
USP48-215ENST00000534705 SLC9A6Q92581 669 aa4.51□□□□□ -1.69
USP48-215ENST00000534705 HSPBAP1Q96EW2 488 aa4.51□□□□□ -1.69
USP48-215ENST00000534705 MED15Q96RN5 788 aa4.51□□□□□ -1.69
USP48-215ENST00000534705 DMRTA2Q96SC8 542 aa4.51□□□□□ -1.69
USP48-215ENST00000534705 MYOCQ99972 504 aa4.51□□□□□ -1.69
USP48-215ENST00000534705 BRIP1Q9BX63 1249 aa4.51□□□□□ -1.69
USP48-215ENST00000534705 SIDT1Q9NXL6 827 aaKnown RBP4.51□□□□□ -1.69
USP48-215ENST00000534705 JKAMPQ9P055 326 aa4.51□□□□□ -1.69
USP48-215ENST00000534705 TESQ9UGI8 421 aaKnown RBP4.51□□□□□ -1.69
USP48-215ENST00000534705 RUVBL1Q9Y265 456 aaKnown RBP4.51□□□□□ -1.69
USP48-215ENST00000534705 FRMD4BQ9Y2L6 1034 aa4.51□□□□□ -1.69
USP48-215ENST00000534705 LUC7L2Q9Y383 392 aaKnown RBP4.51□□□□□ -1.69
USP48-215ENST00000534705 PCDHB1Q9Y5F3 818 aa4.51□□□□□ -1.69
USP48-215ENST00000534705 PCDHA13Q9Y5I0 950 aa4.51□□□□□ -1.69
USP48-215ENST00000534705 CLIP1P30622 1438 aa4.51□□□□□ -1.69
USP48-215ENST00000534705 CD109Q6YHK3 1445 aa4.51□□□□□ -1.69
USP48-215ENST00000534705 BCORL1Q5H9F3 1711 aa4.51□□□□□ -1.69
USP48-215ENST00000534705 ADAMTSL3P82987 1691 aa4.51□□□□□ -1.69
USP48-215ENST00000534705 KIDINS220Q9ULH0 1771 aa4.5□□□□□ -1.69
USP48-215ENST00000534705 CCDC18Q5T9S5 1454 aa4.5□□□□□ -1.69
USP48-215ENST00000534705 CEP162Q5TB80 1403 aa4.5□□□□□ -1.69
USP48-215ENST00000534705 MYADML2A6NDP7 307 aa4.5□□□□□ -1.69
USP48-215ENST00000534705 GRM6O15303 877 aa4.5□□□□□ -1.69
USP48-215ENST00000534705 ANXA1P04083 346 aa4.5□□□□□ -1.69
USP48-215ENST00000534705 CD1AP06126 327 aa4.5□□□□□ -1.69
USP48-215ENST00000534705 CKBP12277 381 aa4.5□□□□□ -1.69
USP48-215ENST00000534705 CXCR5P32302 372 aa4.5□□□□□ -1.69
USP48-215ENST00000534705 EPHB1P54762 984 aa4.5□□□□□ -1.69
USP48-215ENST00000534705 KRTAP10-7P60409 375 aaPredicted RBP4.5□□□□□ -1.69
USP48-215ENST00000534705 DSC2Q02487 901 aa4.5□□□□□ -1.69
USP48-215ENST00000534705 OCA2Q04671 838 aa4.5□□□□□ -1.69
USP48-215ENST00000534705 MCL1Q07820 350 aa4.5□□□□□ -1.69
USP48-215ENST00000534705 PIN1Q13526 163 aaPredicted RBP4.5□□□□□ -1.69
USP48-215ENST00000534705 TTF1Q15361 905 aaPredicted RBP4.5□□□□□ -1.69
USP48-215ENST00000534705 SP5Q6BEB4 398 aaPredicted RBP4.5□□□□□ -1.69
USP48-215ENST00000534705 USP45Q70EL2 814 aa4.5□□□□□ -1.69
USP48-215ENST00000534705 ZNF365Q70YC5 407 aa4.5□□□□□ -1.69
USP48-215ENST00000534705 UBE3BQ7Z3V4 1068 aa4.5□□□□□ -1.69
USP48-215ENST00000534705 MAPKAPK5Q8IW41 473 aa4.5□□□□□ -1.69
USP48-215ENST00000534705 FAM43AQ8N2R8 423 aa4.5□□□□□ -1.69
USP48-215ENST00000534705 CPEB3Q8NE35 698 aaKnown RBP4.5□□□□□ -1.69
USP48-215ENST00000534705 SCARB1Q8WTV0 552 aa4.5□□□□□ -1.69
USP48-215ENST00000534705 LINC00476Q8WZB0 136 aa4.5□□□□□ -1.69
USP48-215ENST00000534705 KAT5Q92993 513 aa4.5□□□□□ -1.69
USP48-215ENST00000534705 CLPTM1LQ96KA5 538 aa4.5□□□□□ -1.69
USP48-215ENST00000534705 PACSIN1Q9BY11 444 aa4.5□□□□□ -1.69
USP48-215ENST00000534705 TMEM74BQ9NUR3 256 aa4.5□□□□□ -1.69
USP48-215ENST00000534705 RLIMQ9NVW2 624 aa4.5□□□□□ -1.69
USP48-215ENST00000534705 ANKFY1Q9P2R3 1169 aa4.5□□□□□ -1.69
USP48-215ENST00000534705 POLHQ9Y253 713 aa4.5□□□□□ -1.69
USP48-215ENST00000534705 ANKRD6Q9Y2G4 727 aa4.5□□□□□ -1.69
USP48-215ENST00000534705 EPN1Q9Y6I3 576 aaPredicted RBP4.5□□□□□ -1.69
USP48-215ENST00000534705 ZMYM4Q5VZL5 1548 aa4.5□□□□□ -1.69
USP48-215ENST00000534705 NEO1Q92859 1461 aa4.49□□□□□ -1.69
USP48-215ENST00000534705 SUPT6HQ7KZ85 1726 aaKnown RBP4.49□□□□□ -1.69
USP48-215ENST00000534705 KDM5CP41229 1560 aa4.49□□□□□ -1.69
USP48-215ENST00000534705 TIAM1Q13009 1591 aa4.49□□□□□ -1.69
USP48-215ENST00000534705 SAMD9LQ8IVG5 1584 aa4.49□□□□□ -1.69
USP48-215ENST00000534705 TROQ12816 1431 aaPredicted RBP4.49□□□□□ -1.69
USP48-215ENST00000534705 ADGBQ8N7X0 1667 aa4.49□□□□□ -1.69
USP48-215ENST00000534705 TCRBV7S2A1N4TA0A589 114 aa4.49□□□□□ -1.69
USP48-215ENST00000534705 KIAA0391O15091 583 aaKnown RBP4.49□□□□□ -1.69
USP48-215ENST00000534705 EIF5BO60841 1220 aaKnown RBP4.49□□□□□ -1.69
USP48-215ENST00000534705 SLC43A1O75387 559 aa4.49□□□□□ -1.69
USP48-215ENST00000534705 CDKL5O76039 1030 aa4.49□□□□□ -1.69
USP48-215ENST00000534705 NDUFA10O95299 355 aa4.49□□□□□ -1.69
USP48-215ENST00000534705 IL33O95760 270 aa4.49□□□□□ -1.69
USP48-215ENST00000534705 TYRP1P17643 537 aa4.49□□□□□ -1.69
USP48-215ENST00000534705 FGFR4P22455 802 aa4.49□□□□□ -1.69
USP48-215ENST00000534705 SLC6A2P23975 617 aa4.49□□□□□ -1.69
USP48-215ENST00000534705 SLC6A4P31645 630 aa4.49□□□□□ -1.69
USP48-215ENST00000534705 SEC24CP53992 1094 aa4.49□□□□□ -1.69
USP48-215ENST00000534705 GUCY1B3Q02153 619 aa4.49□□□□□ -1.69
USP48-215ENST00000534705 SLFN5Q08AF3 891 aa4.49□□□□□ -1.69
USP48-215ENST00000534705 TSHZ3Q63HK5 1081 aa4.49□□□□□ -1.69
USP48-215ENST00000534705 B3GNTL1Q67FW5 361 aaPredicted RBP4.49□□□□□ -1.69
USP48-215ENST00000534705 TMEM132CQ8N3T6 1108 aa4.49□□□□□ -1.69
USP48-215ENST00000534705 FAM98AQ8NCA5 519 aaKnown RBP4.49□□□□□ -1.69
USP48-215ENST00000534705 SIMC1Q8NDZ2 872 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms