RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 DRP2Q13474 957 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 LRRC32Q14392 662 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 SSPNQ14714 243 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 MYBPC3Q14896 1274 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 UGT8Q16880 541 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 PABPC1LQ4VXU2 614 aaKnown RBP3.49□□□□□ -1.85
CSDE1-216ENST00000534389 ANKRD20A8PQ5CZ79 823 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 CREB3L3Q68CJ9 461 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 SLC30A9Q6PML9 568 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 CCDC73Q6ZRK6 1079 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 LHFPL2Q6ZUX7 228 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 ZBTB46Q86UZ6 589 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 FAM129CQ86XR2 697 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 FOXP4Q8IVH2 680 aaPredicted RBP3.49□□□□□ -1.85
CSDE1-216ENST00000534389 RTKN2Q8IZC4 609 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 TMTC2Q8N394 836 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 GALNT15Q8N3T1 639 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 CLRN3Q8NCR9 226 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 ZSCAN18Q8TBC5 510 aaPredicted RBP3.49□□□□□ -1.85
CSDE1-216ENST00000534389 FAM81AQ8TBF8 368 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 MYCBPAPQ8TBZ2 947 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 TGFBRAP1Q8WUH2 860 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 ZFAND2BQ8WV99 257 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 CUL5Q93034 780 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 RBM41Q96IZ5 413 aaKnown RBP3.49□□□□□ -1.85
CSDE1-216ENST00000534389 MAML3Q96JK9 1138 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 CCDC114Q96M63 670 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 TOX2Q96NM4 488 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 ACAP3Q96P50 834 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 ALS2CR12Q96Q35 445 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 CCT8L2Q96SF2 557 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 MMS19Q96T76 1030 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 PSMD1Q99460 953 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 FOXB1Q99853 325 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 SYT3Q9BQG1 590 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 MYL10Q9BUA6 226 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 SELENOOQ9BVL4 669 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 BTBD2Q9BX70 525 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 ZDHHC5Q9C0B5 715 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 NAT10Q9H0A0 1025 aaKnown RBP3.49□□□□□ -1.85
CSDE1-216ENST00000534389 TMEM168Q9H0V1 697 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 OR10A5Q9H207 317 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 ALDH8A1Q9H2A2 487 aaPredicted RBP3.49□□□□□ -1.85
CSDE1-216ENST00000534389 SUDS3Q9H7L9 328 aaPredicted RBP3.49□□□□□ -1.85
CSDE1-216ENST00000534389 BARX1Q9HBU1 254 aaPredicted RBP3.49□□□□□ -1.85
CSDE1-216ENST00000534389 LZTFL1Q9NQ48 299 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 USP40Q9NVE5 1235 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 PANK4Q9NVE7 773 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 DDX56Q9NY93 547 aaKnown RBP3.49□□□□□ -1.85
CSDE1-216ENST00000534389 MYO1AQ9UBC5 1043 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 HDAC6Q9UBN7 1215 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 ANAPC4Q9UJX5 808 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 PCDHA7Q9UN72 937 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 ZNF510Q9Y2H8 683 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 REXO2Q9Y3B8 237 aaKnown RBP3.49□□□□□ -1.85
CSDE1-216ENST00000534389 L3MBTL1Q9Y468 752 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 ASB3Q9Y575 518 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 CYP46A1Q9Y6A2 500 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 CEMIPQ8WUJ3 1361 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 AGLP35573 1532 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 TARBP1Q13395 1621 aaKnown RBP3.48□□□□□ -1.85
CSDE1-216ENST00000534389 IRS2Q9Y4H2 1338 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 KIAA1210Q9ULL0 1709 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 CDC42BPGQ6DT37 1551 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 CPSF1Q10570 1443 aaKnown RBP3.48□□□□□ -1.85
CSDE1-216ENST00000534389 RIMS2Q9UQ26 1411 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 CTAGE15A4D2H0 777 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 CTAGE9A4FU28 777 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 C5orf60A6NFR6 353 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 RASSF10A6NK89 507 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 B4DLN1 442 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 GOLGA8KD6RF30 607 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 PDLIM1O00151 329 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 LIN7AO14910 233 aaPredicted RBP3.48□□□□□ -1.85
CSDE1-216ENST00000534389 DAPK3O43293 454 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 PPIP5K2O43314 1243 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 TPD52L2O43399 206 aaKnown RBP3.48□□□□□ -1.85
CSDE1-216ENST00000534389 TGM5O43548 720 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 STX10O60499 249 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 SRGAP2O75044 1071 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 PRKD3O94806 890 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 ANP32DO95626 131 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 EYA4O95677 639 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 TSPAN15O95858 294 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 PRLP01236 227 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 HMGCRP04035 888 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 TUBBP07437 444 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 PDGFRBP09619 1106 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 CLEC2LP0C7M8 214 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 CTAGE8P0CG41 777 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 TSPY4P0CV99 314 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 TSPY10P0CW01 314 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 TOP1P11387 765 aaKnown RBP3.48□□□□□ -1.85
CSDE1-216ENST00000534389 ZNF18P17022 549 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 PDCP20941 246 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 RPS6KB1P23443 525 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 THBS2P35442 1172 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 PBX1P40424 430 aa3.48□□□□□ -1.85
CSDE1-216ENST00000534389 SARSP49591 514 aaKnown RBP3.48□□□□□ -1.85
CSDE1-216ENST00000534389 GNAQP50148 359 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms