RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 NPR1P16066 1061 aa8.02□□□□□ -1.13
CASP4-213ENST00000534356 ZFP36P26651 326 aaKnown RBP8.02□□□□□ -1.13
CASP4-213ENST00000534356 ZNF135P52742 658 aaPredicted RBP8.02□□□□□ -1.13
CASP4-213ENST00000534356 FOXE3Q13461 319 aa8.02□□□□□ -1.13
CASP4-213ENST00000534356 CRB2Q5IJ48 1285 aa8.02□□□□□ -1.13
CASP4-213ENST00000534356 RNF220Q5VTB9 566 aa8.02□□□□□ -1.13
CASP4-213ENST00000534356 PPP4R4Q6NUP7 873 aa8.02□□□□□ -1.13
CASP4-213ENST00000534356 APOA5Q6Q788 366 aa8.02□□□□□ -1.13
CASP4-213ENST00000534356 MAPKAPK5Q8IW41 473 aa8.02□□□□□ -1.13
CASP4-213ENST00000534356 IL31RAQ8NI17 732 aa8.02□□□□□ -1.13
CASP4-213ENST00000534356 ZNF503Q96F45 646 aa8.02□□□□□ -1.13
CASP4-213ENST00000534356 PNKPQ96T60 521 aa8.02□□□□□ -1.13
CASP4-213ENST00000534356 AKIP1Q9NQ31 210 aa8.02□□□□□ -1.13
CASP4-213ENST00000534356 CNNM1Q9NRU3 951 aa8.02□□□□□ -1.13
CASP4-213ENST00000534356 CDYLQ9Y232 598 aa8.02□□□□□ -1.13
CASP4-213ENST00000534356 MAP3K2Q9Y2U5 619 aa8.02□□□□□ -1.13
CASP4-213ENST00000534356 FPGT-TNNI3KV9GXZ4 949 aa8.02□□□□□ -1.13
CASP4-213ENST00000534356 ABCC8Q09428 1581 aa8.01□□□□□ -1.13
CASP4-213ENST00000534356 RNASET2O00584 256 aaKnown RBP8.01□□□□□ -1.13
CASP4-213ENST00000534356 PHGDHO43175 533 aaKnown RBP8.01□□□□□ -1.13
CASP4-213ENST00000534356 DARS2Q6PI48 645 aaKnown RBP8.01□□□□□ -1.13
CASP4-213ENST00000534356 PCSK9Q8NBP7 692 aaKnown RBP8.01□□□□□ -1.13
CASP4-213ENST00000534356 TTC17Q96AE7 1141 aa8.01□□□□□ -1.13
CASP4-213ENST00000534356 P2RX7Q99572 595 aaKnown RBP8.01□□□□□ -1.13
CASP4-213ENST00000534356 DDX21Q9NR30 783 aaKnown RBP eCLIP8.01□□□□□ -1.13
CASP4-213ENST00000534356 MRPS18AQ9NVS2 196 aaKnown RBP8.01□□□□□ -1.13
CASP4-213ENST00000534356 PIH1D1Q9NWS0 290 aaKnown RBP8.01□□□□□ -1.13
CASP4-213ENST00000534356 FGD5Q6ZNL6 1462 aa8□□□□□ -1.13
CASP4-213ENST00000534356 GAGE12BA1L429 117 aa8□□□□□ -1.13
CASP4-213ENST00000534356 GAGE12HA6NDE8 117 aa8□□□□□ -1.13
CASP4-213ENST00000534356 CAND2O75155 1236 aa8□□□□□ -1.13
CASP4-213ENST00000534356 GPANK1O95872 356 aa8□□□□□ -1.13
CASP4-213ENST00000534356 CFIP05156 583 aa8□□□□□ -1.13
CASP4-213ENST00000534356 CACNB3P54284 484 aa8□□□□□ -1.13
CASP4-213ENST00000534356 FAM193AP78312 1265 aa8□□□□□ -1.13
CASP4-213ENST00000534356 HABP2Q14520 560 aaPredicted RBP8□□□□□ -1.13
CASP4-213ENST00000534356 HLTFQ14527 1009 aaKnown RBP eCLIP8□□□□□ -1.13
CASP4-213ENST00000534356 B3GNTL1Q67FW5 361 aaPredicted RBP8□□□□□ -1.13
CASP4-213ENST00000534356 NOL8Q76FK4 1167 aaKnown RBP8□□□□□ -1.13
CASP4-213ENST00000534356 CFAP52Q8N1V2 620 aa8□□□□□ -1.13
CASP4-213ENST00000534356 TMEM132CQ8N3T6 1108 aa8□□□□□ -1.13
CASP4-213ENST00000534356 NSUN7Q8NE18 718 aaKnown RBP8□□□□□ -1.13
CASP4-213ENST00000534356 SLC25A43Q8WUT9 341 aaPredicted RBP8□□□□□ -1.13
CASP4-213ENST00000534356 ANKS1AQ92625 1134 aa8□□□□□ -1.13
CASP4-213ENST00000534356 SARGQ9BW04 601 aa8□□□□□ -1.13
CASP4-213ENST00000534356 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8□□□□□ -1.13
CASP4-213ENST00000534356 PCDHGB6Q9Y5F9 930 aa8□□□□□ -1.13
CASP4-213ENST00000534356 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8□□□□□ -1.13
CASP4-213ENST00000534356 USP19O94966 1318 aa8□□□□□ -1.13
CASP4-213ENST00000534356 GAPVD1Q14C86 1478 aa8□□□□□ -1.13
CASP4-213ENST00000534356 CUX1P39880 1505 aa7.99□□□□□ -1.13
CASP4-213ENST00000534356 MARCH11A6NNE9 402 aa7.99□□□□□ -1.13
CASP4-213ENST00000534356 GOLIM4O00461 696 aa7.99□□□□□ -1.13
CASP4-213ENST00000534356 NDUFA10O95299 355 aa7.99□□□□□ -1.13
CASP4-213ENST00000534356 GNAI2P04899 355 aa7.99□□□□□ -1.13
CASP4-213ENST00000534356 INSRRP14616 1297 aa7.99□□□□□ -1.13
CASP4-213ENST00000534356 KCNJ5P48544 419 aa7.99□□□□□ -1.13
CASP4-213ENST00000534356 SEMA5AQ13591 1074 aa7.99□□□□□ -1.13
CASP4-213ENST00000534356 BEAN1Q3B7T3 259 aa7.99□□□□□ -1.13
CASP4-213ENST00000534356 MIIPQ5JXC2 388 aa7.99□□□□□ -1.13
CASP4-213ENST00000534356 KSR2Q6VAB6 950 aa7.99□□□□□ -1.13
CASP4-213ENST00000534356 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.99□□□□□ -1.13
CASP4-213ENST00000534356 USP37Q86T82 979 aa7.99□□□□□ -1.13
CASP4-213ENST00000534356 LRTOMTQ8WZ04 291 aa7.99□□□□□ -1.13
CASP4-213ENST00000534356 LRIG1Q96JA1 1093 aa7.99□□□□□ -1.13
CASP4-213ENST00000534356 TINAGL1Q9GZM7 467 aaPredicted RBP7.99□□□□□ -1.13
CASP4-213ENST00000534356 SLC2A4RGQ9NR83 387 aa7.99□□□□□ -1.13
CASP4-213ENST00000534356 FAM50BQ9Y247 325 aa7.99□□□□□ -1.13
CASP4-213ENST00000534356 DNAJB5O75953 348 aa7.98□□□□□ -1.13
CASP4-213ENST00000534356 KIF20AO95235 890 aa7.98□□□□□ -1.13
CASP4-213ENST00000534356 TRIM27P14373 513 aa7.98□□□□□ -1.13
CASP4-213ENST00000534356 PEX2P28328 305 aa7.98□□□□□ -1.13
CASP4-213ENST00000534356 SLC7A1P30825 629 aa7.98□□□□□ -1.13
CASP4-213ENST00000534356 COBLL1Q53SF7 1204 aa7.98□□□□□ -1.13
CASP4-213ENST00000534356 FOXR2Q6PJQ5 311 aa7.98□□□□□ -1.13
CASP4-213ENST00000534356 CCAR1Q8IX12 1150 aaKnown RBP7.98□□□□□ -1.13
CASP4-213ENST00000534356 Q8NA96 180 aa7.98□□□□□ -1.13
CASP4-213ENST00000534356 ZNF483Q8TF39 744 aaPredicted RBP7.98□□□□□ -1.13
CASP4-213ENST00000534356 GPRC5BQ9NZH0 403 aa7.98□□□□□ -1.13
CASP4-213ENST00000534356 TPCN1Q9ULQ1 816 aa7.98□□□□□ -1.13
CASP4-213ENST00000534356 MED16Q9Y2X0 877 aa7.98□□□□□ -1.13
CASP4-213ENST00000534356 MYO1FO00160 1098 aa7.97□□□□□ -1.13
CASP4-213ENST00000534356 TBX3O15119 743 aa7.97□□□□□ -1.13
CASP4-213ENST00000534356 FRS3O43559 492 aa7.97□□□□□ -1.13
CASP4-213ENST00000534356 ERN1O75460 977 aaKnown RBP7.97□□□□□ -1.13
CASP4-213ENST00000534356 ZFPL1O95159 310 aa7.97□□□□□ -1.13
CASP4-213ENST00000534356 PEX11BO96011 259 aa7.97□□□□□ -1.13
CASP4-213ENST00000534356 CHEK2O96017 543 aa7.97□□□□□ -1.13
CASP4-213ENST00000534356 KRT18P05783 430 aaKnown RBP7.97□□□□□ -1.13
CASP4-213ENST00000534356 ARFIP2P53365 341 aa7.97□□□□□ -1.13
CASP4-213ENST00000534356 ZNF844Q08AG5 666 aa7.97□□□□□ -1.13
CASP4-213ENST00000534356 RESTQ13127 1097 aa7.97□□□□□ -1.13
CASP4-213ENST00000534356 TUBA3CQ13748 450 aa7.97□□□□□ -1.13
CASP4-213ENST00000534356 FNDC7Q5VTL7 733 aa7.97□□□□□ -1.13
CASP4-213ENST00000534356 TUBA3EQ6PEY2 450 aa7.97□□□□□ -1.13
CASP4-213ENST00000534356 CPEB3Q8NE35 698 aaKnown RBP7.97□□□□□ -1.13
CASP4-213ENST00000534356 MED15Q96RN5 788 aa7.97□□□□□ -1.13
CASP4-213ENST00000534356 TRIM54Q9BYV2 358 aa7.97□□□□□ -1.13
CASP4-213ENST00000534356 ARNT2Q9HBZ2 717 aa7.97□□□□□ -1.13
CASP4-213ENST00000534356 RNF181Q9P0P0 153 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms