RNA–Protein interactions for RNA: ENST00000534091.1

LDLRAD3-206, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-206ENST00000534091 BMS1Q14692 1282 aaKnown RBP10.8□□□□□ -0.68
LDLRAD3-206ENST00000534091 PTPN14Q15678 1187 aa10.8□□□□□ -0.68
LDLRAD3-206ENST00000534091 SLC18A3Q16572 532 aa10.8□□□□□ -0.68
LDLRAD3-206ENST00000534091 SLC10A6Q3KNW5 377 aa10.8□□□□□ -0.68
LDLRAD3-206ENST00000534091 WDR44Q5JSH3 913 aa10.8□□□□□ -0.68
LDLRAD3-206ENST00000534091 LMBRD2Q68DH5 695 aaPredicted RBP10.8□□□□□ -0.68
LDLRAD3-206ENST00000534091 TRAPPC11Q7Z392 1133 aa10.8□□□□□ -0.68
LDLRAD3-206ENST00000534091 VPS36Q86VN1 386 aa10.8□□□□□ -0.68
LDLRAD3-206ENST00000534091 CDR2LQ86X02 465 aaPredicted RBP10.8□□□□□ -0.68
LDLRAD3-206ENST00000534091 FAM71AQ8IYT1 594 aa10.8□□□□□ -0.68
LDLRAD3-206ENST00000534091 ABI1Q8IZP0 508 aa10.8□□□□□ -0.68
LDLRAD3-206ENST00000534091 LRRC43Q8N309 656 aa10.8□□□□□ -0.68
LDLRAD3-206ENST00000534091 ACRBPQ8NEB7 543 aa10.8□□□□□ -0.68
LDLRAD3-206ENST00000534091 GDPD5Q8WTR4 605 aa10.8□□□□□ -0.68
LDLRAD3-206ENST00000534091 TAF4BQ92750 862 aa10.8□□□□□ -0.68
LDLRAD3-206ENST00000534091 SNX27Q96L92 541 aa10.8□□□□□ -0.68
LDLRAD3-206ENST00000534091 KREMEN1Q96MU8 473 aa10.8□□□□□ -0.68
LDLRAD3-206ENST00000534091 SYT11Q9BT88 431 aa10.8□□□□□ -0.68
LDLRAD3-206ENST00000534091 IMPG2Q9BZV3 1241 aa10.8□□□□□ -0.68
LDLRAD3-206ENST00000534091 MTMR12Q9C0I1 747 aa10.8□□□□□ -0.68
LDLRAD3-206ENST00000534091 DEF6Q9H4E7 631 aa10.8□□□□□ -0.68
LDLRAD3-206ENST00000534091 FAM124BQ9H5Z6 455 aaPredicted RBP10.8□□□□□ -0.68
LDLRAD3-206ENST00000534091 HAUS4Q9H6D7 363 aa10.8□□□□□ -0.68
LDLRAD3-206ENST00000534091 VRTNQ9H8Y1 702 aa10.8□□□□□ -0.68
LDLRAD3-206ENST00000534091 CERS4Q9HA82 394 aa10.8□□□□□ -0.68
LDLRAD3-206ENST00000534091 LUC7LQ9NQ29 371 aaKnown RBP10.8□□□□□ -0.68
LDLRAD3-206ENST00000534091 TRMT1Q9NXH9 659 aaKnown RBP10.8□□□□□ -0.68
LDLRAD3-206ENST00000534091 NENFQ9UMX5 172 aa10.8□□□□□ -0.68
LDLRAD3-206ENST00000534091 LZTS1Q9Y250 596 aa10.8□□□□□ -0.68
LDLRAD3-206ENST00000534091 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.8□□□□□ -0.68
LDLRAD3-206ENST00000534091 LACTBL1A8MY62 500 aa10.79□□□□□ -0.68
LDLRAD3-206ENST00000534091 PJA2O43164 708 aa10.79□□□□□ -0.68
LDLRAD3-206ENST00000534091 AKR1B10O60218 316 aa10.79□□□□□ -0.68
LDLRAD3-206ENST00000534091 OFD1O75665 1012 aa10.79□□□□□ -0.68
LDLRAD3-206ENST00000534091 STAU1O95793 577 aaKnown RBP10.79□□□□□ -0.68
LDLRAD3-206ENST00000534091 ATICP31939 592 aa10.79□□□□□ -0.68
LDLRAD3-206ENST00000534091 VAV2P52735 878 aa10.79□□□□□ -0.68
LDLRAD3-206ENST00000534091 NOP14P78316 857 aaKnown RBP10.79□□□□□ -0.68
LDLRAD3-206ENST00000534091 MRPS5P82675 430 aaKnown RBP10.79□□□□□ -0.68
LDLRAD3-206ENST00000534091 SPA17Q15506 151 aa10.79□□□□□ -0.68
LDLRAD3-206ENST00000534091 XKR4Q5GH76 650 aa10.79□□□□□ -0.68
LDLRAD3-206ENST00000534091 UBXN11Q5T124 520 aa10.79□□□□□ -0.68
LDLRAD3-206ENST00000534091 C10orf76Q5T2E6 689 aa10.79□□□□□ -0.68
LDLRAD3-206ENST00000534091 TWF2Q6IBS0 349 aaKnown RBP10.79□□□□□ -0.68
LDLRAD3-206ENST00000534091 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.79□□□□□ -0.68
LDLRAD3-206ENST00000534091 MRPL10Q7Z7H8 261 aaKnown RBP10.79□□□□□ -0.68
LDLRAD3-206ENST00000534091 HACE1Q8IYU2 909 aa10.79□□□□□ -0.68
LDLRAD3-206ENST00000534091 PPM1KQ8N3J5 372 aa10.79□□□□□ -0.68
LDLRAD3-206ENST00000534091 TSGA10Q9BZW7 698 aa10.79□□□□□ -0.68
LDLRAD3-206ENST00000534091 NSUN3Q9H649 340 aaKnown RBP10.79□□□□□ -0.68
LDLRAD3-206ENST00000534091 FAM105AQ9NUU6 356 aa10.79□□□□□ -0.68
LDLRAD3-206ENST00000534091 CNTN3Q9P232 1028 aa10.79□□□□□ -0.68
LDLRAD3-206ENST00000534091 KANSL3Q9P2N6 904 aa10.79□□□□□ -0.68
LDLRAD3-206ENST00000534091 MYO1AQ9UBC5 1043 aa10.79□□□□□ -0.68
LDLRAD3-206ENST00000534091 PIN4Q9Y237 131 aaKnown RBP10.79□□□□□ -0.68
LDLRAD3-206ENST00000534091 MRPL42Q9Y6G3 142 aaKnown RBP10.79□□□□□ -0.68
LDLRAD3-206ENST00000534091 KIAA1671Q9BY89 1806 aa10.79□□□□□ -0.68
LDLRAD3-206ENST00000534091 TBKBP1A7MCY6 615 aa10.78□□□□□ -0.68
LDLRAD3-206ENST00000534091 RFXAPO00287 272 aa10.78□□□□□ -0.68
LDLRAD3-206ENST00000534091 FOXN3O00409 490 aaPredicted RBP10.78□□□□□ -0.68
LDLRAD3-206ENST00000534091 ZNF263O14978 683 aa10.78□□□□□ -0.68
LDLRAD3-206ENST00000534091 PHACTR2O75167 634 aa10.78□□□□□ -0.68
LDLRAD3-206ENST00000534091 NFICP08651 508 aa10.78□□□□□ -0.68
LDLRAD3-206ENST00000534091 TNNT1P13805 278 aa10.78□□□□□ -0.68
LDLRAD3-206ENST00000534091 ARHGAP25P42331 645 aa10.78□□□□□ -0.68
LDLRAD3-206ENST00000534091 YARSP54577 528 aaKnown RBP10.78□□□□□ -0.68
LDLRAD3-206ENST00000534091 OSTNP61366 133 aa10.78□□□□□ -0.68
LDLRAD3-206ENST00000534091 ETF1P62495 437 aaKnown RBP10.78□□□□□ -0.68
LDLRAD3-206ENST00000534091 TFAMQ00059 246 aaKnown RBP10.78□□□□□ -0.68
LDLRAD3-206ENST00000534091 PLCB3Q01970 1234 aa10.78□□□□□ -0.68
LDLRAD3-206ENST00000534091 PTK2Q05397 1052 aa10.78□□□□□ -0.68
LDLRAD3-206ENST00000534091 TRPC3Q13507 836 aa10.78□□□□□ -0.68
LDLRAD3-206ENST00000534091 CUL2Q13617 745 aa10.78□□□□□ -0.68
LDLRAD3-206ENST00000534091 COL19A1Q14993 1142 aa10.78□□□□□ -0.68
LDLRAD3-206ENST00000534091 TMEM132DQ14C87 1099 aa10.78□□□□□ -0.68
LDLRAD3-206ENST00000534091 ARHGAP44Q17R89 818 aa10.78□□□□□ -0.68
LDLRAD3-206ENST00000534091 SGSM1Q2NKQ1 1148 aa10.78□□□□□ -0.68
LDLRAD3-206ENST00000534091 PUS10Q3MIT2 529 aaKnown RBP10.78□□□□□ -0.68
LDLRAD3-206ENST00000534091 ARHGAP29Q52LW3 1261 aa10.78□□□□□ -0.68
LDLRAD3-206ENST00000534091 TJAP1Q5JTD0 557 aa10.78□□□□□ -0.68
LDLRAD3-206ENST00000534091 JADE1Q6IE81 842 aa10.78□□□□□ -0.68
LDLRAD3-206ENST00000534091 ALKAL1Q6UXT8 129 aa10.78□□□□□ -0.68
LDLRAD3-206ENST00000534091 ZNF571Q7Z3V5 609 aaPredicted RBP10.78□□□□□ -0.68
LDLRAD3-206ENST00000534091 UBR7Q8N806 425 aa10.78□□□□□ -0.68
LDLRAD3-206ENST00000534091 OLIG1Q8TAK6 271 aa10.78□□□□□ -0.68
LDLRAD3-206ENST00000534091 CXorf38Q8TB03 319 aa10.78□□□□□ -0.68
LDLRAD3-206ENST00000534091 KAT5Q92993 513 aa10.78□□□□□ -0.68
LDLRAD3-206ENST00000534091 TATDN2Q93075 761 aa10.78□□□□□ -0.68
LDLRAD3-206ENST00000534091 HLA-CQ95604 372 aa10.78□□□□□ -0.68
LDLRAD3-206ENST00000534091 FAM212AQ96EL1 285 aa10.78□□□□□ -0.68
LDLRAD3-206ENST00000534091 C16orf45Q96MC5 204 aaPredicted RBP10.78□□□□□ -0.68
LDLRAD3-206ENST00000534091 CASD1Q96PB1 797 aa10.78□□□□□ -0.68
LDLRAD3-206ENST00000534091 EIF2AQ9BY44 585 aaKnown RBP10.78□□□□□ -0.68
LDLRAD3-206ENST00000534091 TRIM6Q9C030 488 aaPredicted RBP10.78□□□□□ -0.68
LDLRAD3-206ENST00000534091 APOBEC3GQ9HC16 384 aaKnown RBP10.78□□□□□ -0.68
LDLRAD3-206ENST00000534091 PUF60Q9UHX1 559 aaKnown RBP10.78□□□□□ -0.68
LDLRAD3-206ENST00000534091 ITGA11Q9UKX5 1188 aa10.78□□□□□ -0.68
LDLRAD3-206ENST00000534091 MTUS1Q9ULD2 1270 aa10.78□□□□□ -0.68
LDLRAD3-206ENST00000534091 CNTN6Q9UQ52 1028 aa10.78□□□□□ -0.68
LDLRAD3-206ENST00000534091 CHD9Q3L8U1 2897 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms