RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 Q6ZS46 218 aa8.49□□□□□ -1.05
CASP4-212ENST00000533730 FAM43BQ6ZT52 329 aaPredicted RBP8.49□□□□□ -1.05
CASP4-212ENST00000533730 OTUD6AQ7L8S5 288 aa8.49□□□□□ -1.05
CASP4-212ENST00000533730 C4orf19Q8IY42 314 aa8.49□□□□□ -1.05
CASP4-212ENST00000533730 BADQ92934 168 aa8.49□□□□□ -1.05
CASP4-212ENST00000533730 CTAGE1Q96RT6 745 aa8.49□□□□□ -1.05
CASP4-212ENST00000533730 JPH2Q9BR39 696 aaPredicted RBP8.49□□□□□ -1.05
CASP4-212ENST00000533730 SSBP4Q9BWG4 385 aaPredicted RBP8.49□□□□□ -1.05
CASP4-212ENST00000533730 TMEM60Q9H2L4 133 aa8.49□□□□□ -1.05
CASP4-212ENST00000533730 TRIM39Q9HCM9 518 aa8.49□□□□□ -1.05
CASP4-212ENST00000533730 MTMR6Q9Y217 621 aa8.49□□□□□ -1.05
CASP4-212ENST00000533730 PCDHA2Q9Y5H9 948 aa8.49□□□□□ -1.05
CASP4-212ENST00000533730 BRCA2P51587 3418 aa8.49□□□□□ -1.05
CASP4-212ENST00000533730 LTBP2Q14767 1821 aa8.48□□□□□ -1.05
CASP4-212ENST00000533730 LOC100289279A0A1B0GTE1 492 aa8.48□□□□□ -1.05
CASP4-212ENST00000533730 SMIM35A0A1B0GVV1 85 aa8.48□□□□□ -1.05
CASP4-212ENST00000533730 M0QZ92 97 aa8.48□□□□□ -1.05
CASP4-212ENST00000533730 EIF4EBP3O60516 100 aaPredicted RBP8.48□□□□□ -1.05
CASP4-212ENST00000533730 UBOX5O94941 541 aa8.48□□□□□ -1.05
CASP4-212ENST00000533730 ALX3O95076 343 aa8.48□□□□□ -1.05
CASP4-212ENST00000533730 LYPLA2O95372 231 aa8.48□□□□□ -1.05
CASP4-212ENST00000533730 DLGAP3O95886 979 aa8.48□□□□□ -1.05
CASP4-212ENST00000533730 IQCF3P0C7M6 154 aa8.48□□□□□ -1.05
CASP4-212ENST00000533730 FGFR1P11362 822 aa8.48□□□□□ -1.05
CASP4-212ENST00000533730 CKBP12277 381 aa8.48□□□□□ -1.05
CASP4-212ENST00000533730 ITGB8P26012 769 aa8.48□□□□□ -1.05
CASP4-212ENST00000533730 KLRC1P26715 233 aa8.48□□□□□ -1.05
CASP4-212ENST00000533730 TMOD1P28289 359 aa8.48□□□□□ -1.05
CASP4-212ENST00000533730 CYP2C18P33260 490 aa8.48□□□□□ -1.05
CASP4-212ENST00000533730 THPOP40225 353 aa8.48□□□□□ -1.05
CASP4-212ENST00000533730 TECP42680 631 aa8.48□□□□□ -1.05
CASP4-212ENST00000533730 GATA4P43694 442 aa8.48□□□□□ -1.05
CASP4-212ENST00000533730 YARSP54577 528 aaKnown RBP8.48□□□□□ -1.05
CASP4-212ENST00000533730 ZNF200P98182 395 aaPredicted RBP8.48□□□□□ -1.05
CASP4-212ENST00000533730 PCBP1Q15365 356 aaKnown RBP eCLIP8.48□□□□□ -1.05
CASP4-212ENST00000533730 UGCGQ16739 394 aa8.48□□□□□ -1.05
CASP4-212ENST00000533730 DUOXA2Q1HG44 320 aa8.48□□□□□ -1.05
CASP4-212ENST00000533730 TRIM71Q2Q1W2 868 aaKnown RBP8.48□□□□□ -1.05
CASP4-212ENST00000533730 MARCH8Q5T0T0 291 aa8.48□□□□□ -1.05
CASP4-212ENST00000533730 PKN3Q6P5Z2 889 aa8.48□□□□□ -1.05
CASP4-212ENST00000533730 PSRC1Q6PGN9 363 aaPredicted RBP8.48□□□□□ -1.05
CASP4-212ENST00000533730 MTHFD1LQ6UB35 978 aa8.48□□□□□ -1.05
CASP4-212ENST00000533730 LRRC8DQ7L1W4 858 aa8.48□□□□□ -1.05
CASP4-212ENST00000533730 C14orf80Q86SX3 495 aa8.48□□□□□ -1.05
CASP4-212ENST00000533730 NME8Q8N427 588 aa8.48□□□□□ -1.05
CASP4-212ENST00000533730 C4orf32Q8N8J7 132 aa8.48□□□□□ -1.05
CASP4-212ENST00000533730 SLC7A14Q8TBB6 771 aa8.48□□□□□ -1.05
CASP4-212ENST00000533730 PPP1R13LQ8WUF5 828 aa8.48□□□□□ -1.05
CASP4-212ENST00000533730 HSD17B14Q9BPX1 270 aa8.48□□□□□ -1.05
CASP4-212ENST00000533730 EIF2AK1Q9BQI3 630 aaKnown RBP8.48□□□□□ -1.05
CASP4-212ENST00000533730 LXNQ9BS40 222 aa8.48□□□□□ -1.05
CASP4-212ENST00000533730 MTIF3Q9H2K0 278 aaKnown RBP8.48□□□□□ -1.05
CASP4-212ENST00000533730 AKTIPQ9H8T0 292 aa8.48□□□□□ -1.05
CASP4-212ENST00000533730 TUFT1Q9NNX1 390 aa8.48□□□□□ -1.05
CASP4-212ENST00000533730 IL23AQ9NPF7 189 aa8.48□□□□□ -1.05
CASP4-212ENST00000533730 ZIM2Q9NZV7 527 aa8.48□□□□□ -1.05
CASP4-212ENST00000533730 LRWD1Q9UFC0 647 aa8.48□□□□□ -1.05
CASP4-212ENST00000533730 PCDHGC5Q9Y5F6 944 aa8.48□□□□□ -1.05
CASP4-212ENST00000533730 MYH9P35579 1960 aaKnown RBP8.48□□□□□ -1.05
CASP4-212ENST00000533730 KAT6AQ92794 2004 aa8.47□□□□□ -1.05
CASP4-212ENST00000533730 RSPH10B2B2RC85 870 aa8.47□□□□□ -1.05
CASP4-212ENST00000533730 RGS13O14921 159 aa8.47□□□□□ -1.05
CASP4-212ENST00000533730 TBX1O43435 398 aa8.47□□□□□ -1.05
CASP4-212ENST00000533730 CBFA2T2O43439 604 aa8.47□□□□□ -1.05
CASP4-212ENST00000533730 SLC26A4O43511 780 aa8.47□□□□□ -1.05
CASP4-212ENST00000533730 AKAP10O43572 662 aa8.47□□□□□ -1.05
CASP4-212ENST00000533730 GAS2O43903 313 aaKnown RBP8.47□□□□□ -1.05
CASP4-212ENST00000533730 SLITRK3O94933 977 aa8.47□□□□□ -1.05
CASP4-212ENST00000533730 C22orf31O95567 290 aa8.47□□□□□ -1.05
CASP4-212ENST00000533730 IGHA1P01876 353 aa8.47□□□□□ -1.05
CASP4-212ENST00000533730 RSPH10BP0C881 870 aa8.47□□□□□ -1.05
CASP4-212ENST00000533730 ZSCAN22P10073 491 aaPredicted RBP8.47□□□□□ -1.05
CASP4-212ENST00000533730 ACTN1P12814 892 aa8.47□□□□□ -1.05
CASP4-212ENST00000533730 XRCC6P12956 609 aaKnown RBP eCLIP8.47□□□□□ -1.05
CASP4-212ENST00000533730 CSF2RAP15509 400 aa8.47□□□□□ -1.05
CASP4-212ENST00000533730 RPA1P27694 616 aa8.47□□□□□ -1.05
CASP4-212ENST00000533730 DNM2P50570 870 aa8.47□□□□□ -1.05
CASP4-212ENST00000533730 CCL23P55773 120 aa8.47□□□□□ -1.05
CASP4-212ENST00000533730 CDC42EP1Q00587 391 aa8.47□□□□□ -1.05
CASP4-212ENST00000533730 RING1Q06587 406 aa8.47□□□□□ -1.05
CASP4-212ENST00000533730 TARBP2Q15633 366 aaKnown RBP8.47□□□□□ -1.05
CASP4-212ENST00000533730 TRIM61Q5EBN2 209 aa8.47□□□□□ -1.05
CASP4-212ENST00000533730 PPM1JQ5JR12 505 aa8.47□□□□□ -1.05
CASP4-212ENST00000533730 ATL3Q6DD88 541 aa8.47□□□□□ -1.05
CASP4-212ENST00000533730 ACAD11Q709F0 780 aa8.47□□□□□ -1.05
CASP4-212ENST00000533730 MCATQ8IVS2 390 aaKnown RBP8.47□□□□□ -1.05
CASP4-212ENST00000533730 TPH2Q8IWU9 490 aa8.47□□□□□ -1.05
CASP4-212ENST00000533730 AGGF1Q8N302 714 aaeCLIP8.47□□□□□ -1.05
CASP4-212ENST00000533730 ZNF513Q8N8E2 541 aaPredicted RBP8.47□□□□□ -1.05
CASP4-212ENST00000533730 IGSF22Q8N9C0 903 aa8.47□□□□□ -1.05
CASP4-212ENST00000533730 DYDC2Q96IM9 177 aa8.47□□□□□ -1.05
CASP4-212ENST00000533730 AK8Q96MA6 479 aa8.47□□□□□ -1.05
CASP4-212ENST00000533730 CCDC43Q96MW1 224 aaKnown RBP8.47□□□□□ -1.05
CASP4-212ENST00000533730 ZNF396Q96N95 335 aaPredicted RBP8.47□□□□□ -1.05
CASP4-212ENST00000533730 MAP7D2Q96T17 732 aa8.47□□□□□ -1.05
CASP4-212ENST00000533730 POLR3CQ9BUI4 534 aaPredicted RBP8.47□□□□□ -1.05
CASP4-212ENST00000533730 KLHL25Q9H0H3 589 aa8.47□□□□□ -1.05
CASP4-212ENST00000533730 WNT8AQ9H1J5 351 aa8.47□□□□□ -1.05
CASP4-212ENST00000533730 PRO3102Q9H379 93 aa8.47□□□□□ -1.05
CASP4-212ENST00000533730 ANKEF1Q9NU02 776 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms