RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 IQCEQ6IPM2 695 aa12.77□□□□□ -0.37
COMMD9-208ENST00000533643 SCARA5Q6ZMJ2 495 aa12.77□□□□□ -0.37
COMMD9-208ENST00000533643 DDX53Q86TM3 631 aaKnown RBP12.77□□□□□ -0.37
COMMD9-208ENST00000533643 VSTM4Q8IW00 320 aa12.77□□□□□ -0.37
COMMD9-208ENST00000533643 RNF168Q8IYW5 571 aaPredicted RBP12.77□□□□□ -0.37
COMMD9-208ENST00000533643 PPM1KQ8N3J5 372 aa12.77□□□□□ -0.37
COMMD9-208ENST00000533643 PDCL2Q8N4E4 241 aa12.77□□□□□ -0.37
COMMD9-208ENST00000533643 TOP6BLQ8N6T0 577 aa12.77□□□□□ -0.37
COMMD9-208ENST00000533643 NEK11Q8NG66 645 aa12.77□□□□□ -0.37
COMMD9-208ENST00000533643 KAT5Q92993 513 aa12.77□□□□□ -0.37
COMMD9-208ENST00000533643 TIFAQ96CG3 184 aa12.77□□□□□ -0.37
COMMD9-208ENST00000533643 TMEM169Q96HH4 297 aa12.77□□□□□ -0.37
COMMD9-208ENST00000533643 MRFAP1L1Q96HT8 127 aa12.77□□□□□ -0.37
COMMD9-208ENST00000533643 FAXDC2Q96IV6 333 aa12.77□□□□□ -0.37
COMMD9-208ENST00000533643 SAMD11Q96NU1 681 aa12.77□□□□□ -0.37
COMMD9-208ENST00000533643 MMS19Q96T76 1030 aa12.77□□□□□ -0.37
COMMD9-208ENST00000533643 ARID3AQ99856 593 aa12.77□□□□□ -0.37
COMMD9-208ENST00000533643 NAA15Q9BXJ9 866 aaKnown RBP12.77□□□□□ -0.37
COMMD9-208ENST00000533643 BCO2Q9BYV7 579 aa12.77□□□□□ -0.37
COMMD9-208ENST00000533643 SMYD3Q9H7B4 428 aa12.77□□□□□ -0.37
COMMD9-208ENST00000533643 CYP3A43Q9HB55 503 aa12.77□□□□□ -0.37
COMMD9-208ENST00000533643 MTUS1Q9ULD2 1270 aa12.77□□□□□ -0.37
COMMD9-208ENST00000533643 TIMM13Q9Y5L4 95 aaPredicted RBP12.77□□□□□ -0.37
COMMD9-208ENST00000533643 SF3B1O75533 1304 aaKnown RBP eCLIP12.77□□□□□ -0.37
COMMD9-208ENST00000533643 HUS1O60921 280 aa12.76□□□□□ -0.37
COMMD9-208ENST00000533643 ADCY5O95622 1261 aa12.76□□□□□ -0.37
COMMD9-208ENST00000533643 CYP11A1P05108 521 aa12.76□□□□□ -0.37
COMMD9-208ENST00000533643 ODC1P11926 461 aa12.76□□□□□ -0.37
COMMD9-208ENST00000533643 UCHL3P15374 230 aa12.76□□□□□ -0.37
COMMD9-208ENST00000533643 TYMPP19971 482 aa12.76□□□□□ -0.37
COMMD9-208ENST00000533643 FGFR3P22607 806 aa12.76□□□□□ -0.37
COMMD9-208ENST00000533643 TKTP29401 623 aaKnown RBP12.76□□□□□ -0.37
COMMD9-208ENST00000533643 MRE11P49959 708 aa12.76□□□□□ -0.37
COMMD9-208ENST00000533643 GCNT1Q02742 428 aa12.76□□□□□ -0.37
COMMD9-208ENST00000533643 KRT17Q04695 432 aa12.76□□□□□ -0.37
COMMD9-208ENST00000533643 PPP2R2DQ66LE6 453 aa12.76□□□□□ -0.37
COMMD9-208ENST00000533643 DPH6Q7L8W6 267 aa12.76□□□□□ -0.37
COMMD9-208ENST00000533643 UBR7Q8N806 425 aa12.76□□□□□ -0.37
COMMD9-208ENST00000533643 APPL2Q8NEU8 664 aa12.76□□□□□ -0.37
COMMD9-208ENST00000533643 SPPL3Q8TCT6 385 aa12.76□□□□□ -0.37
COMMD9-208ENST00000533643 KBTBD7Q8WVZ9 684 aa12.76□□□□□ -0.37
COMMD9-208ENST00000533643 B3GALT6Q96L58 329 aa12.76□□□□□ -0.37
COMMD9-208ENST00000533643 MRPL45Q9BRJ2 306 aaKnown RBP12.76□□□□□ -0.37
COMMD9-208ENST00000533643 CERS4Q9HA82 394 aa12.76□□□□□ -0.37
COMMD9-208ENST00000533643 SLC28A3Q9HAS3 691 aa12.76□□□□□ -0.37
COMMD9-208ENST00000533643 DNAJC12Q9UKB3 198 aa12.76□□□□□ -0.37
COMMD9-208ENST00000533643 FHOD1Q9Y613 1164 aa12.76□□□□□ -0.37
COMMD9-208ENST00000533643 KIAA1671Q9BY89 1806 aa12.76□□□□□ -0.37
COMMD9-208ENST00000533643 GBF1Q92538 1859 aa12.76□□□□□ -0.37
COMMD9-208ENST00000533643 ARHGEF37A1IGU5 675 aa12.75□□□□□ -0.37
COMMD9-208ENST00000533643 SYN3O14994 580 aa12.75□□□□□ -0.37
COMMD9-208ENST00000533643 TACC1O75410 805 aa12.75□□□□□ -0.37
COMMD9-208ENST00000533643 SOD2P04179 222 aa12.75□□□□□ -0.37
COMMD9-208ENST00000533643 FAM163BP0C2L3 166 aa12.75□□□□□ -0.37
COMMD9-208ENST00000533643 ACO1P21399 889 aaKnown RBP12.75□□□□□ -0.37
COMMD9-208ENST00000533643 WARSP23381 471 aaKnown RBP12.75□□□□□ -0.37
COMMD9-208ENST00000533643 TBXAS1P24557 533 aaPredicted RBP12.75□□□□□ -0.37
COMMD9-208ENST00000533643 MFAP3P55082 362 aa12.75□□□□□ -0.37
COMMD9-208ENST00000533643 POLR2FP61218 127 aaKnown RBP12.75□□□□□ -0.37
COMMD9-208ENST00000533643 ARHGAP44Q17R89 818 aa12.75□□□□□ -0.37
COMMD9-208ENST00000533643 USP41Q3LFD5 358 aa12.75□□□□□ -0.37
COMMD9-208ENST00000533643 SPECC1LQ69YQ0 1117 aa12.75□□□□□ -0.37
COMMD9-208ENST00000533643 ITIH6Q6UXX5 1313 aa12.75□□□□□ -0.37
COMMD9-208ENST00000533643 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.75□□□□□ -0.37
COMMD9-208ENST00000533643 ENOSF1Q7L5Y1 443 aa12.75□□□□□ -0.37
COMMD9-208ENST00000533643 OSTM1Q86WC4 334 aa12.75□□□□□ -0.37
COMMD9-208ENST00000533643 ADGRF2Q8IZF7 708 aa12.75□□□□□ -0.37
COMMD9-208ENST00000533643 VPS52Q8N1B4 723 aa12.75□□□□□ -0.37
COMMD9-208ENST00000533643 TMEM86AQ8N2M4 240 aa12.75□□□□□ -0.37
COMMD9-208ENST00000533643 FBXO22Q8NEZ5 403 aa12.75□□□□□ -0.37
COMMD9-208ENST00000533643 FAM81BQ96LP2 452 aa12.75□□□□□ -0.37
COMMD9-208ENST00000533643 TTPALQ9BTX7 342 aa12.75□□□□□ -0.37
COMMD9-208ENST00000533643 C11orf84Q9BUA3 381 aaPredicted RBP12.75□□□□□ -0.37
COMMD9-208ENST00000533643 HERC2P3Q9BVR0 1158 aa12.75□□□□□ -0.37
COMMD9-208ENST00000533643 TTYH3Q9C0H2 523 aa12.75□□□□□ -0.37
COMMD9-208ENST00000533643 ALG13Q9NP73 1137 aaKnown RBP12.75□□□□□ -0.37
COMMD9-208ENST00000533643 CHST7Q9NS84 486 aa12.75□□□□□ -0.37
COMMD9-208ENST00000533643 FBXL5Q9UKA1 691 aa12.75□□□□□ -0.37
COMMD9-208ENST00000533643 DSEQ9UL01 958 aa12.75□□□□□ -0.37
COMMD9-208ENST00000533643 LZTS1Q9Y250 596 aa12.75□□□□□ -0.37
COMMD9-208ENST00000533643 CHD7Q9P2D1 2997 aa12.75□□□□□ -0.37
COMMD9-208ENST00000533643 LAMA3Q16787 3333 aa12.74□□□□□ -0.37
COMMD9-208ENST00000533643 EPOPA6NHQ4 379 aa12.74□□□□□ -0.37
COMMD9-208ENST00000533643 H3BNC9 293 aa12.74□□□□□ -0.37
COMMD9-208ENST00000533643 RNF225M0QZC1 329 aaPredicted RBP12.74□□□□□ -0.37
COMMD9-208ENST00000533643 GABRDO14764 452 aa12.74□□□□□ -0.37
COMMD9-208ENST00000533643 GRM6O15303 877 aa12.74□□□□□ -0.37
COMMD9-208ENST00000533643 HCRTO43612 131 aa12.74□□□□□ -0.37
COMMD9-208ENST00000533643 OAZ2O95190 189 aa12.74□□□□□ -0.37
COMMD9-208ENST00000533643 CD58P19256 250 aa12.74□□□□□ -0.37
COMMD9-208ENST00000533643 TRIM21P19474 475 aaKnown RBP12.74□□□□□ -0.37
COMMD9-208ENST00000533643 RFX1P22670 979 aa12.74□□□□□ -0.37
COMMD9-208ENST00000533643 DNAJB1P25685 340 aa12.74□□□□□ -0.37
COMMD9-208ENST00000533643 LMO2P25791 158 aa12.74□□□□□ -0.37
COMMD9-208ENST00000533643 GNL1P36915 607 aaPredicted RBP12.74□□□□□ -0.37
COMMD9-208ENST00000533643 INCA1Q0VD86 236 aa12.74□□□□□ -0.37
COMMD9-208ENST00000533643 MRPL58Q14197 206 aaKnown RBP12.74□□□□□ -0.37
COMMD9-208ENST00000533643 FIGNQ5HY92 759 aa12.74□□□□□ -0.37
COMMD9-208ENST00000533643 RTP2Q5QGT7 225 aa12.74□□□□□ -0.37
COMMD9-208ENST00000533643 VARS2Q5ST30 1063 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms