RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 MICAL2O94851 1124 aa9.47□□□□□ -0.89
COPB1-210ENST00000533533 ATF2P15336 505 aa9.47□□□□□ -0.89
COPB1-210ENST00000533533 PFKFB1P16118 471 aa9.47□□□□□ -0.89
COPB1-210ENST00000533533 FCARP24071 287 aa9.47□□□□□ -0.89
COPB1-210ENST00000533533 NMT1P30419 496 aaKnown RBP9.47□□□□□ -0.89
COPB1-210ENST00000533533 ELF1P32519 619 aa9.47□□□□□ -0.89
COPB1-210ENST00000533533 YARSP54577 528 aaKnown RBP9.47□□□□□ -0.89
COPB1-210ENST00000533533 OSTNP61366 133 aa9.47□□□□□ -0.89
COPB1-210ENST00000533533 SOX4Q06945 474 aaPredicted RBP9.47□□□□□ -0.89
COPB1-210ENST00000533533 MTAPQ13126 283 aa9.47□□□□□ -0.89
COPB1-210ENST00000533533 ZNF568Q3ZCX4 644 aa9.47□□□□□ -0.89
COPB1-210ENST00000533533 XKR4Q5GH76 650 aa9.47□□□□□ -0.89
COPB1-210ENST00000533533 FAM78AQ5JUQ0 283 aa9.47□□□□□ -0.89
COPB1-210ENST00000533533 PRSS36Q5K4E3 855 aa9.47□□□□□ -0.89
COPB1-210ENST00000533533 TSSK4Q6SA08 328 aa9.47□□□□□ -0.89
COPB1-210ENST00000533533 ALKAL1Q6UXT8 129 aa9.47□□□□□ -0.89
COPB1-210ENST00000533533 MAMSTRQ6ZN01 415 aa9.47□□□□□ -0.89
COPB1-210ENST00000533533 HAUS6Q7Z4H7 955 aa9.47□□□□□ -0.89
COPB1-210ENST00000533533 SFR1Q86XK3 245 aa9.47□□□□□ -0.89
COPB1-210ENST00000533533 CCDC65Q8IXS2 484 aa9.47□□□□□ -0.89
COPB1-210ENST00000533533 TCEAL8Q8IYN2 117 aa9.47□□□□□ -0.89
COPB1-210ENST00000533533 ZNF687Q8N1G0 1237 aa9.47□□□□□ -0.89
COPB1-210ENST00000533533 CEP120Q8N960 986 aa9.47□□□□□ -0.89
COPB1-210ENST00000533533 TMEM161BQ8NDZ6 487 aa9.47□□□□□ -0.89
COPB1-210ENST00000533533 TCEAL4Q96EI5 215 aa9.47□□□□□ -0.89
COPB1-210ENST00000533533 CORO1BQ9BR76 489 aa9.47□□□□□ -0.89
COPB1-210ENST00000533533 PYM1Q9BRP8 204 aaKnown RBP9.47□□□□□ -0.89
COPB1-210ENST00000533533 CCDC94Q9BW85 323 aaPredicted RBP9.47□□□□□ -0.89
COPB1-210ENST00000533533 BLZF1Q9H2G9 400 aa9.47□□□□□ -0.89
COPB1-210ENST00000533533 TNMDQ9H2S6 317 aa9.47□□□□□ -0.89
COPB1-210ENST00000533533 BRD9Q9H8M2 597 aa9.47□□□□□ -0.89
COPB1-210ENST00000533533 MRPL44Q9H9J2 332 aaKnown RBP9.47□□□□□ -0.89
COPB1-210ENST00000533533 ZFP14Q9HCL3 533 aa9.47□□□□□ -0.89
COPB1-210ENST00000533533 TOPORSQ9NS56 1045 aaPredicted RBP9.47□□□□□ -0.89
COPB1-210ENST00000533533 SLC38A7Q9NVC3 462 aa9.47□□□□□ -0.89
COPB1-210ENST00000533533 PANK4Q9NVE7 773 aa9.47□□□□□ -0.89
COPB1-210ENST00000533533 CHMP5Q9NZZ3 219 aa9.47□□□□□ -0.89
COPB1-210ENST00000533533 ARHGAP28Q9P2N2 729 aa9.47□□□□□ -0.89
COPB1-210ENST00000533533 SERTAD1Q9UHV2 236 aa9.47□□□□□ -0.89
COPB1-210ENST00000533533 CIZ1Q9ULV3 898 aaPredicted RBP9.47□□□□□ -0.89
COPB1-210ENST00000533533 COL4A2P08572 1712 aa9.47□□□□□ -0.89
COPB1-210ENST00000533533 PRR5-ARHGAP8B1AHC4 643 aa9.46□□□□□ -0.9
COPB1-210ENST00000533533 H7C4K7 107 aa9.46□□□□□ -0.9
COPB1-210ENST00000533533 PODXLO00592 558 aa9.46□□□□□ -0.9
COPB1-210ENST00000533533 ZNF197O14709 1029 aa9.46□□□□□ -0.9
COPB1-210ENST00000533533 SYN3O14994 580 aa9.46□□□□□ -0.9
COPB1-210ENST00000533533 ATMINO43313 823 aaPredicted RBP9.46□□□□□ -0.9
COPB1-210ENST00000533533 GCNT3O95395 438 aa9.46□□□□□ -0.9
COPB1-210ENST00000533533 SEC24AO95486 1093 aa9.46□□□□□ -0.9
COPB1-210ENST00000533533 MAPTP10636 758 aaKnown RBP9.46□□□□□ -0.9
COPB1-210ENST00000533533 GAP43P17677 238 aa9.46□□□□□ -0.9
COPB1-210ENST00000533533 TGM1P22735 817 aa9.46□□□□□ -0.9
COPB1-210ENST00000533533 CMA1P23946 247 aa9.46□□□□□ -0.9
COPB1-210ENST00000533533 CASP1P29466 404 aa9.46□□□□□ -0.9
COPB1-210ENST00000533533 GRM5P41594 1212 aa9.46□□□□□ -0.9
COPB1-210ENST00000533533 CCR2P41597 374 aa9.46□□□□□ -0.9
COPB1-210ENST00000533533 SYKP43405 635 aa9.46□□□□□ -0.9
COPB1-210ENST00000533533 LIG4P49917 911 aa9.46□□□□□ -0.9
COPB1-210ENST00000533533 ZNF131P52739 623 aa9.46□□□□□ -0.9
COPB1-210ENST00000533533 ATXN1P54253 815 aaKnown RBP9.46□□□□□ -0.9
COPB1-210ENST00000533533 NCKAP1LP55160 1127 aa9.46□□□□□ -0.9
COPB1-210ENST00000533533 ARPP19P56211 112 aa9.46□□□□□ -0.9
COPB1-210ENST00000533533 ARHGAP8P85298 464 aa9.46□□□□□ -0.9
COPB1-210ENST00000533533 LMNB2Q03252 620 aa9.46□□□□□ -0.9
COPB1-210ENST00000533533 GRM2Q14416 872 aa9.46□□□□□ -0.9
COPB1-210ENST00000533533 E2F4Q16254 413 aa9.46□□□□□ -0.9
COPB1-210ENST00000533533 ZC2HC1CQ53FD0 456 aaPredicted RBP9.46□□□□□ -0.9
COPB1-210ENST00000533533 TPGS2Q68CL5 300 aa9.46□□□□□ -0.9
COPB1-210ENST00000533533 TAS1R3Q7RTX0 852 aa9.46□□□□□ -0.9
COPB1-210ENST00000533533 GRAMD1CQ8IYS0 662 aa9.46□□□□□ -0.9
COPB1-210ENST00000533533 ZMAT2Q96NC0 199 aaKnown RBP9.46□□□□□ -0.9
COPB1-210ENST00000533533 ASB16Q96NS5 453 aa9.46□□□□□ -0.9
COPB1-210ENST00000533533 ACO2Q99798 780 aaKnown RBP9.46□□□□□ -0.9
COPB1-210ENST00000533533 NTPCRQ9BSD7 190 aaKnown RBP9.46□□□□□ -0.9
COPB1-210ENST00000533533 TRMT61BQ9BVS5 477 aaKnown RBP9.46□□□□□ -0.9
COPB1-210ENST00000533533 CDT1Q9H211 546 aa9.46□□□□□ -0.9
COPB1-210ENST00000533533 CHRDQ9H2X0 955 aa9.46□□□□□ -0.9
COPB1-210ENST00000533533 CYP4F11Q9HBI6 524 aa9.46□□□□□ -0.9
COPB1-210ENST00000533533 PTPRHQ9HD43 1115 aa9.46□□□□□ -0.9
COPB1-210ENST00000533533 NDRG2Q9UN36 371 aaKnown RBP9.46□□□□□ -0.9
COPB1-210ENST00000533533 INSL5Q9Y5Q6 135 aa9.46□□□□□ -0.9
COPB1-210ENST00000533533 TCHHQ07283 1943 aa9.46□□□□□ -0.9
COPB1-210ENST00000533533 CFAP47Q6ZTR5 3102 aa9.46□□□□□ -0.9
COPB1-210ENST00000533533 NRG2O14511 850 aaPredicted RBP9.45□□□□□ -0.9
COPB1-210ENST00000533533 HNRNPDLO14979 420 aaKnown RBP9.45□□□□□ -0.9
COPB1-210ENST00000533533 CLDN3O15551 220 aa9.45□□□□□ -0.9
COPB1-210ENST00000533533 TDGF1P13385 188 aa9.45□□□□□ -0.9
COPB1-210ENST00000533533 KCNE1P15382 129 aa9.45□□□□□ -0.9
COPB1-210ENST00000533533 PSMC3P17980 439 aa9.45□□□□□ -0.9
COPB1-210ENST00000533533 RPL9P32969 192 aaKnown RBP9.45□□□□□ -0.9
COPB1-210ENST00000533533 NDUFA8P51970 172 aa9.45□□□□□ -0.9
COPB1-210ENST00000533533 NRLP54845 237 aa9.45□□□□□ -0.9
COPB1-210ENST00000533533 MRPL58Q14197 206 aaKnown RBP9.45□□□□□ -0.9
COPB1-210ENST00000533533 CYP4A22Q5TCH4 519 aa9.45□□□□□ -0.9
COPB1-210ENST00000533533 MPZL3Q6UWV2 235 aa9.45□□□□□ -0.9
COPB1-210ENST00000533533 PDZD4Q76G19 769 aaPredicted RBP9.45□□□□□ -0.9
COPB1-210ENST00000533533 MAP4K3Q8IVH8 894 aa9.45□□□□□ -0.9
COPB1-210ENST00000533533 SYCP3Q8IZU3 236 aa9.45□□□□□ -0.9
COPB1-210ENST00000533533 ELMOD1Q8N336 334 aa9.45□□□□□ -0.9
COPB1-210ENST00000533533 NOC3LQ8WTT2 800 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms