RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 GARTP22102 1010 aa16.7■□□□□ 0.26
CPSF1-211ENST00000533492 ALDH1A3P47895 512 aa16.7■□□□□ 0.26
CPSF1-211ENST00000533492 TAF6P49848 677 aa16.7■□□□□ 0.26
CPSF1-211ENST00000533492 CASP5P51878 434 aa16.7■□□□□ 0.26
CPSF1-211ENST00000533492 EPHB3P54753 998 aa16.7■□□□□ 0.26
CPSF1-211ENST00000533492 PFKPQ01813 784 aa16.7■□□□□ 0.26
CPSF1-211ENST00000533492 DUSP4Q13115 394 aa16.7■□□□□ 0.26
CPSF1-211ENST00000533492 PLD1Q13393 1074 aa16.7■□□□□ 0.26
CPSF1-211ENST00000533492 PRSS36Q5K4E3 855 aa16.7■□□□□ 0.26
CPSF1-211ENST00000533492 PHLDB3Q6NSJ2 640 aa16.7■□□□□ 0.26
CPSF1-211ENST00000533492 HS6ST3Q8IZP7 471 aa16.7■□□□□ 0.26
CPSF1-211ENST00000533492 IQUBQ8NA54 791 aa16.7■□□□□ 0.26
CPSF1-211ENST00000533492 DTWD2Q8NBA8 298 aa16.7■□□□□ 0.26
CPSF1-211ENST00000533492 LEMD2Q8NC56 503 aa16.7■□□□□ 0.26
CPSF1-211ENST00000533492 DHX58Q96C10 678 aa16.7■□□□□ 0.26
CPSF1-211ENST00000533492 TCEAL4Q96EI5 215 aa16.7■□□□□ 0.26
CPSF1-211ENST00000533492 SAAL1Q96ER3 474 aa16.7■□□□□ 0.26
CPSF1-211ENST00000533492 CUEDC2Q9H467 287 aa16.7■□□□□ 0.26
CPSF1-211ENST00000533492 CEP72Q9P209 647 aa16.7■□□□□ 0.26
CPSF1-211ENST00000533492 YIPF1Q9Y548 306 aa16.7■□□□□ 0.26
CPSF1-211ENST00000533492 MYH15Q9Y2K3 1946 aa16.69■□□□□ 0.26
CPSF1-211ENST00000533492 ECI2O75521 394 aa16.69■□□□□ 0.26
CPSF1-211ENST00000533492 TFAMQ00059 246 aaKnown RBP16.69■□□□□ 0.26
CPSF1-211ENST00000533492 SNW1Q13573 536 aaKnown RBP16.69■□□□□ 0.26
CPSF1-211ENST00000533492 SLC44A4Q53GD3 710 aa16.69■□□□□ 0.26
CPSF1-211ENST00000533492 EFCAB13Q8IY85 973 aa16.69■□□□□ 0.26
CPSF1-211ENST00000533492 CCDC105Q8IYK2 499 aa16.69■□□□□ 0.26
CPSF1-211ENST00000533492 THEM5Q8N1Q8 247 aa16.69■□□□□ 0.26
CPSF1-211ENST00000533492 SPRYD3Q8NCJ5 442 aa16.69■□□□□ 0.26
CPSF1-211ENST00000533492 CACTINQ8WUQ7 758 aaKnown RBP16.69■□□□□ 0.26
CPSF1-211ENST00000533492 PYM1Q9BRP8 204 aaKnown RBP16.69■□□□□ 0.26
CPSF1-211ENST00000533492 PCIF1Q9H4Z3 704 aa16.69■□□□□ 0.26
CPSF1-211ENST00000533492 ZFP14Q9HCL3 533 aa16.69■□□□□ 0.26
CPSF1-211ENST00000533492 RBAKQ9NYW8 714 aaPredicted RBP16.69■□□□□ 0.26
CPSF1-211ENST00000533492 SLC27A5Q9Y2P5 690 aa16.69■□□□□ 0.26
CPSF1-211ENST00000533492 SIT1Q9Y3P8 196 aa16.69■□□□□ 0.26
CPSF1-211ENST00000533492 ANK1P16157 1881 aa16.69■□□□□ 0.26
CPSF1-211ENST00000533492 GOLGA8IPA6NC78 632 aa16.68■□□□□ 0.26
CPSF1-211ENST00000533492 GOLGA8JA6NMD2 632 aa16.68■□□□□ 0.26
CPSF1-211ENST00000533492 F13A1P00488 732 aa16.68■□□□□ 0.26
CPSF1-211ENST00000533492 CYP11A1P05108 521 aa16.68■□□□□ 0.26
CPSF1-211ENST00000533492 CCR2P41597 374 aa16.68■□□□□ 0.26
CPSF1-211ENST00000533492 ASIC1P78348 528 aa16.68■□□□□ 0.26
CPSF1-211ENST00000533492 SV2CQ496J9 727 aa16.68■□□□□ 0.26
CPSF1-211ENST00000533492 TANGO2Q6ICL3 276 aa16.68■□□□□ 0.26
CPSF1-211ENST00000533492 CENPPQ6IPU0 288 aa16.68■□□□□ 0.26
CPSF1-211ENST00000533492 BRSK2Q8IWQ3 736 aa16.68■□□□□ 0.26
CPSF1-211ENST00000533492 ATAD1Q8NBU5 361 aa16.68■□□□□ 0.26
CPSF1-211ENST00000533492 KCNG4Q8TDN1 519 aa16.68■□□□□ 0.26
CPSF1-211ENST00000533492 ELSPBP1Q96BH3 223 aa16.68■□□□□ 0.26
CPSF1-211ENST00000533492 ZNF560Q96MR9 790 aa16.68■□□□□ 0.26
CPSF1-211ENST00000533492 FGFBP2Q9BYJ0 223 aa16.68■□□□□ 0.26
CPSF1-211ENST00000533492 KBTBD4Q9NVX7 518 aa16.68■□□□□ 0.26
CPSF1-211ENST00000533492 SCN1AP35498 2009 aa16.68■□□□□ 0.26
CPSF1-211ENST00000533492 MTMR11A4FU01 709 aa16.67■□□□□ 0.26
CPSF1-211ENST00000533492 KPNA7A9QM74 516 aa16.67■□□□□ 0.26
CPSF1-211ENST00000533492 EXTL3O43909 919 aa16.67■□□□□ 0.26
CPSF1-211ENST00000533492 DCNP07585 359 aaKnown RBP16.67■□□□□ 0.26
CPSF1-211ENST00000533492 PNPLA4P41247 253 aa16.67■□□□□ 0.26
CPSF1-211ENST00000533492 ME1P48163 572 aa16.67■□□□□ 0.26
CPSF1-211ENST00000533492 STARD6P59095 220 aa16.67■□□□□ 0.26
CPSF1-211ENST00000533492 PRKCQQ04759 706 aa16.67■□□□□ 0.26
CPSF1-211ENST00000533492 ANGPT1Q15389 498 aa16.67■□□□□ 0.26
CPSF1-211ENST00000533492 MLF2Q15773 248 aaPredicted RBP16.67■□□□□ 0.26
CPSF1-211ENST00000533492 E2F4Q16254 413 aa16.67■□□□□ 0.26
CPSF1-211ENST00000533492 FAM78AQ5JUQ0 283 aa16.67■□□□□ 0.26
CPSF1-211ENST00000533492 SHC4Q6S5L8 630 aa16.67■□□□□ 0.26
CPSF1-211ENST00000533492 ZSWIM2Q8NEG5 633 aa16.67■□□□□ 0.26
CPSF1-211ENST00000533492 TMEM209Q96SK2 561 aa16.67■□□□□ 0.26
CPSF1-211ENST00000533492 CBWD1Q9BRT8 395 aa16.67■□□□□ 0.26
CPSF1-211ENST00000533492 PLA2G2FQ9BZM2 168 aa16.67■□□□□ 0.26
CPSF1-211ENST00000533492 TRIM9Q9C026 710 aa16.67■□□□□ 0.26
CPSF1-211ENST00000533492 GPR88Q9GZN0 384 aa16.67■□□□□ 0.26
CPSF1-211ENST00000533492 CRISPLD1Q9H336 500 aa16.67■□□□□ 0.26
CPSF1-211ENST00000533492 SLITRK6Q9H5Y7 841 aa16.67■□□□□ 0.26
CPSF1-211ENST00000533492 FAM13BQ9NYF5 915 aa16.67■□□□□ 0.26
CPSF1-211ENST00000533492 CFAP45Q9UL16 551 aa16.67■□□□□ 0.26
CPSF1-211ENST00000533492 R3HCC1Q9Y3T6 440 aaKnown RBP16.67■□□□□ 0.26
CPSF1-211ENST00000533492 ASB3Q9Y575 518 aa16.67■□□□□ 0.26
CPSF1-211ENST00000533492 KIAA0391O15091 583 aaKnown RBP16.66■□□□□ 0.26
CPSF1-211ENST00000533492 POLR2DO15514 142 aaKnown RBP16.66■□□□□ 0.26
CPSF1-211ENST00000533492 VNN2O95498 520 aa16.66■□□□□ 0.26
CPSF1-211ENST00000533492 GJA1P17302 382 aa16.66■□□□□ 0.26
CPSF1-211ENST00000533492 TUFMP49411 452 aaKnown RBP16.66■□□□□ 0.26
CPSF1-211ENST00000533492 EPHA5P54756 1037 aa16.66■□□□□ 0.26
CPSF1-211ENST00000533492 TEAD2Q15562 447 aa16.66■□□□□ 0.26
CPSF1-211ENST00000533492 SLC39A12Q504Y0 691 aa16.66■□□□□ 0.26
CPSF1-211ENST00000533492 WSCD1Q658N2 575 aa16.66■□□□□ 0.26
CPSF1-211ENST00000533492 ATL3Q6DD88 541 aa16.66■□□□□ 0.26
CPSF1-211ENST00000533492 POTEHQ6S545 545 aa16.66■□□□□ 0.26
CPSF1-211ENST00000533492 GPD1LQ8N335 351 aa16.66■□□□□ 0.26
CPSF1-211ENST00000533492 OR10T2Q8NGX3 314 aa16.66■□□□□ 0.26
CPSF1-211ENST00000533492 FAM200AQ8TCP9 573 aa16.66■□□□□ 0.26
CPSF1-211ENST00000533492 SMARCD2Q92925 531 aa16.66■□□□□ 0.26
CPSF1-211ENST00000533492 HPS3Q969F9 1004 aa16.66■□□□□ 0.26
CPSF1-211ENST00000533492 ASB16Q96NS5 453 aa16.66■□□□□ 0.26
CPSF1-211ENST00000533492 FOXQ1Q9C009 403 aa16.66■□□□□ 0.26
CPSF1-211ENST00000533492 ZCWPW1Q9H0M4 648 aa16.66■□□□□ 0.26
CPSF1-211ENST00000533492 HSFX1Q9UBD0 423 aa16.66■□□□□ 0.26
CPSF1-211ENST00000533492 AGAP1Q9UPQ3 857 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms