RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 ASPHQ12797 758 aa13.08□□□□□ -0.32
RAD50-209ENST00000533482 FAXCQ5TGI0 409 aa13.08□□□□□ -0.32
RAD50-209ENST00000533482 NT5DC3Q86UY8 548 aa13.08□□□□□ -0.32
RAD50-209ENST00000533482 COPS5Q92905 334 aa13.08□□□□□ -0.32
RAD50-209ENST00000533482 TTC25Q96NG3 672 aa13.08□□□□□ -0.32
RAD50-209ENST00000533482 DNAJC18Q9H819 358 aa13.08□□□□□ -0.32
RAD50-209ENST00000533482 ANKRD63C9JTQ0 380 aa13.08□□□□□ -0.32
RAD50-209ENST00000533482 RAP1GAPP47736 663 aa13.08□□□□□ -0.32
RAD50-209ENST00000533482 RCOR2Q8IZ40 523 aa13.08□□□□□ -0.32
RAD50-209ENST00000533482 N4BP2L2Q92802 583 aaPredicted RBP13.08□□□□□ -0.32
RAD50-209ENST00000533482 HPDLQ96IR7 371 aa13.08□□□□□ -0.32
RAD50-209ENST00000533482 ECT2Q9H8V3 914 aa13.08□□□□□ -0.32
RAD50-209ENST00000533482 KLC4Q9NSK0 619 aa13.08□□□□□ -0.32
RAD50-209ENST00000533482 PJA2O43164 708 aa13.07□□□□□ -0.32
RAD50-209ENST00000533482 AP1B1Q10567 949 aa13.07□□□□□ -0.32
RAD50-209ENST00000533482 TAF11Q15544 211 aa13.07□□□□□ -0.32
RAD50-209ENST00000533482 TRMT10CQ7L0Y3 403 aaKnown RBP13.07□□□□□ -0.32
RAD50-209ENST00000533482 SPATA21Q7Z572 469 aa13.07□□□□□ -0.32
RAD50-209ENST00000533482 RYBPQ8N488 228 aaPredicted RBP13.07□□□□□ -0.32
RAD50-209ENST00000533482 RAPGEF5Q92565 580 aa13.07□□□□□ -0.32
RAD50-209ENST00000533482 FHDC1Q9C0D6 1143 aaPredicted RBP13.07□□□□□ -0.32
RAD50-209ENST00000533482 ASCC2Q9H1I8 757 aaPredicted RBP13.07□□□□□ -0.32
RAD50-209ENST00000533482 PFDN4Q9NQP4 134 aa13.07□□□□□ -0.32
RAD50-209ENST00000533482 TLK1Q9UKI8 766 aa13.07□□□□□ -0.32
RAD50-209ENST00000533482 LPXNO60711 386 aa13.07□□□□□ -0.32
RAD50-209ENST00000533482 GPC4O75487 556 aa13.07□□□□□ -0.32
RAD50-209ENST00000533482 PSMD10O75832 226 aa13.07□□□□□ -0.32
RAD50-209ENST00000533482 CETPP11597 493 aa13.07□□□□□ -0.32
RAD50-209ENST00000533482 GCKP35557 465 aa13.07□□□□□ -0.32
RAD50-209ENST00000533482 STAT4Q14765 748 aa13.07□□□□□ -0.32
RAD50-209ENST00000533482 LRRC34Q8IZ02 419 aa13.07□□□□□ -0.32
RAD50-209ENST00000533482 EMC1Q8N766 993 aa13.07□□□□□ -0.32
RAD50-209ENST00000533482 GBP7Q8N8V2 638 aaPredicted RBP13.07□□□□□ -0.32
RAD50-209ENST00000533482 GABPB2Q8TAK5 448 aaPredicted RBP13.07□□□□□ -0.32
RAD50-209ENST00000533482 SPATA18Q8TC71 538 aa13.07□□□□□ -0.32
RAD50-209ENST00000533482 AGR3Q8TD06 166 aa13.07□□□□□ -0.32
RAD50-209ENST00000533482 AENQ8WTP8 325 aaKnown RBP13.07□□□□□ -0.32
RAD50-209ENST00000533482 PARK7Q99497 189 aaKnown RBP13.07□□□□□ -0.32
RAD50-209ENST00000533482 BCAS3Q9H6U6 928 aa13.07□□□□□ -0.32
RAD50-209ENST00000533482 XRN1Q8IZH2 1706 aaKnown RBP13.07□□□□□ -0.32
RAD50-209ENST00000533482 ASTN1O14525 1302 aa13.07□□□□□ -0.32
RAD50-209ENST00000533482 GTPBP10A4D1E9 387 aaKnown RBP13.07□□□□□ -0.32
RAD50-209ENST00000533482 OGTO15294 1046 aa13.07□□□□□ -0.32
RAD50-209ENST00000533482 CFLARO15519 480 aa13.07□□□□□ -0.32
RAD50-209ENST00000533482 SLC35G1Q2M3R5 365 aa13.07□□□□□ -0.32
RAD50-209ENST00000533482 AGBL2Q5U5Z8 902 aa13.07□□□□□ -0.32
RAD50-209ENST00000533482 HEATR6Q6AI08 1181 aaKnown RBP13.07□□□□□ -0.32
RAD50-209ENST00000533482 KCTD17Q8N5Z5 321 aa13.07□□□□□ -0.32
RAD50-209ENST00000533482 CDCA5Q96FF9 252 aa13.07□□□□□ -0.32
RAD50-209ENST00000533482 RANBP17Q9H2T7 1088 aaKnown RBP13.07□□□□□ -0.32
RAD50-209ENST00000533482 PRDM4Q9UKN5 801 aa13.07□□□□□ -0.32
RAD50-209ENST00000533482 RIPK3Q9Y572 518 aa13.07□□□□□ -0.32
RAD50-209ENST00000533482 GYG2O15488 501 aa13.06□□□□□ -0.32
RAD50-209ENST00000533482 TLR2O60603 784 aa13.06□□□□□ -0.32
RAD50-209ENST00000533482 CXCL8P10145 99 aa13.06□□□□□ -0.32
RAD50-209ENST00000533482 CORO7P57737 925 aa13.06□□□□□ -0.32
RAD50-209ENST00000533482 C3orf62Q6ZUJ4 267 aa13.06□□□□□ -0.32
RAD50-209ENST00000533482 NOP9Q86U38 636 aaKnown RBP13.06□□□□□ -0.32
RAD50-209ENST00000533482 SKA2Q8WVK7 121 aaPredicted RBP13.06□□□□□ -0.32
RAD50-209ENST00000533482 PRMT7Q9NVM4 692 aaPredicted RBP13.06□□□□□ -0.32
RAD50-209ENST00000533482 MARCOQ9UEW3 520 aaPredicted RBP13.06□□□□□ -0.32
RAD50-209ENST00000533482 LCMT1Q9UIC8 334 aa13.06□□□□□ -0.32
RAD50-209ENST00000533482 ZFP69BQ9UJL9 534 aa13.06□□□□□ -0.32
RAD50-209ENST00000533482 SALL4Q9UJQ4 1053 aa13.06□□□□□ -0.32
RAD50-209ENST00000533482 MAGEB2O15479 319 aa13.06□□□□□ -0.32
RAD50-209ENST00000533482 KRT38O76015 456 aa13.06□□□□□ -0.32
RAD50-209ENST00000533482 SRGAP2BP0DMP2 458 aa13.06□□□□□ -0.32
RAD50-209ENST00000533482 INSRRP14616 1297 aa13.06□□□□□ -0.32
RAD50-209ENST00000533482 CYP24A1Q07973 514 aa13.06□□□□□ -0.32
RAD50-209ENST00000533482 DNAJC3Q13217 504 aa13.06□□□□□ -0.32
RAD50-209ENST00000533482 ARL13BQ3SXY8 428 aa13.06□□□□□ -0.32
RAD50-209ENST00000533482 FAM117BQ6P1L5 589 aa13.06□□□□□ -0.32
RAD50-209ENST00000533482 TATDN1Q6P1N9 297 aa13.06□□□□□ -0.32
RAD50-209ENST00000533482 FAM71DQ8N9W8 422 aa13.06□□□□□ -0.32
RAD50-209ENST00000533482 ETNPPLQ8TBG4 499 aa13.06□□□□□ -0.32
RAD50-209ENST00000533482 GANQ9H2C0 597 aa13.06□□□□□ -0.32
RAD50-209ENST00000533482 VCX3BQ9H321 246 aa13.06□□□□□ -0.32
RAD50-209ENST00000533482 KCTD10Q9H3F6 313 aa13.06□□□□□ -0.32
RAD50-209ENST00000533482 TMBIM4Q9HC24 238 aa13.06□□□□□ -0.32
RAD50-209ENST00000533482 SETD4Q9NVD3 440 aa13.06□□□□□ -0.32
RAD50-209ENST00000533482 DDX56Q9NY93 547 aaKnown RBP13.06□□□□□ -0.32
RAD50-209ENST00000533482 CPSF3Q9UKF6 684 aaKnown RBP13.06□□□□□ -0.32
RAD50-209ENST00000533482 E2F8A0AVK6 867 aa13.06□□□□□ -0.32
RAD50-209ENST00000533482 PRPSAP1Q14558 356 aa13.06□□□□□ -0.32
RAD50-209ENST00000533482 KLHL38Q2WGJ6 581 aa13.06□□□□□ -0.32
RAD50-209ENST00000533482 KDM7AQ6ZMT4 941 aa13.06□□□□□ -0.32
RAD50-209ENST00000533482 APTXQ7Z2E3 356 aaKnown RBP13.06□□□□□ -0.32
RAD50-209ENST00000533482 MYLK4Q86YV6 388 aaPredicted RBP13.06□□□□□ -0.32
RAD50-209ENST00000533482 CLMNQ96JQ2 1002 aa13.06□□□□□ -0.32
RAD50-209ENST00000533482 OSMRQ99650 979 aa13.06□□□□□ -0.32
RAD50-209ENST00000533482 CCDC68Q9H2F9 335 aa13.06□□□□□ -0.32
RAD50-209ENST00000533482 GZMAP12544 262 aa13.06□□□□□ -0.32
RAD50-209ENST00000533482 TPD52P55327 224 aaPredicted RBP13.06□□□□□ -0.32
RAD50-209ENST00000533482 LAMC2Q13753 1193 aa13.06□□□□□ -0.32
RAD50-209ENST00000533482 MFSD14CQ5VZR4 134 aa13.06□□□□□ -0.32
RAD50-209ENST00000533482 AFAP1L2Q8N4X5 818 aa13.06□□□□□ -0.32
RAD50-209ENST00000533482 RDM1Q8NG50 284 aa13.06□□□□□ -0.32
RAD50-209ENST00000533482 PARD3BQ8TEW8 1205 aa13.06□□□□□ -0.32
RAD50-209ENST00000533482 VCXQ9H320 206 aa13.06□□□□□ -0.32
RAD50-209ENST00000533482 PCDHGC5Q9Y5F6 944 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms