RNA–Protein interactions for RNA: ENST00000533249.5

PKP3-210, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 1,111 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-210ENST00000533249 KCNN1Q92952 543 aa24.8■■□□□ 1.56
PKP3-210ENST00000533249 DNAJC25Q9H1X3 360 aa24.8■■□□□ 1.56
PKP3-210ENST00000533249 SLC27A5Q9Y2P5 690 aa24.8■■□□□ 1.56
PKP3-210ENST00000533249 PIAS3Q9Y6X2 628 aa24.8■■□□□ 1.56
PKP3-210ENST00000533249 A0A0B4J269 797 aa24.79■■□□□ 1.56
PKP3-210ENST00000533249 HEPACAM2A8MVW5 462 aa24.79■■□□□ 1.56
PKP3-210ENST00000533249 TYMPP19971 482 aa24.79■■□□□ 1.56
PKP3-210ENST00000533249 ALDH1A3P47895 512 aa24.79■■□□□ 1.56
PKP3-210ENST00000533249 ZNF131P52739 623 aa24.79■■□□□ 1.56
PKP3-210ENST00000533249 GRIN1Q05586 938 aa24.79■■□□□ 1.56
PKP3-210ENST00000533249 LARP1BQ659C4 914 aaKnown RBP24.79■■□□□ 1.56
PKP3-210ENST00000533249 SLC39A4Q6P5W5 647 aa24.79■■□□□ 1.56
PKP3-210ENST00000533249 TMC8Q8IU68 726 aa24.79■■□□□ 1.56
PKP3-210ENST00000533249 MFSD6LQ8IWD5 586 aa24.79■■□□□ 1.56
PKP3-210ENST00000533249 ATAD1Q8NBU5 361 aa24.79■■□□□ 1.56
PKP3-210ENST00000533249 ZBTB44Q8NCP5 570 aa24.79■■□□□ 1.56
PKP3-210ENST00000533249 FAM3CQ92520 227 aa24.79■■□□□ 1.56
PKP3-210ENST00000533249 RAD54LQ92698 747 aa24.79■■□□□ 1.56
PKP3-210ENST00000533249 SENP8Q96LD8 212 aa24.79■■□□□ 1.56
PKP3-210ENST00000533249 TMEM209Q96SK2 561 aa24.79■■□□□ 1.56
PKP3-210ENST00000533249 LRRC3Q9BY71 257 aa24.79■■□□□ 1.56
PKP3-210ENST00000533249 GPR88Q9GZN0 384 aa24.79■■□□□ 1.56
PKP3-210ENST00000533249 TRPV4Q9HBA0 871 aa24.79■■□□□ 1.56
PKP3-210ENST00000533249 PRMT8Q9NR22 394 aaPredicted RBP24.79■■□□□ 1.56
PKP3-210ENST00000533249 MTMR11A4FU01 709 aa24.78■■□□□ 1.56
PKP3-210ENST00000533249 TBCAO75347 108 aaKnown RBP24.78■■□□□ 1.56
PKP3-210ENST00000533249 ADRB2P07550 413 aa24.78■■□□□ 1.56
PKP3-210ENST00000533249 NFICP08651 508 aa24.78■■□□□ 1.56
PKP3-210ENST00000533249 ODC1P11926 461 aa24.78■■□□□ 1.56
PKP3-210ENST00000533249 SCP2P22307 547 aa24.78■■□□□ 1.56
PKP3-210ENST00000533249 NMT1P30419 496 aaKnown RBP24.78■■□□□ 1.56
PKP3-210ENST00000533249 LILRA4P59901 499 aa24.78■■□□□ 1.56
PKP3-210ENST00000533249 CENPPQ6IPU0 288 aa24.78■■□□□ 1.56
PKP3-210ENST00000533249 GPIHBP1Q8IV16 184 aa24.78■■□□□ 1.56
PKP3-210ENST00000533249 ZNF687Q8N1G0 1237 aa24.78■■□□□ 1.56
PKP3-210ENST00000533249 TTC9BQ8N6N2 239 aa24.78■■□□□ 1.56
PKP3-210ENST00000533249 BORCS6Q96GS4 357 aa24.78■■□□□ 1.56
PKP3-210ENST00000533249 TSPAN18Q96SJ8 248 aa24.78■■□□□ 1.56
PKP3-210ENST00000533249 TRPV5Q9NQA5 729 aa24.78■■□□□ 1.56
PKP3-210ENST00000533249 CPSF3Q9UKF6 684 aaKnown RBP24.78■■□□□ 1.56
PKP3-210ENST00000533249 DMXL1Q9Y485 3027 aa24.78■■□□□ 1.56
PKP3-210ENST00000533249 ANK1P16157 1881 aa24.77■■□□□ 1.56
PKP3-210ENST00000533249 FRYLO94915 3013 aa24.77■■□□□ 1.56
PKP3-210ENST00000533249 SOAT2O75908 522 aa24.77■■□□□ 1.56
PKP3-210ENST00000533249 MYBPC2Q14324 1141 aa24.77■■□□□ 1.56
PKP3-210ENST00000533249 STXBP5Q5T5C0 1151 aa24.77■■□□□ 1.56
PKP3-210ENST00000533249 ARMCX5Q6P1M9 558 aa24.77■■□□□ 1.56
PKP3-210ENST00000533249 CD302Q8IX05 232 aa24.77■■□□□ 1.56
PKP3-210ENST00000533249 YAF2Q8IY57 180 aa24.77■■□□□ 1.56
PKP3-210ENST00000533249 NELL1Q92832 810 aa24.77■■□□□ 1.56
PKP3-210ENST00000533249 RSPRY1Q96DX4 576 aa24.77■■□□□ 1.56
PKP3-210ENST00000533249 CHRDQ9H2X0 955 aa24.77■■□□□ 1.56
PKP3-210ENST00000533249 LMAN1LQ9HAT1 526 aa24.77■■□□□ 1.56
PKP3-210ENST00000533249 SMG5Q9UPR3 1016 aaKnown RBP24.77■■□□□ 1.56
PKP3-210ENST00000533249 CACNA1AO00555 2505 aa24.76■■□□□ 1.55
PKP3-210ENST00000533249 ANKRD63C9JTQ0 380 aa24.76■■□□□ 1.55
PKP3-210ENST00000533249 BMP15O95972 392 aa24.76■■□□□ 1.55
PKP3-210ENST00000533249 LONP1P36776 959 aaKnown RBP24.76■■□□□ 1.55
PKP3-210ENST00000533249 ACOT2P49753 483 aa24.76■■□□□ 1.55
PKP3-210ENST00000533249 CDR1P51861 262 aa24.76■■□□□ 1.55
PKP3-210ENST00000533249 TMEM132DQ14C87 1099 aa24.76■■□□□ 1.55
PKP3-210ENST00000533249 ZC2HC1CQ53FD0 456 aaPredicted RBP24.76■■□□□ 1.55
PKP3-210ENST00000533249 C9orf57Q5W0N0 161 aa24.76■■□□□ 1.55
PKP3-210ENST00000533249 DGLUCYQ7Z3D6 616 aa24.76■■□□□ 1.55
PKP3-210ENST00000533249 CSGALNACT1Q8TDX6 532 aa24.76■■□□□ 1.55
PKP3-210ENST00000533249 E2F7Q96AV8 911 aa24.76■■□□□ 1.55
PKP3-210ENST00000533249 FIZ1Q96SL8 496 aa24.76■■□□□ 1.55
PKP3-210ENST00000533249 CEP250Q9BV73 2442 aa24.76■■□□□ 1.55
PKP3-210ENST00000533249 TISP43B9A030 160 aa24.75■■□□□ 1.55
PKP3-210ENST00000533249 LILRB5O75023 590 aa24.75■■□□□ 1.55
PKP3-210ENST00000533249 CCNE1P24864 410 aa24.75■■□□□ 1.55
PKP3-210ENST00000533249 GTF2BQ00403 316 aa24.75■■□□□ 1.55
PKP3-210ENST00000533249 SF3A1Q15459 793 aaKnown RBP24.75■■□□□ 1.55
PKP3-210ENST00000533249 LARP4BQ92615 738 aaKnown RBP24.75■■□□□ 1.55
PKP3-210ENST00000533249 EPC1Q9H2F5 836 aa24.75■■□□□ 1.55
PKP3-210ENST00000533249 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.75■■□□□ 1.55
PKP3-210ENST00000533249 TSC2P49815 1807 aa24.75■■□□□ 1.55
PKP3-210ENST00000533249 MCM2P49736 904 aa24.74■■□□□ 1.55
PKP3-210ENST00000533249 PUM1Q14671 1186 aaKnown RBP eCLIP24.74■■□□□ 1.55
PKP3-210ENST00000533249 ADALQ6DHV7 355 aa24.74■■□□□ 1.55
PKP3-210ENST00000533249 BRAPQ7Z569 592 aa24.74■■□□□ 1.55
PKP3-210ENST00000533249 DNAJB7Q7Z6W7 309 aaPredicted RBP24.74■■□□□ 1.55
PKP3-210ENST00000533249 ARID3BQ8IVW6 561 aaPredicted RBP24.74■■□□□ 1.55
PKP3-210ENST00000533249 OR10T2Q8NGX3 314 aa24.74■■□□□ 1.55
PKP3-210ENST00000533249 ATXN3LQ9H3M9 355 aa24.74■■□□□ 1.55
PKP3-210ENST00000533249 ASB3Q9Y575 518 aa24.74■■□□□ 1.55
PKP3-210ENST00000533249 SLC38A8A6NNN8 435 aa24.73■■□□□ 1.55
PKP3-210ENST00000533249 ARNTLO00327 626 aa24.73■■□□□ 1.55
PKP3-210ENST00000533249 PIRO00625 290 aa24.73■■□□□ 1.55
PKP3-210ENST00000533249 GABRR2P28476 465 aa24.73■■□□□ 1.55
PKP3-210ENST00000533249 ABCD1P33897 745 aa24.73■■□□□ 1.55
PKP3-210ENST00000533249 KPNA1P52294 538 aaPredicted RBP24.73■■□□□ 1.55
PKP3-210ENST00000533249 SLC39A12Q504Y0 691 aa24.73■■□□□ 1.55
PKP3-210ENST00000533249 GAREM2Q75VX8 874 aa24.73■■□□□ 1.55
PKP3-210ENST00000533249 FAM200AQ8TCP9 573 aa24.73■■□□□ 1.55
PKP3-210ENST00000533249 SECISBP2LQ93073 1101 aaKnown RBP24.73■■□□□ 1.55
PKP3-210ENST00000533249 PSMG2Q969U7 264 aa24.73■■□□□ 1.55
PKP3-210ENST00000533249 SEPT5Q99719 369 aaPredicted RBP24.73■■□□□ 1.55
PKP3-210ENST00000533249 FAM126AQ9BYI3 521 aaPredicted RBP24.73■■□□□ 1.55
PKP3-210ENST00000533249 DERAQ9Y315 318 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms