RNA–Protein interactions for RNA: ENST00000533189.1

CTNND1-235, Transcript of catenin delta 1, humanhuman

TSL 3

Gene CTNND1, Length 498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-235ENST00000533189 ATXN3LQ9H3M9 355 aa11.66□□□□□ -0.54
CTNND1-235ENST00000533189 SMOC1Q9H4F8 434 aa11.66□□□□□ -0.54
CTNND1-235ENST00000533189 THG1LQ9NWX6 298 aaKnown RBP11.66□□□□□ -0.54
CTNND1-235ENST00000533189 OBP2AQ9NY56 170 aa11.66□□□□□ -0.54
CTNND1-235ENST00000533189 CNTN3Q9P232 1028 aa11.66□□□□□ -0.54
CTNND1-235ENST00000533189 TPCN1Q9ULQ1 816 aa11.66□□□□□ -0.54
CTNND1-235ENST00000533189 ASB3Q9Y575 518 aa11.66□□□□□ -0.54
CTNND1-235ENST00000533189 C1QTNF9BB2RNN3 333 aa11.65□□□□□ -0.54
CTNND1-235ENST00000533189 CTDNEP1O95476 244 aa11.65□□□□□ -0.54
CTNND1-235ENST00000533189 C1QTNF9P0C862 333 aa11.65□□□□□ -0.54
CTNND1-235ENST00000533189 MUTP22033 750 aa11.65□□□□□ -0.54
CTNND1-235ENST00000533189 NOVA1P51513 510 aaKnown RBP11.65□□□□□ -0.54
CTNND1-235ENST00000533189 FOSBP53539 338 aa11.65□□□□□ -0.54
CTNND1-235ENST00000533189 PEX3P56589 373 aa11.65□□□□□ -0.54
CTNND1-235ENST00000533189 TNK2Q07912 1038 aa11.65□□□□□ -0.54
CTNND1-235ENST00000533189 DUSP4Q13115 394 aa11.65□□□□□ -0.54
CTNND1-235ENST00000533189 ITPRIPL2Q3MIP1 535 aa11.65□□□□□ -0.54
CTNND1-235ENST00000533189 GPR158Q5T848 1215 aa11.65□□□□□ -0.54
CTNND1-235ENST00000533189 HAUS3Q68CZ6 603 aa11.65□□□□□ -0.54
CTNND1-235ENST00000533189 MPZL3Q6UWV2 235 aa11.65□□□□□ -0.54
CTNND1-235ENST00000533189 BEST2Q8NFU1 509 aa11.65□□□□□ -0.54
CTNND1-235ENST00000533189 BPIFB1Q8TDL5 484 aa11.65□□□□□ -0.54
CTNND1-235ENST00000533189 TMEM209Q96SK2 561 aa11.65□□□□□ -0.54
CTNND1-235ENST00000533189 TARS2Q9BW92 718 aaKnown RBP11.65□□□□□ -0.54
CTNND1-235ENST00000533189 DNAJC25Q9H1X3 360 aa11.65□□□□□ -0.54
CTNND1-235ENST00000533189 BHMT2Q9H2M3 363 aa11.65□□□□□ -0.54
CTNND1-235ENST00000533189 TMEM134Q9H6X4 195 aa11.65□□□□□ -0.54
CTNND1-235ENST00000533189 PTPRHQ9HD43 1115 aa11.65□□□□□ -0.54
CTNND1-235ENST00000533189 ZMIZ1Q9ULJ6 1067 aa11.65□□□□□ -0.54
CTNND1-235ENST00000533189 ASPMQ8IZT6 3477 aa11.65□□□□□ -0.54
CTNND1-235ENST00000533189 PKD1L2Q7Z442 2459 aa11.64□□□□□ -0.55
CTNND1-235ENST00000533189 NUP205Q92621 2012 aa11.64□□□□□ -0.55
CTNND1-235ENST00000533189 DSPP15924 2871 aaKnown RBP11.64□□□□□ -0.55
CTNND1-235ENST00000533189 OR6C75A6NL08 312 aa11.64□□□□□ -0.55
CTNND1-235ENST00000533189 OR4Q2P0C623 313 aa11.64□□□□□ -0.55
CTNND1-235ENST00000533189 FDPSP14324 419 aaKnown RBP11.64□□□□□ -0.55
CTNND1-235ENST00000533189 GABRR2P28476 465 aa11.64□□□□□ -0.55
CTNND1-235ENST00000533189 CCT6AP40227 531 aaKnown RBP11.64□□□□□ -0.55
CTNND1-235ENST00000533189 NPTX2P47972 431 aa11.64□□□□□ -0.55
CTNND1-235ENST00000533189 MCM2P49736 904 aa11.64□□□□□ -0.55
CTNND1-235ENST00000533189 GRSF1Q12849 480 aaKnown RBP eCLIP11.64□□□□□ -0.55
CTNND1-235ENST00000533189 FOXC1Q12948 553 aa11.64□□□□□ -0.55
CTNND1-235ENST00000533189 DMP1Q13316 513 aaPredicted RBP11.64□□□□□ -0.55
CTNND1-235ENST00000533189 ELF2Q15723 593 aa11.64□□□□□ -0.55
CTNND1-235ENST00000533189 DAB2IPQ5VWQ8 1189 aa11.64□□□□□ -0.55
CTNND1-235ENST00000533189 PKN3Q6P5Z2 889 aa11.64□□□□□ -0.55
CTNND1-235ENST00000533189 ITIH5Q86UX2 942 aa11.64□□□□□ -0.55
CTNND1-235ENST00000533189 CAMKK1Q8N5S9 505 aa11.64□□□□□ -0.55
CTNND1-235ENST00000533189 PSMG2Q969U7 264 aa11.64□□□□□ -0.55
CTNND1-235ENST00000533189 ZC3H10Q96K80 434 aaKnown RBP11.64□□□□□ -0.55
CTNND1-235ENST00000533189 LRRC3BQ96PB8 259 aa11.64□□□□□ -0.55
CTNND1-235ENST00000533189 GCNAQ96QF7 691 aa11.64□□□□□ -0.55
CTNND1-235ENST00000533189 MKNK1Q9BUB5 465 aa11.64□□□□□ -0.55
CTNND1-235ENST00000533189 EDEM2Q9BV94 578 aa11.64□□□□□ -0.55
CTNND1-235ENST00000533189 KMT5AQ9NQR1 393 aa11.64□□□□□ -0.55
CTNND1-235ENST00000533189 TUBGCP4Q9UGJ1 667 aa11.64□□□□□ -0.55
CTNND1-235ENST00000533189 SLC27A5Q9Y2P5 690 aa11.64□□□□□ -0.55
CTNND1-235ENST00000533189 TIMM13Q9Y5L4 95 aaPredicted RBP11.64□□□□□ -0.55
CTNND1-235ENST00000533189 AKAP13Q12802 2813 aa11.64□□□□□ -0.55
CTNND1-235ENST00000533189 MYH11P35749 1972 aa11.64□□□□□ -0.55
CTNND1-235ENST00000533189 SPEGQ15772 3267 aa11.64□□□□□ -0.55
CTNND1-235ENST00000533189 M0QZQ0 153 aa11.63□□□□□ -0.55
CTNND1-235ENST00000533189 RHOBTB1O94844 696 aa11.63□□□□□ -0.55
CTNND1-235ENST00000533189 OAZ2O95190 189 aa11.63□□□□□ -0.55
CTNND1-235ENST00000533189 VNN2O95498 520 aa11.63□□□□□ -0.55
CTNND1-235ENST00000533189 OR52Z1P0C646 297 aa11.63□□□□□ -0.55
CTNND1-235ENST00000533189 PROZP22891 400 aa11.63□□□□□ -0.55
CTNND1-235ENST00000533189 CACNB1Q02641 598 aaPredicted RBP11.63□□□□□ -0.55
CTNND1-235ENST00000533189 ZNF252P-AS1Q0IIN9 211 aa11.63□□□□□ -0.55
CTNND1-235ENST00000533189 GPR17Q13304 367 aa11.63□□□□□ -0.55
CTNND1-235ENST00000533189 KARSQ15046 597 aaKnown RBP11.63□□□□□ -0.55
CTNND1-235ENST00000533189 ANKRD1Q15327 319 aa11.63□□□□□ -0.55
CTNND1-235ENST00000533189 PLK5Q496M5 336 aa11.63□□□□□ -0.55
CTNND1-235ENST00000533189 CENPPQ6IPU0 288 aa11.63□□□□□ -0.55
CTNND1-235ENST00000533189 TCEAL6Q6IPX3 200 aa11.63□□□□□ -0.55
CTNND1-235ENST00000533189 DSTYKQ6XUX3 929 aa11.63□□□□□ -0.55
CTNND1-235ENST00000533189 GAREM2Q75VX8 874 aa11.63□□□□□ -0.55
CTNND1-235ENST00000533189 DNAJB7Q7Z6W7 309 aaPredicted RBP11.63□□□□□ -0.55
CTNND1-235ENST00000533189 TCEAL3Q969E4 200 aa11.63□□□□□ -0.55
CTNND1-235ENST00000533189 CRISPLD1Q9H336 500 aa11.63□□□□□ -0.55
CTNND1-235ENST00000533189 TASP1Q9H6P5 420 aa11.63□□□□□ -0.55
CTNND1-235ENST00000533189 ANKFY1Q9P2R3 1169 aa11.63□□□□□ -0.55
CTNND1-235ENST00000533189 RBM19Q9Y4C8 960 aaKnown RBP11.63□□□□□ -0.55
CTNND1-235ENST00000533189 DENND4CQ5VZ89 1909 aa11.62□□□□□ -0.55
CTNND1-235ENST00000533189 ANK1P16157 1881 aa11.62□□□□□ -0.55
CTNND1-235ENST00000533189 THADAQ6YHU6 1953 aa11.62□□□□□ -0.55
CTNND1-235ENST00000533189 MTMR11A4FU01 709 aa11.62□□□□□ -0.55
CTNND1-235ENST00000533189 TMEM8BA6NDV4 472 aa11.62□□□□□ -0.55
CTNND1-235ENST00000533189 C4orf47A7E2U8 309 aa11.62□□□□□ -0.55
CTNND1-235ENST00000533189 PRAMEF12O95522 483 aa11.62□□□□□ -0.55
CTNND1-235ENST00000533189 CAVIN2O95810 425 aa11.62□□□□□ -0.55
CTNND1-235ENST00000533189 WEE1P30291 646 aa11.62□□□□□ -0.55
CTNND1-235ENST00000533189 MATR3P43243 847 aaKnown RBP eCLIP11.62□□□□□ -0.551e-6■■■■■ 28.6
CTNND1-235ENST00000533189 CYP4F8P98187 520 aa11.62□□□□□ -0.55
CTNND1-235ENST00000533189 AMPD2Q01433 879 aa11.62□□□□□ -0.55
CTNND1-235ENST00000533189 CREB5Q02930 508 aa11.62□□□□□ -0.55
CTNND1-235ENST00000533189 STRN3Q13033 797 aa11.62□□□□□ -0.55
CTNND1-235ENST00000533189 MYBPC2Q14324 1141 aa11.62□□□□□ -0.55
CTNND1-235ENST00000533189 NOLC1Q14978 699 aaKnown RBP eCLIP11.62□□□□□ -0.55
CTNND1-235ENST00000533189 VEPH1Q14D04 833 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms