RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 ZNF233A6NK53 670 aa32.7■■■□□ 2.83
SSSCA1-207ENST00000533115 CYB561D2O14569 222 aa32.7■■■□□ 2.83
SSSCA1-207ENST00000533115 PTPN2P17706 415 aa32.7■■■□□ 2.83
SSSCA1-207ENST00000533115 GPR17Q13304 367 aa32.7■■■□□ 2.83
SSSCA1-207ENST00000533115 SV2CQ496J9 727 aa32.7■■■□□ 2.83
SSSCA1-207ENST00000533115 SUGP1Q8IWZ8 645 aaKnown RBP32.7■■■□□ 2.83
SSSCA1-207ENST00000533115 C1orf127Q8N9H9 656 aa32.7■■■□□ 2.83
SSSCA1-207ENST00000533115 FGF13Q92913 245 aa32.7■■■□□ 2.83
SSSCA1-207ENST00000533115 BORCS6Q96GS4 357 aa32.7■■■□□ 2.83
SSSCA1-207ENST00000533115 KIAA1586Q9HCI6 787 aa32.7■■■□□ 2.83
SSSCA1-207ENST00000533115 NOTCH4Q99466 2003 aa32.7■■■□□ 2.82
SSSCA1-207ENST00000533115 FAM237AA0A1B0GTK4 181 aa32.69■■■□□ 2.82
SSSCA1-207ENST00000533115 KPNA7A9QM74 516 aa32.69■■■□□ 2.82
SSSCA1-207ENST00000533115 KLRC4O43908 158 aa32.69■■■□□ 2.82
SSSCA1-207ENST00000533115 ITGB3P05106 788 aa32.69■■■□□ 2.82
SSSCA1-207ENST00000533115 RHOP08100 348 aa32.69■■■□□ 2.82
SSSCA1-207ENST00000533115 PNPLA4P41247 253 aa32.69■■■□□ 2.82
SSSCA1-207ENST00000533115 SNRPFP62306 86 aaKnown RBP32.69■■■□□ 2.82
SSSCA1-207ENST00000533115 BMT2Q1RMZ1 405 aa32.69■■■□□ 2.82
SSSCA1-207ENST00000533115 CBWD2Q8IUF1 395 aa32.69■■■□□ 2.82
SSSCA1-207ENST00000533115 AVENQ9NQS1 362 aaPredicted RBP32.69■■■□□ 2.82
SSSCA1-207ENST00000533115 AGAP1Q9UPQ3 857 aa32.69■■■□□ 2.82
SSSCA1-207ENST00000533115 TSC2P49815 1807 aa32.69■■■□□ 2.82
SSSCA1-207ENST00000533115 ANHXE9PGG2 379 aa32.68■■■□□ 2.82
SSSCA1-207ENST00000533115 VNN2O95498 520 aa32.68■■■□□ 2.82
SSSCA1-207ENST00000533115 POLR2BP30876 1174 aaKnown RBP32.68■■■□□ 2.82
SSSCA1-207ENST00000533115 SYKP43405 635 aa32.68■■■□□ 2.82
SSSCA1-207ENST00000533115 NDUFA8P51970 172 aa32.68■■■□□ 2.82
SSSCA1-207ENST00000533115 METTL23Q86XA0 190 aa32.68■■■□□ 2.82
SSSCA1-207ENST00000533115 SLC44A3Q8N4M1 653 aa32.68■■■□□ 2.82
SSSCA1-207ENST00000533115 PGLYRP2Q96PD5 576 aa32.68■■■□□ 2.82
SSSCA1-207ENST00000533115 ITGA11Q9UKX5 1188 aa32.68■■■□□ 2.82
SSSCA1-207ENST00000533115 MRPS23Q9Y3D9 190 aaKnown RBP32.68■■■□□ 2.82
SSSCA1-207ENST00000533115 ZNF318Q5VUA4 2279 aa32.67■■■□□ 2.82
SSSCA1-207ENST00000533115 A0A1W2PQ27 194 aa32.67■■■□□ 2.82
SSSCA1-207ENST00000533115 A0A1W2PQ64 194 aa32.67■■■□□ 2.82
SSSCA1-207ENST00000533115 A0A1W2PQD8 194 aa32.67■■■□□ 2.82
SSSCA1-207ENST00000533115 MYL1P05976 194 aa32.67■■■□□ 2.82
SSSCA1-207ENST00000533115 TWF1Q12792 350 aa32.67■■■□□ 2.82
SSSCA1-207ENST00000533115 HTR4Q13639 388 aa32.67■■■□□ 2.82
SSSCA1-207ENST00000533115 SURF1Q15526 300 aa32.67■■■□□ 2.82
SSSCA1-207ENST00000533115 HS2ST1Q7LGA3 356 aa32.67■■■□□ 2.82
SSSCA1-207ENST00000533115 ELMOD1Q8N336 334 aa32.67■■■□□ 2.82
SSSCA1-207ENST00000533115 CSGALNACT2Q8N6G5 542 aa32.67■■■□□ 2.82
SSSCA1-207ENST00000533115 FAM84AQ96KN4 292 aa32.67■■■□□ 2.82
SSSCA1-207ENST00000533115 TMEM209Q96SK2 561 aa32.67■■■□□ 2.82
SSSCA1-207ENST00000533115 CORO1BQ9BR76 489 aa32.67■■■□□ 2.82
SSSCA1-207ENST00000533115 CLIC2O15247 247 aa32.66■■■□□ 2.82
SSSCA1-207ENST00000533115 PDGFBP01127 241 aaPredicted RBP32.66■■■□□ 2.82
SSSCA1-207ENST00000533115 TMEM191BP0C7N4 346 aa32.66■■■□□ 2.82
SSSCA1-207ENST00000533115 SLC5A9Q2M3M2 681 aa32.66■■■□□ 2.82
SSSCA1-207ENST00000533115 OR10T2Q8NGX3 314 aa32.66■■■□□ 2.82
SSSCA1-207ENST00000533115 CXorf38Q8TB03 319 aa32.66■■■□□ 2.82
SSSCA1-207ENST00000533115 MTMR12Q9C0I1 747 aa32.66■■■□□ 2.82
SSSCA1-207ENST00000533115 EXOC1Q9NV70 894 aa32.66■■■□□ 2.82
SSSCA1-207ENST00000533115 CGNQ9P2M7 1197 aaKnown RBP32.66■■■□□ 2.82
SSSCA1-207ENST00000533115 NUMBLQ9Y6R0 609 aa32.66■■■□□ 2.82
SSSCA1-207ENST00000533115 ZDBF2Q9HCK1 2354 aa32.65■■■□□ 2.82
SSSCA1-207ENST00000533115 NARSO43776 548 aaKnown RBP32.65■■■□□ 2.82
SSSCA1-207ENST00000533115 PSMD2Q13200 908 aa32.65■■■□□ 2.82
SSSCA1-207ENST00000533115 KNOP1Q1ED39 458 aaKnown RBP32.65■■■□□ 2.82
SSSCA1-207ENST00000533115 KMT5BQ4FZB7 885 aa32.65■■■□□ 2.82
SSSCA1-207ENST00000533115 WSCD1Q658N2 575 aa32.65■■■□□ 2.82
SSSCA1-207ENST00000533115 LMBRD2Q68DH5 695 aaPredicted RBP32.65■■■□□ 2.82
SSSCA1-207ENST00000533115 NPAS3Q8IXF0 933 aa32.65■■■□□ 2.82
SSSCA1-207ENST00000533115 THEM5Q8N1Q8 247 aa32.65■■■□□ 2.82
SSSCA1-207ENST00000533115 LRRC52Q8N7C0 313 aa32.65■■■□□ 2.82
SSSCA1-207ENST00000533115 FSIP1Q8NA03 581 aa32.65■■■□□ 2.82
SSSCA1-207ENST00000533115 ING5Q8WYH8 240 aa32.65■■■□□ 2.82
SSSCA1-207ENST00000533115 ANKRD36BP1Q96IX9 119 aa32.65■■■□□ 2.82
SSSCA1-207ENST00000533115 ZNF512Q96ME7 567 aaPredicted RBP32.65■■■□□ 2.82
SSSCA1-207ENST00000533115 GDPD2Q9HCC8 539 aa32.65■■■□□ 2.82
SSSCA1-207ENST00000533115 INTS13Q9NVM9 706 aa32.65■■■□□ 2.82
SSSCA1-207ENST00000533115 CEP72Q9P209 647 aa32.65■■■□□ 2.82
SSSCA1-207ENST00000533115 YIPF1Q9Y548 306 aa32.65■■■□□ 2.82
SSSCA1-207ENST00000533115 MTMR11A4FU01 709 aa32.64■■■□□ 2.82
SSSCA1-207ENST00000533115 CYP2J2P51589 502 aa32.64■■■□□ 2.82
SSSCA1-207ENST00000533115 RBP5P82980 135 aa32.64■■■□□ 2.82
SSSCA1-207ENST00000533115 STK4Q13043 487 aa32.64■■■□□ 2.82
SSSCA1-207ENST00000533115 DUSP4Q13115 394 aa32.64■■■□□ 2.82
SSSCA1-207ENST00000533115 SNRNP35Q16560 246 aaKnown RBP32.64■■■□□ 2.82
SSSCA1-207ENST00000533115 IQCEQ6IPM2 695 aa32.64■■■□□ 2.82
SSSCA1-207ENST00000533115 CENPPQ6IPU0 288 aa32.64■■■□□ 2.82
SSSCA1-207ENST00000533115 XXYLT1Q8NBI6 393 aa32.64■■■□□ 2.82
SSSCA1-207ENST00000533115 RDH13Q8NBN7 331 aa32.64■■■□□ 2.82
SSSCA1-207ENST00000533115 ST13P5Q8NFI4 369 aaPredicted RBP32.64■■■□□ 2.82
SSSCA1-207ENST00000533115 RTP3Q9BQQ7 232 aa32.64■■■□□ 2.82
SSSCA1-207ENST00000533115 KCNH6Q9H252 994 aa32.64■■■□□ 2.82
SSSCA1-207ENST00000533115 CRISPLD1Q9H336 500 aa32.64■■■□□ 2.82
SSSCA1-207ENST00000533115 SIX4Q9UIU6 781 aa32.64■■■□□ 2.82
SSSCA1-207ENST00000533115 PTPRJQ12913 1337 aa32.63■■■□□ 2.81
SSSCA1-207ENST00000533115 KRT19P08727 400 aa32.63■■■□□ 2.81
SSSCA1-207ENST00000533115 NUCB2P80303 420 aa32.63■■■□□ 2.81
SSSCA1-207ENST00000533115 PRSS36Q5K4E3 855 aa32.63■■■□□ 2.81
SSSCA1-207ENST00000533115 SCARA3Q6AZY7 606 aa32.63■■■□□ 2.81
SSSCA1-207ENST00000533115 PARM1Q6UWI2 310 aa32.63■■■□□ 2.81
SSSCA1-207ENST00000533115 MTSS1LQ765P7 747 aa32.63■■■□□ 2.81
SSSCA1-207ENST00000533115 C12orf56Q8IXR9 622 aa32.63■■■□□ 2.81
SSSCA1-207ENST00000533115 FGF14Q92915 247 aa32.63■■■□□ 2.81
SSSCA1-207ENST00000533115 ZCWPW1Q9H0M4 648 aa32.63■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms